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PDB: 425 results

6ZCZ
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BU of 6zcz by Molmil
Crystal structure of receptor binding domain of SARS-CoV-2 Spike glycoprotein in ternary complex with EY6A Fab and a nanobody.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, EY6A heavy chain, ...
Authors:Zhou, D, Zhao, Y, Fry, E.E, Ren, J, Stuart, D.I.
Deposit date:2020-06-12
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis for the neutralization of SARS-CoV-2 by an antibody from a convalescent patient.
Nat.Struct.Mol.Biol., 27, 2020
2OHV
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BU of 2ohv by Molmil
Structural Basis for Glutamate Racemase Inhibition
Descriptor: (4S)-4-(2-NAPHTHYLMETHYL)-D-GLUTAMIC ACID, Glutamate Racemase
Authors:Kim, E.E.
Deposit date:2007-01-10
Release date:2007-09-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for glutamate racemase inhibition
J.Mol.Biol., 372, 2007
2OKL
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BU of 2okl by Molmil
Crystal structure of Peptide Deformylase 2 with actinonin from Bacillus cereus
Descriptor: ACTINONIN, CITRIC ACID, Peptide deformylase 2, ...
Authors:Kim, E.E.
Deposit date:2007-01-17
Release date:2008-01-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Characterization of Peptide Deformylase2 from B. cereus
J.Biochem.Mol.Biol., 40, 2007
2OEO
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BU of 2oeo by Molmil
Cryogenic crystal structure of Staphylococcal Nuclease variant truncated Delta+PHS I92D
Descriptor: CALCIUM ION, Staphylococcal thermonuclease, THYMIDINE-3',5'-DIPHOSPHATE
Authors:Reynald, R.L, Lattman, E.E, Gittis, A.G.
Deposit date:2006-12-30
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Buried Charges and Water in the Protein Interior: Reality or Fiction?
To be Published
2OHG
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BU of 2ohg by Molmil
Structural Basis for Glutamte Racemase Inhibition
Descriptor: Glutamate racemase
Authors:Kim, E.E.
Deposit date:2007-01-10
Release date:2007-09-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for glutamate racemase inhibition
J.Mol.Biol., 372, 2007
2OS1
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BU of 2os1 by Molmil
Structures of actinonin bound peptide deformylases from E. faecalis and S. pyogenes
Descriptor: ACTINONIN, NICKEL (II) ION, Peptide deformylase, ...
Authors:Kim, E.E, Kim, K.-H, Moon, J.H, Choi, K, Lee, H.K, Park, H.S.
Deposit date:2007-02-05
Release date:2008-03-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structures of actinonin bound peptide deformylases from E. faecalis and S. pyogenes
To be Published
2OS3
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BU of 2os3 by Molmil
Structures of actinonin bound peptide deformylases from E. faecalis and S. pyogenes
Descriptor: ACTINONIN, COBALT (II) ION, Peptide deformylase
Authors:Kim, E.E, Kim, K.-H, Moon, J.H, Choi, K, Lee, H.K, Parh, H.S.
Deposit date:2007-02-05
Release date:2008-03-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structures of actinonin bound peptide deformylases from E. faecalis and S. pyogenes
To be Published
2OS0
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BU of 2os0 by Molmil
Structures of actinonin bound peptide deformylases from E. faecalis and S. pyogenes
Descriptor: NICKEL (II) ION, Peptide deformylase, SULFATE ION
Authors:Kim, E.E, Kim, K.-H, Moon, J.H, Choi, K, Lee, H.K, Park, H.S.
Deposit date:2007-02-05
Release date:2008-03-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structures of actinonin bound peptide deformylases from E. faecalis and S. pyogenes
To be Published
2P85
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BU of 2p85 by Molmil
Structure of Human Lung Cytochrome P450 2A13 with indole bound in two alternate conformations
Descriptor: Cytochrome P450 2A13, INDOLE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Scott, E.E, Stout, C.D.
Deposit date:2007-03-21
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of the human lung cytochrome P450 2A13.
J.Biol.Chem., 282, 2007
2PRF
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BU of 2prf by Molmil
THREE DIMENSIONAL SOLUTION STRUCTURE OF ACANTHAMOEBA PROFILIN I
Descriptor: PROFILIN IA
Authors:Archer, S.J, Vinson, V.K, Pollard, T.D, Lattman, E.E, Torchia, D.A.
