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PDB: 83 results

5O6A
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The cryo-EM structure of Tick-borne encephalitis virus mature particle
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein, Small envelope protein M
Authors:Fuzik, T, Plevka, P.
Deposit date:2017-06-06
Release date:2018-02-07
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of tick-borne encephalitis virus and its neutralization by a monoclonal antibody.
Nat Commun, 9, 2018
5O6V
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The cryo-EM structure of Tick-borne encephalitis virus complexed with Fab fragment of neutralizing antibody 19/1786
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein, Fab 19/1786 - Heavy chain, ...
Authors:Fuzik, T, Plevka, P.
Deposit date:2017-06-07
Release date:2018-02-07
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of tick-borne encephalitis virus and its neutralization by a monoclonal antibody.
Nat Commun, 9, 2018
7OZK
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BU of 7ozk by Molmil
CryoEM structure of human enterovirus 70 in complex with Pleconaril
Descriptor: 3-{3,5-DIMETHYL-4-[3-(3-METHYL-ISOXAZOL-5-YL)-PROPOXY]-PHENYL}-5-TRIFLUOROMETHYL-[1,2,4]OXADIAZOLE, Capsid protein VP1, Capsid protein VP2, ...
Authors:Fuzik, T, Plevka, P, Moravcova, J.
Deposit date:2021-06-28
Release date:2022-07-27
Last modified:2022-09-28
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:Structure of Human Enterovirus 70 and Its Inhibition by Capsid-Binding Compounds.
J.Virol., 96, 2022
7OZL
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CryoEM structure of human enterovirus 70 in complex with WIN51711
Descriptor: 5-(7-(4-(4,5-DIHYDRO-2-OXAZOLYL)PHENOXY)HEPTYL)-3-METHYL ISOXAZOLE, Capsid protein VP1, Capsid protein VP2, ...
Authors:Fuzik, T, Plevka, P, Moravcova, J.
Deposit date:2021-06-28
Release date:2022-07-27
Last modified:2022-09-28
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Structure of Human Enterovirus 70 and Its Inhibition by Capsid-Binding Compounds.
J.Virol., 96, 2022
7OPX
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BU of 7opx by Molmil
CryoEM structure of human enterovirus 70 native virion
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Fuzik, T, Plevka, P, Moravcova, J.
Deposit date:2021-06-02
Release date:2022-06-22
Last modified:2022-09-28
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:Structure of Human Enterovirus 70 and Its Inhibition by Capsid-Binding Compounds.
J.Virol., 96, 2022
7OZJ
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BU of 7ozj by Molmil
CryoEM structure of human enterovirus 70 empty particle
Descriptor: VP1, VP2, VP3
Authors:Fuzik, T, Plevka, P, Moravcova, J.
Deposit date:2021-06-28
Release date:2022-07-13
Last modified:2022-09-28
Method:ELECTRON MICROSCOPY (4.29 Å)
Cite:Structure of Human Enterovirus 70 and Its Inhibition by Capsid-Binding Compounds.
J.Virol., 96, 2022
7OZI
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BU of 7ozi by Molmil
CryoEM structure of human enterovirus 70 A-particle
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3
Authors:Fuzik, T, Plevka, P, Moravcova, J.
Deposit date:2021-06-28
Release date:2022-07-13
Last modified:2022-09-28
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Structure of Human Enterovirus 70 and Its Inhibition by Capsid-Binding Compounds.
J.Virol., 96, 2022
6HBK
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BU of 6hbk by Molmil
Echovirus 18 Open particle without one pentamer
Descriptor: Echovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3
Authors:Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
Deposit date:2018-08-10
Release date:2019-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
6Q3G
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BU of 6q3g by Molmil
Structure of native bacteriophage P68
Descriptor: Arstotzka protein, Head fiber protein, Inner core protein, ...
Authors:Dominik, H, Karel, S, Fuzik, T, Plevka, P.
Deposit date:2018-12-04
Release date:2019-11-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
6HHT
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BU of 6hht by Molmil
Echovirus 18 Open particle without two pentamers
Descriptor: Echovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3
Authors:Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
Deposit date:2018-08-29
Release date:2019-03-20
Last modified:2019-04-10
Method:ELECTRON MICROSCOPY (4.05 Å)
Cite:Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
6Y83
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BU of 6y83 by Molmil
Capsid structure of Leishmania RNA virus 1
Descriptor: Capsid protein
Authors:Prochazkova, M, Fuzik, T, Grybtchuk, D, Falginella, F, Podesvova, L, Yurchenko, V, Vacha, R, Plevka, P.
Deposit date:2020-03-03
Release date:2020-11-11
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Capsid Structure of Leishmania RNA Virus 1.
J.Virol., 95, 2021
7Z46
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BU of 7z46 by Molmil
Top part (C5) of bacteriophage SU10 capsid
Descriptor: Major head protein
Authors:Siborova, M, Fuzik, T, Prochazkova, M, Novacek, J, Plevka, P.
Deposit date:2022-03-03
Release date:2022-08-24
Last modified:2022-10-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Tail proteins of phage SU10 reorganize into the nozzle for genome delivery.
Nat Commun, 13, 2022
6HBJ
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BU of 6hbj by Molmil
Echovirus 18 empty particle
