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PDB: 74 results
4V8U
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BU of 4v8u by Molmil
Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.
Descriptor: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Gao, Y.G, Feng, S, Chen, Y.
Deposit date:2012-08-28
Release date:2014-07-09
Last modified:2019-10-30
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal structure of 70S ribosome with both cognate tRNAs in the E and P sites representing an authentic elongation complex.
PLoS ONE, 8, 2013
1O56
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BU of 1o56 by Molmil
MOLECULAR STRUCTURE OF TWO CRYSTAL FORMS OF CYCLIC TRIADENYLIC ACID AT 1 ANGSTROM RESOLUTION
Descriptor: DNA (5'-CD(*AP*AP*AP*)-3')
Authors:Gao, Y.G, Robinson, H, Guan, Y, Liaw, Y.C, van Boom, J.H, van der Marel, G.A, Wang, A.H.
Deposit date:2003-08-20
Release date:2003-08-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Molecular structure of two crystal forms of cyclic triadenylic acid at 1A resolution.
J.Biomol.Struct.Dyn., 16, 1998
1O55
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BU of 1o55 by Molmil
MOLECULAR STRUCTURE OF TWO CRYSTAL FORMS OF CYCLIC TRIADENYLIC ACID AT 1 ANGSTROM RESOLUTION
Descriptor: COBALT (II) ION, DNA (5'-CD(*AP*AP*AP)-3')
Authors:Gao, Y.G, Robinson, H, Guan, Y, Liaw, Y.C, van Boom, J.H, van der Marel, G.A, Wang, A.H.
Deposit date:2003-08-20
Release date:2003-08-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Molecular structure of two crystal forms of cyclic triadenylic acid at 1A resolution.
J.Biomol.Struct.Dyn., 16, 1998
1WY7
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BU of 1wy7 by Molmil
crystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshii
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, hypothetical protein PH1948
Authors:Gao, Y.G, Yao, M, Tanaka, I.
Deposit date:2005-02-08
Release date:2005-12-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the putative RNA methyltransferase PH1948 from Pyrococcus horikoshii, in complex with the copurified S-adenosyl-L-homocysteine
Proteins, 61, 2005
2MDC
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BU of 2mdc by Molmil
Solution structure of the WW domain of HYPB
Descriptor: Histone-lysine N-methyltransferase SETD2
Authors:Gao, Y.G.
Deposit date:2013-09-10
Release date:2014-09-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Autoinhibitory structure of the WW domain of HYPB/SETD2 regulates its interaction with the proline-rich region of huntingtin
Structure, 22, 2014
2MDI
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BU of 2mdi by Molmil
Solution structure of the PP2WW mutant (KPP2WW) of HYPB
Descriptor: Histone-lysine N-methyltransferase SETD2
Authors:Gao, Y.G, Hu, H.Y.
Deposit date:2013-09-10
Release date:2014-09-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Autoinhibitory structure of the WW domain of HYPB/SETD2 regulates its interaction with the proline-rich region of huntingtin.
Structure, 22, 2014
2DI3
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BU of 2di3 by Molmil
Crystal structure of the transcriptional factor CGL2915 from Corynebacterium glutamicum
Descriptor: Bacterial regulatory proteins, GntR family, ZINC ION
Authors:Gao, Y.G, Yao, M, Tanaka, I.
Deposit date:2006-03-28
Release date:2007-03-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and functional characterization of the LldR from Corynebacterium glutamicum: a transcriptional repressor involved in L-lactate and sugar utilization
Nucleic Acids Res., 36, 2008
2EK5
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BU of 2ek5 by Molmil
Crystal structure of the transcriptional factor from C.glutamicum at 2.2 angstrom resolution
Descriptor: Predicted transcriptional regulators
Authors:Gao, Y.G, Yao, M, Tanaka, I.
Deposit date:2007-03-22
Release date:2007-09-18
Last modified:2020-09-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structures of transcription factor CGL2947 from Corynebacterium glutamicum in two crystal forms: A novel homodimer assembling and the implication for effector-binding mode
Protein Sci., 16, 2007
2EW3
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BU of 2ew3 by Molmil
Solution Structure Of The SH3 Domain Of Human SH3GL3
Descriptor: SH3-containing GRB2-like protein 3
Authors:Gao, Y.G, Yan, X.Z, Hu, H.Y.
