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PDB: 187 results

4QGW
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Crystal sturcture of the R132K:R111L:L121D mutant of Cellular Retinoic Acid Binding ProteinII complexed with a synthetic ligand (Merocyanine) at 1.77 angstrom resolution
Descriptor: (2E,4E,6E)-3-methyl-6-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)hexa-2,4-dienal, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cellular retinoic acid-binding protein 2
Authors:Nosrati, M, Yapici, I, Geiger, J.H.
Deposit date:2014-05-26
Release date:2015-01-28
Last modified:2015-02-11
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:"Turn-on" protein fluorescence: in situ formation of cyanine dyes.
J.Am.Chem.Soc., 137, 2015
4QGX
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Crystal structure of the R132K:R111L:L121E mutant of Cellular Retinoic Acid Binding ProteinII complexed with a synthetic ligand (Merocyanine) at 1.47 angstrom resolution
Descriptor: (2E,4E,6E)-3-methyl-6-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)hexa-2,4-dienal, Cellular retinoic acid-binding protein 2
Authors:Nosrati, M, Yapici, I, Geiger, J.H.
Deposit date:2014-05-26
Release date:2015-01-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.471 Å)
Cite:"Turn-on" protein fluorescence: in situ formation of cyanine dyes.
J.Am.Chem.Soc., 137, 2015
4QGV
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Crystal structure of the R132K:R111L mutant of Cellular Retinoic Acid Binding ProteinII complexed with a synthetic ligand (Merocyanine) at 1.73 angstrom resolution.
Descriptor: (2E,4E,6E)-3-methyl-6-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)hexa-2,4-dienal, Cellular retinoic acid-binding protein 2
Authors:Nosrati, M, Yapici, I, Geiger, J.H.
Deposit date:2014-05-25
Release date:2015-01-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:"Turn-on" protein fluorescence: in situ formation of cyanine dyes.
J.Am.Chem.Soc., 137, 2015
3CR6
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BU of 3cr6 by Molmil
Crystal Structure of the R132K:R111L:A32E Mutant of Cellular Retinoic Acid Binding Protein Type II Complexed with C15-aldehyde (a retinal analog) at 1.22 Angstrom resolution.
Descriptor: 1,3,3-trimethyl-2-[(1E,3E)-3-methylpenta-1,3-dien-1-yl]cyclohexene, Cellular retinoic acid-binding protein 2
Authors:Jia, X, Geiger, J.H.
Deposit date:2008-04-04
Release date:2009-03-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Two distinctive orientations of binding determined by a single mutation in the CRABPII mutant-C15-aldehyde complexes
To be Published
3F8A
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Crystal Structure of the R132K:R111L:L121E:R59W Mutant of Cellular Retinoic Acid-Binding Protein Type II Complexed with C15-aldehyde (a retinal analog) at 1.95 Angstrom resolution.
Descriptor: 1,3,3-trimethyl-2-[(1E,3E)-3-methylpenta-1,3-dien-1-yl]cyclohexene, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cellular retinoic acid-binding protein 2
Authors:Jia, X, Geiger, J.H.
Deposit date:2008-11-12
Release date:2009-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Probing Wavelength Regulation with an Engineered Rhodopsin Mimic and a C15-Retinal Analogue
Chempluschem, 77, 2012
3FA6
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Crystal structure of the R132K:Y134F:R111L:L121D:T54V mutant of cellular retinoic acid-binding protein II complexed with C15-aldehyde (a retinal analog) at 1.54 angstrom resolution
Descriptor: 1,3,3-trimethyl-2-[(1E,3E)-3-methylpenta-1,3-dien-1-yl]cyclohexene, Cellular retinoic acid-binding protein 2
Authors:Jia, X, Geiger, J.H.
Deposit date:2008-11-15
Release date:2009-10-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Two distinctive orientations of binding determined by a single mutation in the CRABPII mutant-C15-aldehyde complexes
To be Published
3F9D
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BU of 3f9d by Molmil
Crystal structure of the R132K:R111L:T54E mutant of cellular retinoic acid-binding protein II complexed with C15-aldehyde (a retinal analog) at 2.00 angstrom resolution
Descriptor: 1,3,3-trimethyl-2-[(1E,3E)-3-methylpenta-1,3-dien-1-yl]cyclohexene, Cellular retinoic acid-binding protein 2
Authors:Jia, X, Geiger, J.H.
Deposit date:2008-11-13
Release date:2009-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two distinctive orientations of binding determined by a single mutation in the CRABPII mutant-C15-aldehyde complexes
To be Published
3D1J
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Crystal Structure of E.coli GS mutant dmGS(C7S;C408S)
Descriptor: Glycogen synthase
Authors:Sheng, F, Geiger, J.H.
