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PDB: 88 results

2GES
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BU of 2ges by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-I (RT)
Descriptor: Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
Authors:Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
Deposit date:2006-03-20
Release date:2006-06-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GET
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BU of 2get by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-I (LT)
Descriptor: GLYCEROL, Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
Authors:Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
Deposit date:2006-03-20
Release date:2006-06-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GEV
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BU of 2gev by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-II (LT)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Pantothenate kinase, ...
Authors:Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
Deposit date:2006-03-20
Release date:2006-06-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
2GEU
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BU of 2geu by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with a coenzyme A derivative, Form-II (RT)
Descriptor: Pantothenate kinase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-4-{[3-({2-[(2-HYDROXYETHYL)DITHIO]ETHYL}AMINO)-3-OXOPROPYL]AMINO}-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
Authors:Das, S, Kumar, P, Bhor, V, Surolia, A, Vijayan, M.
Deposit date:2006-03-20
Release date:2006-06-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Invariance and variability in bacterial PanK: a study based on the crystal structure of Mycobacterium tuberculosis PanK.
Acta Crystallogr.,Sect.D, 62, 2006
8GMX
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BU of 8gmx by Molmil
Crystal structure of pilin-specific sortase SrtC2 from Lactobacillus rhamnosus GG
Descriptor: Class C sortase
Authors:Das, S, Megta, A.K, Pratap, S, Krishnan, V.
Deposit date:2022-08-22
Release date:2023-08-30
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal structure of pilin-specific sortase SrtC2 from Lactobacillus rhamnosus GG
To Be Published
6U3E
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BU of 6u3e by Molmil
Best fitting antiparallel model for Volume 1 of truncated dimeric Cytohesin-3 (Grp1; amino acids 14-399)
Descriptor: Cytohesin-3, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
Authors:Das, S, Lambright, D.G.
Deposit date:2019-08-21
Release date:2019-09-25
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (53 Å)
Cite:Structural Organization and Dynamics of Homodimeric Cytohesin Family Arf GTPase Exchange Factors in Solution and on Membranes.
Structure, 27, 2019
6U3G
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BU of 6u3g by Molmil
Best fitting antiparallel model for Volume 2 of truncated dimeric Cytohesin-3 (Grp1; amino acids 14-399)
Descriptor: Cytohesin-3, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
Authors:Das, S, Lambright, D.G.
Deposit date:2019-08-21
Release date:2019-09-25
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (53 Å)
Cite:Structural Organization and Dynamics of Homodimeric Cytohesin Family Arf GTPase Exchange Factors in Solution and on Membranes.
Structure, 27, 2019
5GO5
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BU of 5go5 by Molmil
Structure of sortase E from Streptomyces avermitilis
Descriptor: GLYCINE, SULFATE ION, sortase
Authors:Das, S, Pawale, V.S, Dadireddy, V, Roy, R.P, Ramakumar, S.
Deposit date:2016-07-26
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and specificity of a new class of Ca2+-independent housekeeping sortase from Streptomyces avermitilis provide insights into its non-canonical substrate preference.
J. Biol. Chem., 292, 2017
6VSV
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BU of 6vsv by Molmil
Crystal structure of a disease mutant of the Voltage-gated Sodium Channel Beta 4 subunit extracellular domain
Descriptor: Sodium channel subunit beta-4
Authors:Das, S, Van Petegem, F.
Deposit date:2020-02-12
Release date:2020-08-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Biophysical Investigation of Sodium Channel Interaction with beta-Subunit Variants Associated with Arrhythmias.
Bioelectricity, 2, 2020
6VRR
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BU of 6vrr by Molmil
Crystal structure of a disease mutant of the Voltage-gated Sodium Channel Beta 2 subunit extracellular domain
Descriptor: GLYCEROL, Sodium channel subunit beta-2
Authors:Das, S, Van Petegem, F.
Deposit date:2020-02-09
Release date:2020-08-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Biophysical Investigation of Sodium Channel Interaction with beta-Subunit Variants Associated with Arrhythmias.