Deposit date:2005-11-02
Release date:2006-11-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural Basis for the Binding Specificities of Huntingtin Proline-Rich Region with SH3 and WW Domains
To be Published
3IN0
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BU of 3in0 by Molmil
Crystal structure of the F114P/M121Q variant of Pseudomonas aeruginosa azurin in the Cu(II) state
Descriptor: Azurin, COPPER (II) ION
Authors:Gao, Y.G, Robinson, H.
Deposit date:2009-08-11
Release date:2009-10-27
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Rationally tuning the reduction potential of a single cupredoxin beyond the natural range.
Nature, 462, 2009
3IN2
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BU of 3in2 by Molmil
Crystal structure of the N47S/M121L variant of Pseudomonas aeruginosa azurin in the Cu(II) state
Descriptor: Azurin, COPPER (II) ION
Authors:Gao, Y.G, Robinson, H.
Deposit date:2009-08-11
Release date:2009-11-17
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Rationally tuning the reduction potential of a single cupredoxin beyond the natural range.
Nature, 462, 2009
3JT2
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BU of 3jt2 by Molmil
Cu(II) N47S/M121L variant of Pseudomonas Aeruginosa azurin
Descriptor: Azurin, COPPER (II) ION
Authors:Gao, Y.G, Robinson, H.
Deposit date:2009-09-11
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Rationally tuning the reduction potential of a single cupredoxin beyond the natural range.
Nature, 462, 2009
3JTB
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BU of 3jtb by Molmil
Cu(II) N47S/F114N variant of Pseudomonas Aeruginosa Azurin
Descriptor: Azurin, COPPER (II) ION
Authors:Gao, Y.G, Robinson, H.
Deposit date:2009-09-11
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rationally tuning the reduction potential of a single cupredoxin beyond the natural range.
Nature, 462, 2009
441D
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BU of 441d by Molmil
HIGH RESOLUTION A-DNA CRYSTAL STRYCTURES OF D(AGGGGCCCCT): AN A-DNA MODEL OF POLY(DG).POLY(DC)
Descriptor: DNA (5'-D(*AP*GP*GP*GP*GP*CP*CP*CP*CP*T)-3')
Authors:Gao, Y.G, Robinson, H.H, Wang, A.H.
Deposit date:1999-01-13
Release date:1999-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-resolution A-DNA crystal structures of d(AGGGGCCCCT). An A-DNA model of poly(dG) x poly(dC).
Eur.J.Biochem., 261, 1999
2E8G
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BU of 2e8g by Molmil
The structure of protein from P. horikoshii at 1.7 angstrom resolution
Descriptor: Hypothetical protein PH0536
Authors:Gao, Y.G, Yao, M, Tanaka, I.
Deposit date:2007-01-19
Release date:2008-01-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of protein PH0536 from Pyrococcus horikoshii at 1.7 A resolution reveals a novel assembly of an oligonucleotide/oligosaccharide-binding fold and an alpha-helical bundle
Proteins, 71, 2008
6RJK
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BU of 6rjk by Molmil
Structure of virulence factor SghA from Agrobacterium tumefaciens
Descriptor: Beta-glucosidase
Authors:Ye, F.Z, Wang, C, Chang, C.Q, Zhang, L.H, Gao, Y.G.
Deposit date:2019-04-27
Release date:2019-10-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.922 Å)
Cite:Agrobacteria reprogram virulence gene expression by controlled release of host-conjugated signals.
Proc.Natl.Acad.Sci.USA, 116, 2019
4V90
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BU of 4v90 by Molmil
Thermus thermophilus Ribosome
Descriptor: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Chen, Y, Feng, S, Kumar, V, Ero, R, Gao, Y.G.
Deposit date:2014-02-22
Release date:2014-07-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of EF-G-ribosome complex in a pretranslocation state.
Nat. Struct. Mol. Biol., 20, 2013
6IEJ
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BU of 6iej by Molmil
The C2 domain of cytosolic phospholipase A2 alpha bound to phosphatidylcholine
Descriptor: 1,2-dihexanoyl-sn-glycero-3-phosphocholine, CALCIUM ION, Cytosolic phospholipase A2, ...