Deposit date:1994-01-12
Release date:1994-05-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of Acanthamoeba profilin-I.
J.Cell Biol., 122, 1993
2RNS
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BU of 2rns by Molmil
REFINEMENT OF THE CRYSTAL STRUCTURE OF RIBONUCLEASE S. COMPARISON WITH AND BETWEEN THE VARIOUS RIBONUCLEASE A STRUCTURES
Descriptor: RIBONUCLEASE S, SULFATE ION
Authors:Kim, E.E, Varadarajan, R, Wyckoff, H.W, Richards, F.M.
Deposit date:1992-02-19
Release date:1994-01-31
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Refinement of the crystal structure of ribonuclease S. Comparison with and between the various ribonuclease A structures.
Biochemistry, 31, 1992
2SNM
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BU of 2snm by Molmil
IN A STAPHYLOCOCCAL NUCLEASE MUTANT THE SIDE-CHAIN of A LYSINE REPLACING VALINE 66 IS FULLY BURIED IN THE HYDROPHOBIC CORE
Descriptor: CALCIUM ION, STAPHYLOCOCCAL NUCLEASE, THYMIDINE-3',5'-DIPHOSPHATE
Authors:Stites, W.E, Gittis, A.G, Lattman, E.E, Shortle, D.
Deposit date:1991-04-03
Release date:1993-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:In a staphylococcal nuclease mutant the side-chain of a lysine replacing valine 66 is fully buried in the hydrophobic core.
J.Mol.Biol., 221, 1991
3NWA
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BU of 3nwa by Molmil
Glycoprotein B from Herpes simplex virus type 1, W174R mutant, low-pH
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein B, MESO-ERYTHRITOL
Authors:Stampfer, S.D, Lou, H, Cohen, G.H, Eisenberg, R.J, Heldwein, E.E.
Deposit date:2010-07-09
Release date:2010-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2629 Å)
Cite:Structural basis of local, pH-dependent conformational changes in glycoprotein B from herpes simplex virus type 1.
J.Virol., 84, 2010
3NWF
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BU of 3nwf by Molmil
Glycoprotein B from Herpes simplex virus type 1, low-pH
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein B, MESO-ERYTHRITOL, ...
Authors:Stampfer, S.D, Lou, H, Cohen, G.H, Eisenberg, R.J, Heldwein, E.E.
Deposit date:2010-07-09
Release date:2010-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of local, pH-dependent conformational changes in glycoprotein B from herpes simplex virus type 1.
J.Virol., 84, 2010
3NW8
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BU of 3nw8 by Molmil
Glycoprotein B from Herpes simplex virus type 1, Y179S mutant, high-pH
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Stampfer, S.D, Lou, H, Cohen, G.H, Eisenberg, R.J, Heldwein, E.E.
Deposit date:2010-07-09
Release date:2010-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.75915 Å)
Cite:Structural basis of local, pH-dependent conformational changes in glycoprotein B from herpes simplex virus type 1.
J.Virol., 84, 2010
3NWD
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BU of 3nwd by Molmil
Glycoprotein B from Herpes simplex virus type 1, Y179S mutant, low-pH
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Stampfer, S.D, Lou, H, Cohen, G.H, Eisenberg, R.J, Heldwein, E.E.
Deposit date:2010-07-09
Release date:2010-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8803 Å)
Cite:Structural basis of local, pH-dependent conformational changes in glycoprotein B from herpes simplex virus type 1.
J.Virol., 84, 2010
3OIC
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BU of 3oic by Molmil
Crystal Structure of Enoyl-ACP Reductases III (FabL) from B. subtilis (apo form)
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADPH], SULFATE ION
Authors:Kim, K.-H, Ha, B.H, Kim, S.J, Hong, S.K, Hwang, K.Y, Kim, E.E.
Deposit date:2010-08-19
Release date:2011-01-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of Enoyl-ACP Reductases I (FabI) and III (FabL) from B. subtilis
J.Mol.Biol., 406, 2011
3OJE
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BU of 3oje by Molmil
Crystal Structure of the Bacillus cereus Enoyl-Acyl Carrier Protein Reductase (Apo form)
Descriptor: Enoyl-[acyl-carrier-protein] reductase (FabL) (NADPH)
Authors:Kim, S.J, Ha, B.H, Kim, K.H, Hong, S.K, Suh, S.W, Kim, E.E.