Bioelectricity, 2, 2020
5GO6
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BU of 5go6 by Molmil
Structure of sortase E T196V mutant from Streptomyces avermitilis
Descriptor: Putative secreted protein, SULFATE ION
Authors:Das, S, Pawale, V.S, Dadireddy, V, Roy, R.P, Ramakumar, S.
Deposit date:2016-07-26
Release date:2017-07-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of sortase E T196V mutant from Streptomyces avermitilis
To Be Published
6U96
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BU of 6u96 by Molmil
Actin phalloidin at BeFx state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Das, S, Ge, P, Durer, Z.A.O, Grintsevich, E.E, Zhou, Z.H, Reisler, E.
Deposit date:2019-09-06
Release date:2020-05-13
Last modified:2020-05-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:D-loop Dynamics and Near-Atomic-Resolution Cryo-EM Structure of Phalloidin-Bound F-Actin.
Structure, 28, 2020
5HGC
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BU of 5hgc by Molmil
A Serpin structure
Descriptor: (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione, 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranose, SULFATE ION, ...
Authors:Das, S, Vashchenko, G.V, Van Petegem, F.
Deposit date:2016-01-08
Release date:2016-04-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:A Serpin structure
J.Biol.Chem., 2016
6BBP
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BU of 6bbp by Molmil
Model for compact volume of truncated monomeric Cytohesin-3 (Grp1; amino acids 63-399) E161A 6GS Arf6 Q67L fusion protein
Descriptor: Cytohesin-3,ADP-ribosylation factor 6, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, ...
Authors:Das, S, Malaby, A.W, Lambright, D.G.
Deposit date:2017-10-19
Release date:2018-01-10
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Structural Dynamics Control Allosteric Activation of Cytohesin Family Arf GTPase Exchange Factors.
Structure, 26, 2018
6BBQ
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BU of 6bbq by Molmil
Model for extended volume of truncated monomeric Cytohesin-3 (Grp1; amino acids 63-399) E161A Arf6 Q67L fusion protein
Descriptor: Cytohesin-3,ADP-ribosylation factor 6, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, ...
Authors:Das, S, Malaby, A.W, Lambright, D.G.
Deposit date:2017-10-19
Release date:2018-01-10
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Structural Dynamics Control Allosteric Activation of Cytohesin Family Arf GTPase Exchange Factors.
Structure, 26, 2018
5FEB
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BU of 5feb by Molmil
Crystal structure of the Voltage-gated Sodium Channel Beta 2 subunit extracellular domain
Descriptor: GLYCEROL, Sodium channel subunit beta-2
Authors:Das, S, Van Petegem, F.
Deposit date:2015-12-16
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Binary architecture of the Nav1.2-beta 2 signaling complex.
Elife, 5, 2016
5FDY
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BU of 5fdy by Molmil
Crystal structure of the Voltage-gated Sodium Channel Beta 2 subunit extracellular domain, C72A/C75A mutant
Descriptor: GLYCEROL, Sodium channel subunit beta-2
Authors:Das, S, Van Petegem, F.
Deposit date:2015-12-16
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Binary architecture of the Nav1.2-beta 2 signaling complex.
Elife, 5, 2016
4I2N
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BU of 4i2n by Molmil
Crystal structure of 31kD Heat Shock Protein, VcHsp31 from Vibrio cholerae
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Intracellular protease/amidase
Authors:Das, S, Sen, U.
Deposit date:2012-11-22
Release date:2013-11-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Temperature dependent structural flexibility and functional activation of 31kD Heat Shock Protein, VcHsp31 from Vibrio cholerae
To be Published
4MZ3
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BU of 4mz3 by Molmil
Crystal structure of the voltage-gated sodium channel beta 4 subunit extracellular domain, C131W mutant
Descriptor: Sodium channel subunit beta-4
Authors:Das, S, Van Petegem, F.
Deposit date:2013-09-28
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.741 Å)
Cite:Crystallographic insights into sodium-channel modulation by the beta 4 subunit.
Proc.Natl.Acad.Sci.USA, 110, 2013
4MZ2
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BU of 4mz2 by Molmil
Crystal structure of the voltage-gated sodium channel beta 4 subunit extracellular domain
Descriptor: Sodium channel subunit beta-4
Authors:Das, S, Van Petegem, F.