Deposit date:2008-05-06
Release date:2009-03-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Crystal Structures of the Open and Catalytically Competent Closed Conformation of Escherichia coli Glycogen Synthase.
J.Biol.Chem., 284, 2009
3COP
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BU of 3cop by Molmil
Crystal Structure of E.coli GS mutant E377A in complex with ADP and acceptor analogue HEPPSO
Descriptor: (2R)-2-hydroxy-3-[4-(2-hydroxyethyl)piperazin-1-yl]propane-1-sulfonic acid, ADENOSINE-5'-DIPHOSPHATE, Glycogen synthase, ...
Authors:Sheng, F, Geiger, J.H.
Deposit date:2008-03-28
Release date:2009-03-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Crystal Structures of the Open and Catalytically Competent Closed Conformation of Escherichia coli Glycogen Synthase.
J.Biol.Chem., 284, 2009
4ZJZ
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Crystal structure of a benzoate coenzyme A ligase with Benzoyl-AMP
Descriptor: 5'-O-[(R)-(benzoyloxy)(hydroxy)phosphoryl]adenosine, BENZOIC ACID, Benzoate-coenzyme A ligase, ...
Authors:Strom, S, Nosrati, M, Thornburg, C, Walker, K.D, Geiger, J.H.
Deposit date:2015-04-29
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.
Biochemistry, 54, 2015
4RLQ
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Crystal structure of a benzoate coenzyme A ligase with o-Toluic acid
Descriptor: 2-methylbenzoic acid, Benzoate-coenzyme A ligase, GLYCEROL
Authors:Strom, S, Nosrati, M, Thornburg, C, Walker, K.D, Geiger, J.H.
Deposit date:2014-10-17
Release date:2015-09-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.
Biochemistry, 54, 2015
5E70
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BU of 5e70 by Molmil
Crystal structure of Ecoli Branching Enzyme with gamma cyclodextrin
Descriptor: 1,4-alpha-glucan branching enzyme GlgB, Cyclooctakis-(1-4)-(alpha-D-glucopyranose), GLYCEROL
Authors:Feng, L, Nosrati, M, Geiger, J.H.
Deposit date:2015-10-11
Release date:2015-12-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structures of Escherichia coli branching enzyme in complex with cyclodextrins.
Acta Crystallogr D Struct Biol, 72, 2016
4RLF
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Crystal structure of a benzoate coenzyme A ligase with p-Toluic acid and o-Toluic acid
Descriptor: 2-methylbenzoic acid, 4-METHYLBENZOIC ACID, Benzoate-coenzyme A ligase, ...
Authors:Strom, S, Nosrati, M, Thornburg, C, Walker, K, Geiger, J.H.
Deposit date:2014-10-16
Release date:2015-09-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.
Biochemistry, 54, 2015
4RMN
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BU of 4rmn by Molmil
Crystal structure of a benzoate coenzyme A ligase with 2-Thiophene Carboxylic acid
Descriptor: Benzoate-coenzyme A ligase, GLYCEROL, THIOPHENE-2-CARBOXYLIC ACID
Authors:Strom, S, Nosrati, M, Thornburg, C, Walker, K.D, Geiger, J.H.
Deposit date:2014-10-21
Release date:2015-09-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.
Biochemistry, 54, 2015
3CX4
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BU of 3cx4 by Molmil
Crystal Structure of E.coli GS mutant E377A in complex with ADP and oligosaccharides
Descriptor: (2R)-2-hydroxy-3-[4-(2-hydroxyethyl)piperazin-1-yl]propane-1-sulfonic acid, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Sheng, F, Geiger, J.H.
Deposit date:2008-04-23
Release date:2009-04-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Oligosaccharide binding in Escherichia coli glycogen synthase.
Biochemistry, 48, 2009
5DPQ
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Crystal Structure of E72A mutant of domain swapped dimer Human Cellular Retinol Binding Protein
Descriptor: ACETATE ION, Retinol-binding protein 2
Authors:Assar, Z, Nossoni, Z, Wang, W, Geiger, J.H, Borhan, B.
Deposit date:2015-09-14
Release date:2016-09-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.775 Å)
Cite:Domain-Swapped Dimers of Intracellular Lipid-Binding Proteins: Evidence for Ordered Folding Intermediates.
Structure, 24, 2016
5E6Z
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BU of 5e6z by Molmil
Crystal structure of Ecoli Branching Enzyme with beta cyclodextrin
Descriptor: 1,4-alpha-glucan branching enzyme GlgB, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), GLYCEROL
Authors:Feng, L, Nosrati, M, Geiger, J.H.