Descriptor: Viral protein 1, Viral protein 2, Viral protein 3
Authors:Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
Deposit date:2018-08-10
Release date:2019-03-20
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
7Z45
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BU of 7z45 by Molmil
Central part (C10) of bacteriophage SU10 capsid
Descriptor: Major head protein
Authors:Siborova, M, Fuzik, T, Prochazkova, M, Novacek, J, Plevka, P.
Deposit date:2022-03-03
Release date:2022-08-24
Last modified:2022-10-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Tail proteins of phage SU10 reorganize into the nozzle for genome delivery.
Nat Commun, 13, 2022
7Z49
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BU of 7z49 by Molmil
The capsid of bacteriophage SU10.
Descriptor: Major head protein
Authors:Siborova, M, Fuzik, T, Prochazkova, M, Novacek, J, Plevka, P.
Deposit date:2022-03-03
Release date:2022-10-05
Last modified:2023-04-19
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Tail proteins of phage SU10 reorganize into the nozzle for genome delivery.
Nat Commun, 13, 2022
7Z4B
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BU of 7z4b by Molmil
Bacteriophage SU10 virion (C1)
Descriptor: Adaptor, Major head protein, Portal protein, ...
Authors:Siborova, M, Fuzik, T, Prochazkova, M, Novacek, J, Plevka, P.
Deposit date:2022-03-03
Release date:2022-12-28
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Tail proteins of phage SU10 reorganize into the nozzle for genome delivery.
Nat Commun, 13, 2022
6HBH
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BU of 6hbh by Molmil
Echovirus 18 A-particle
Descriptor: Echovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3
Authors:Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
Deposit date:2018-08-10
Release date:2019-03-20
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
6IB1
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BU of 6ib1 by Molmil
Icosahedrally averaged capsid of empty particle of bacteriophage P68
Descriptor: Major head protein, Uncharacterized protein
Authors:Hrebik, D, Skubnik, K, Fuzik, T, Plevka, P.
Deposit date:2018-11-28
Release date:2019-11-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
7ZE1
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BU of 7ze1 by Molmil
Tribolium castaneum hexamerin 2
Descriptor: Larval serum protein 1 gamma chain-like Protein
Authors:Valentova, L, Fuzik, T, Plevka, P.
Deposit date:2022-03-30
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Polyelectrolyte coating of cryo-EM grids improves lateral distribution and prevents aggregation of macromolecules.
Acta Crystallogr D Struct Biol, 78, 2022
7ZUF
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BU of 7zuf by Molmil
Saccharomyces cerevisiae L-BC virus, open particle, C5 reconstruction
Descriptor: Major capsid protein
Authors:Grybchuk, D, Prochazkova, M, Fuzik, T, Konovalovas, A, Serva, S, Yurchenko, V, Plevka, P.
Deposit date:2022-05-12
Release date:2022-09-07
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Structures of L-BC virus and its open particle provide insight into Totivirus capsid assembly.
Commun Biol, 5, 2022
5G52
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BU of 5g52 by Molmil
Crystallographic structure of full particle of Deformed Wing Virus
Descriptor: URIDINE-5'-MONOPHOSPHATE, VP1, VP2, ...
Authors:Skubnik, K, Novacek, J, Fuzik, T, Pridal, A, Paxton, R, Plevka, P.
Deposit date:2016-05-18
Release date:2017-03-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.802 Å)
Cite:Structure of deformed wing virus, a major honey bee pathogen.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5G51
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BU of 5g51 by Molmil
High resolution structure of the part of VP3 protein of Deformed Wing Virus forming P-domain
Descriptor: DWV-VP3-P-DOMAIN
Authors:Skubnik, K, Novacek, J, Fuzik, T, Pridal, A, Paxton, R, Plevka, P.
Deposit date:2016-05-18
Release date:2017-03-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of deformed wing virus, a major honey bee pathogen.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7ZTS
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BU of 7zts by Molmil
Saccharomyces cerevisiae L-BC virus, open particle, asymmetric reconstruction
Descriptor: Major capsid protein
Authors:Grybchuk, D, Prochazkova, M, Fuzik, T, Konovalovas, A, Serva, S, Yurchenko, V, Plevka, P.
Deposit date:2022-05-11
Release date:2022-09-21
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Structures of L-BC virus and its open particle provide insight into Totivirus capsid assembly.
Commun Biol, 5, 2022
6HBL
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BU of 6hbl by Molmil
Echovirus 18 Open particle without three pentamers
Descriptor: Echovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3
Authors:Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
Deposit date:2018-08-10
Release date:2019-03-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
8QO1
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BU of 8qo1 by Molmil
Asymmetric structure of the Borrelia bacteriophage BB1 procapsid, 3D class 3
Descriptor: Cytosolic protein, DUF228 domain-containing protein, Decoration protein P03, ...
Authors:Rumnieks, J, Fuzik, T, Tars, K.
Deposit date:2023-10-11
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (9.76 Å)
Cite:Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023

 

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