Deposit date:2013-09-28
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.722 Å)
Cite:Crystallographic insights into sodium-channel modulation by the beta 4 subunit.
Proc.Natl.Acad.Sci.USA, 110, 2013
1JQW
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BU of 1jqw by Molmil
THE 2.3 ANGSTROM RESOLUTION STRUCTURE OF BACILLUS SUBTILIS LUXS/HOMOCYSTEINE COMPLEX
Descriptor: 2-AMINO-4-MERCAPTO-BUTYRIC ACID, Autoinducer-2 production protein luxS, ZINC ION
Authors:Ruzheinikov, S.N, Das, S.K, Sedelnikova, S.E, Hartley, A, Foster, S.J, Horsburgh, M.J, Cox, A.G, McCleod, C.W, Mekhalfia, A, Blackburn, G.M, Rice, D.W, Baker, P.J.
Deposit date:2001-08-09
Release date:2001-10-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The 1.2 A structure of a novel quorum-sensing protein, Bacillus subtilis LuxS
J.Mol.Biol., 313, 2001
1JVI
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BU of 1jvi by Molmil
THE 2.2 ANGSTROM RESOLUTION STRUCTURE OF BACILLUS SUBTILIS LUXS/RIBOSILHOMOCYSTEINE COMPLEX
Descriptor: (2S)-2-amino-4-[[(2S,3S,4R,5R)-3,4,5-trihydroxyoxolan-2-yl]methylsulfanyl]butanoic acid, 2-AMINO-4-MERCAPTO-BUTYRIC ACID, Autoinducer-2 production protein luxS, ...
Authors:Ruzheinikov, S.N, Das, S.K, Sedelnikova, S.E, Hartley, A, Foster, S.J, Horsburgh, M.J, Cox, A.G, McCleod, C.W, Mekhalfia, A, Blackburn, G.M, Rice, D.W, Baker, P.J.
Deposit date:2001-08-30
Release date:2001-10-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The 1.2 A structure of a novel quorum-sensing protein, Bacillus subtilis LuxS
J.Mol.Biol., 313, 2001
1J98
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BU of 1j98 by Molmil
The 1.2 Angstrom Structure of Bacillus subtilis LuxS
Descriptor: AUTOINDUCER-2 PRODUCTION PROTEIN LUXS, ZINC ION
Authors:Ruzheinikov, S.N, Das, S.K, Sedelnikova, S.E, Hartley, A, Foster, S.J, Horsburgh, M.J, Cox, A.G, McCleod, C.W, Mekhalfia, A, Blackburn, G.M, Rice, D.W, Baker, P.J.
Deposit date:2001-05-24
Release date:2001-06-06
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The 1.2 A Structure of a Novel Quorum-Sensing Protein, Bacillus subtilis LuxS
J.Mol.Biol., 313, 2001
1SVI
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BU of 1svi by Molmil
Crystal Structure of the GTP-binding protein YsxC complexed with GDP
Descriptor: GTP-binding protein YSXC, GUANOSINE-5'-DIPHOSPHATE
Authors:Ruzheinikov, S.N, Das, S.K, Sedelnikova, S.E, Baker, P.J, Artymiuk, P.J, Garcia-Lara, J, Foster, S.J, Rice, D.W.
Deposit date:2004-03-29
Release date:2004-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Analysis of the Open and Closed Conformations of the GTP-binding Protein YsxC from Bacillus subtilis.
J.Mol.Biol., 339, 2004
1SVW
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BU of 1svw by Molmil
Crystal Structure of YsxC complexed with GMPPNP
Descriptor: GTP-binding protein YsxC, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Ruzheinikov, S.N, Das, S.K, Sedelnikova, S.E, Baker, P.J, Artymiuk, P.J, Garcia-Lara, J, Foster, S.J, Rice, D.W.
Deposit date:2004-03-30
Release date:2004-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analysis of the Open and Closed Conformations of the GTP-binding Protein YsxC from Bacillus subtilis.
J.Mol.Biol., 339, 2004

 

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