Deposit date:2010-08-22
Release date:2010-09-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Dimeric and tetrameric forms of enoyl-acyl carrier protein reductase from Bacillus cereus
Biochem.Biophys.Res.Commun., 400, 2010
3OZ5
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BU of 3oz5 by Molmil
S-Methyl Carbocyclic LNA
Descriptor: DNA (5'-D(*GP*CP*GP*TP*AP*(UMX)P*AP*CP*GP*C)-3'), SPERMINE
Authors:Seth, P.R, Allerson, C.A, Berdeja, A, Siwkowski, A, Pallan, P.S, Gaus, H, Prakash, T.P, Watt, A.T, Egli, M, Swayze, E.E.
Deposit date:2010-09-24
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:An exocyclic methylene group acts as a bioisostere of the 2'-oxygen atom in LNA.
J.Am.Chem.Soc., 132, 2010
3OQC
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BU of 3oqc by Molmil
Ubiquitin-fold modifier 1 Specific Protease, UfSP2
Descriptor: Ufm1-specific protease 2
Authors:Ha, B.H, Chung, C.H, Kim, E.E.
Deposit date:2010-09-02
Release date:2011-01-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of ubiquitin-fold modifier 1-specific protease UfSP2
J.Biol.Chem., 286, 2011
3OID
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BU of 3oid by Molmil
Crystal Structure of Enoyl-ACP Reductases III (FabL) from B. subtilis (complex with NADP and TCL)
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADPH], NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TRICLOSAN
Authors:Kim, K.-H, Ha, B.H, Kim, S.J, Hong, S.K, Hwang, K.Y, Kim, E.E.
Deposit date:2010-08-19
Release date:2011-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of Enoyl-ACP Reductases I (FabI) and III (FabL) from B. subtilis
J.Mol.Biol., 406, 2011
3OZ3
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BU of 3oz3 by Molmil
Vinyl Carbocyclic LNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*GP*CP*GP*TP*AP*(UVX)P*AP*CP*GP*C)-3')
Authors:Seth, P.R, Allerson, C.A, Berdeja, A, Siwkowski, A, Pallan, P.S, Gaus, H, Prakash, T.P, Watt, A.T, Egli, M, Swayze, E.E.
Deposit date:2010-09-24
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:An exocyclic methylene group acts as a bioisostere of the 2'-oxygen atom in LNA.
J.Am.Chem.Soc., 132, 2010
3OIF
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BU of 3oif by Molmil
Crystal Structure of Enoyl-ACP Reductases I (FabI) from B. subtilis (complex with NAD and TCL)
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TRICLOSAN
Authors:Kim, K.-H, Ha, B.H, Kim, S.J, Hong, S.K, Hwang, K.Y, Kim, E.E.
Deposit date:2010-08-19
Release date:2011-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of Enoyl-ACP Reductases I (FabI) and III (FabL) from B. subtilis
J.Mol.Biol., 406, 2011
7M17
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BU of 7m17 by Molmil
SN-407-LRRC8A in MSP1E3D1 lipid nanodiscs (Pose-1)
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 7-{[(2S)-2-butyl-6,7-dichloro-2-cyclopentyl-1-oxo-2,3-dihydro-1H-inden-5-yl]oxy}heptanoic acid, Volume-regulated anion channel subunit LRRC8A
Authors:Kern, D.M, Gerber, E.E, Brohawn, S.G.
Deposit date:2021-03-12
Release date:2021-03-24
Last modified:2022-02-23
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Small molecule SWELL1 complex induction improves glycemic control and nonalcoholic fatty liver disease in murine Type 2 diabetes.
Nat Commun, 13, 2022
7M19
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BU of 7m19 by Molmil
SN-407-LRRC8A in MSP1E3D1 lipid nanodiscs (Pose-2)
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 7-{[(2S)-2-butyl-6,7-dichloro-2-cyclopentyl-1-oxo-2,3-dihydro-1H-inden-5-yl]oxy}heptanoic acid, Volume-regulated anion channel subunit LRRC8A
Authors:Kern, D.M, Gerber, E.E, Brohawn, S.G.
Deposit date:2021-03-12
Release date:2021-03-24
Last modified:2022-02-23
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:Small molecule SWELL1 complex induction improves glycemic control and nonalcoholic fatty liver disease in murine Type 2 diabetes.
Nat Commun, 13, 2022

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