Authors:Hirano, Y, Gao, Y.G, Stephenson, D.J, Vu, N.T, Malinina, L, Chalfant, C.E, Patel, D.J, Brown, R.E.
Deposit date:2018-09-14
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.206 Å)
Cite:Structural basis of phosphatidylcholine recognition by the C2-domain of cytosolic phospholipase A2alpha.
Elife, 8, 2019
6IUY
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BU of 6iuy by Molmil
Structure of DsGPDH of Dunaliella salina
Descriptor: 1,3-DIHYDROXYACETONEPHOSPHATE, GLYCEROL, Glycerol-3-phosphate dehydrogenase [NAD(+)], ...
Authors:He, Q, Toh, J.D, Ero, R, Qiao, Z, Kumar, V, Gao, Y.G.
Deposit date:2018-12-01
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The unusual di-domain structure of Dunaliella salina glycerol-3-phosphate dehydrogenase enables direct conversion of dihydroxyacetone phosphate to glycerol.
Plant J., 102, 2020
2ZDS
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BU of 2zds by Molmil
Crystal Structure of SCO6571 from Streptomyces coelicolor A3(2)
Descriptor: Putative DNA-binding protein
Authors:Begum, P, Gao, Y.G, Sakai, N, Yao, M, Watanabe, N, Tanaka, I.
Deposit date:2007-11-27
Release date:2008-12-02
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of SCO6571 from Streptomyces coelicolor A3(2).
Protein Pept.Lett., 15, 2008
6RK2
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BU of 6rk2 by Molmil
Complex structure of virulence factor SghA mutant with its substrate SAG
Descriptor: 2-(alpha-L-altropyranosyloxy)benzoic acid, Beta-glucosidase
Authors:Ye, F.Z, Wang, C, Chang, C.Q, Zhang, L.H, Gao, Y.G.
Deposit date:2019-04-30
Release date:2019-10-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Agrobacteria reprogram virulence gene expression by controlled release of host-conjugated signals.
Proc.Natl.Acad.Sci.USA, 116, 2019
6RJM
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BU of 6rjm by Molmil
Complex structure of virulence factor SghA and its hydrolysis product glucose
Descriptor: Beta-glucosidase, alpha-D-glucopyranose
Authors:Ye, F.Z, Wang, C, Chang, C.Q, Zhang, L.H, Gao, Y.G.
Deposit date:2019-04-27
Release date:2019-10-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.112 Å)
Cite:Agrobacteria reprogram virulence gene expression by controlled release of host-conjugated signals.
Proc.Natl.Acad.Sci.USA, 116, 2019
6RJO
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BU of 6rjo by Molmil
Complex structure of virulence factor SghA with its substrate analog salicin
Descriptor: 2-(hydroxymethyl)phenyl beta-D-glucopyranoside, Beta-glucosidase
Authors:Ye, F.Z, Wang, C, Chang, C.Q, Zhang, L.H, Gao, Y.G.
Deposit date:2019-04-28
Release date:2019-10-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.804 Å)
Cite:Agrobacteria reprogram virulence gene expression by controlled release of host-conjugated signals.
Proc.Natl.Acad.Sci.USA, 116, 2019
2OPM
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BU of 2opm by Molmil
Human Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-461
Descriptor: 3-FLUORO-1-(2-HYDROXY-2,2-DIPHOSPHONOETHYL)PYRIDINIUM, Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)], MAGNESIUM ION, ...
Authors:Cao, R, Gao, Y.G, Robinson, H, Goddard, A.
Deposit date:2007-01-29
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Lipophilic bisphosphonates as dual farnesyl/geranylgeranyl diphosphate synthase inhibitors: an X-ray and NMR investigation.
J.Am.Chem.Soc., 131, 2009
2OPN
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BU of 2opn by Molmil
Human Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-527
Descriptor: Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)], MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Cao, R, Gao, Y.G, Robinson, H, Goddard, A, Oldfield, E.
Deposit date:2007-01-29
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Bisphosphonates: Teaching Old Drugs with New Tricks
To be Published

 

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