Deposit date:2015-10-11
Release date:2015-12-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.878 Å)
Cite:Crystal structures of Escherichia coli branching enzyme in complex with cyclodextrins.
Acta Crystallogr D Struct Biol, 72, 2016
5E6Y
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BU of 5e6y by Molmil
Crystal structure of E.Coli branching enzyme in complex with alpha cyclodextrin
Descriptor: 1,4-alpha-glucan branching enzyme GlgB, Cyclohexakis-(1-4)-(alpha-D-glucopyranose), GLYCEROL
Authors:Feng, L, Nosrati, M, Geiger, J.H.
Deposit date:2015-10-11
Release date:2015-12-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of Escherichia coli branching enzyme in complex with cyclodextrins.
Acta Crystallogr D Struct Biol, 72, 2016
3FEP
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BU of 3fep by Molmil
Crystal structure of the R132K:R111L:L121E:R59W-CRABPII mutant complexed with a synthetic ligand (merocyanin) at 2.60 angstrom resolution.
Descriptor: (2E,4E,6E)-3-methyl-6-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)hexa-2,4-dienal, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cellular retinoic acid-binding protein 2
Authors:Jia, X, Geiger, J.H.
Deposit date:2008-11-30
Release date:2009-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:"Turn-on" protein fluorescence: in situ formation of cyanine dyes.
J.Am.Chem.Soc., 137, 2015
4RM3
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BU of 4rm3 by Molmil
Crystal structure of a benzoate coenzyme A ligase with 2-Furoic acid
Descriptor: 2-FUROIC ACID, Benzoate-coenzyme A ligase
Authors:Strom, S, Nosrati, M, Thornburg, C, Walker, K.D, Geiger, J.H.
Deposit date:2014-10-18
Release date:2015-09-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.
Biochemistry, 54, 2015
4RUU
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BU of 4ruu by Molmil
Crystal structure of the Q108K:K40L mutant of human Cellular Retinol Binding ProteinII in complex with All-trans-Retinal after 24 hour incubation at 1.4 Angstrom Resolution
Descriptor: ACETATE ION, RETINAL, Retinol-binding protein 2
Authors:Nosrati, M, Geiger, J.H.
Deposit date:2014-11-21
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Tuning the electronic absorption of protein-embedded all-trans-retinal.
Science, 338, 2012
4RM2
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Crystal structure of a benzoate coenzyme A ligase with 2-Fluoro benzoic acid
Descriptor: 2-fluorobenzoic acid, Benzoate-coenzyme A ligase
Authors:Strom, S, Nosrati, M, Thornburg, C, Walker, K.D, Geiger, J.H.
Deposit date:2014-10-18
Release date:2015-09-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Kinetically and Crystallographically Guided Mutations of a Benzoate CoA Ligase (BadA) Elucidate Mechanism and Expand Substrate Permissivity.
Biochemistry, 54, 2015
6MOW
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BU of 6mow by Molmil
Crystal Structure of the apo R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121Q mutant of Human Cellular Retinoic Acid Binding Protein II at 2.3 Angstrom Resolution
Descriptor: Cellular retinoic acid-binding protein 2
Authors:Ghanbarpour, A, Geiger, J.
Deposit date:2018-10-04
Release date:2019-10-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.354 Å)
Cite:Crystal Structure of the apo R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121Q mutant of Human Cellular Retinoic Acid Binding Protein II at 2.3 Angstrom Resolution
To Be Published
6NOE
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Crystal Structure of the All-Trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E:I63D Mutant of Human Cellular Retinoic Acid Binding Protein II in the Dark at 1.97 Angstrom Resolution
Descriptor: Cellular retinoic acid-binding protein 2, RETINAL
Authors:Ghanbarpour, A, Geiger, J.
Deposit date:2019-01-16
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.969 Å)
Cite:Crystal Structure of the All-Trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E:I63D Mutant of Human Cellular Retinoic Acid Binding Protein II in the Dark at 1.97 Angstrom Resolution
To Be Published
6NNX
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Crystal Structure of the All-Trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121M Mutant of Human Cellular Retinoic Acid Binding Protein II in the Dark at 1.87 Angstrom Resolution
Descriptor: Cellular retinoic acid-binding protein 2, RETINAL
Authors:Ghanbarpour, A, Geiger, J.
Deposit date:2019-01-15
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal Structure of the All-Trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121M Mutant of Human Cellular Retionic Acid Binding Protein II in the Dark at 1.87 Angstrom Resolution
To Be Published

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PDB entries from 2024-05-15

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