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PDB: 10 results

7MOO
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BU of 7moo by Molmil
L-type DNA containing 2'-fluoro-2'-deoxycytidine
Descriptor: DNA (5'-D(*(0DG)P*(OFC)P*(0DG)P*(0DT)P*(0DA)P*(0DC)P*(0DG)P*(0DC))-3')
Authors:Dantsu, Y, Zhang, Y, Zhang, W.
Deposit date:2021-05-03
Release date:2022-03-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Synthesis of 2'-Deoxy-2'-fluoro-L-cytidine and Fluorinated L-Nucleic Acids for Structural Studies
Chemistryselect, 6, 2021
8F24
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BU of 8f24 by Molmil
Mirror-image RNA octamer containing 2'-OMe-L-uridine
Descriptor: Mirror-image RNA 0G-XEC-0G-0U-0A-0C-0A-0C, SULFATE ION
Authors:Dantsu, Y, Zhang, W.
Deposit date:2022-11-07
Release date:2023-04-12
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Derivatization of Mirror-Image l-Nucleic Acids with 2'-OMe Modification for Thermal and Structural Stabilization.
Chembiochem, 24, 2023
8F5C
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BU of 8f5c by Molmil
Mirror-image DNA containing 2'-OMe-L-dC modification
Descriptor: DNA (5'-D(*(0DG))-R(P*(XE6))-D(P*(0DG)P*(0DT)P*(0DA)P*(0DC)P*(0DG)P*(0DC))-3'), MAGNESIUM ION
Authors:Zhang, W, Dantsu, Y.
Deposit date:2022-11-13
Release date:2023-09-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Synthesis and Structural Characterization of 2'-Deoxy-2'-Methoxy-L-Cytidine Nucleic Acids
Chemistryselect, 2023
8F27
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BU of 8f27 by Molmil
Mirror-image DNA containing 2'-OMe-L-uridine residue
Descriptor: Mirror-image DNA (5'-D(*(0DG)P*(0MU)P*(0DG)P*(0DT)P*(0DA)P*(0DC)P*(0DA)P*(0DC))-3'), SULFATE ION
Authors:Zhang, W, Dantsu, Y.
Deposit date:2022-11-07
Release date:2023-04-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Derivatization of Mirror-Image l-Nucleic Acids with 2'-OMe Modification for Thermal and Structural Stabilization.
Chembiochem, 24, 2023
8SX6
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BU of 8sx6 by Molmil
RNA duplex bound with GMP and AMP monomers
Descriptor: ADENOSINE MONOPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Zhang, W, Dantsu, Y.
Deposit date:2023-05-19
Release date:2023-05-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand.
Rsc Chem Biol, 4, 2023
8SX5
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GpppA dinucleotide binding to RNA CU template
Descriptor: GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GA3))-3')
Authors:Zhang, W, Dantsu, Y.
Deposit date:2023-05-19
Release date:2023-05-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand.
Rsc Chem Biol, 4, 2023
8SXL
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BU of 8sxl by Molmil
RNA UU template binding to AMP monomer
Descriptor: ADENOSINE MONOPHOSPHATE, RNA (5'-R(*(TLN)P*(TLN)P*(LCA)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*U)-3')
Authors:Zhang, W, Dantsu, Y.
Deposit date:2023-05-22
Release date:2023-05-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand.
Rsc Chem Biol, 4, 2023
8SWG
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BU of 8swg by Molmil
RNA duplex bound with GpppA dinucleotide ligand
Descriptor: GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GA3))-3')
Authors:Zhang, W, Dantsu, Y.
Deposit date:2023-05-18
Release date:2023-05-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand.
Rsc Chem Biol, 4, 2023
8SWO
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BU of 8swo by Molmil
GpppA dinucleotide ligand binding to RNA UC template
Descriptor: GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GA3))-3')
Authors:Zhang, W, Dantsu, Y.
Deposit date:2023-05-19
Release date:2023-05-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand.
Rsc Chem Biol, 4, 2023
8SY1
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BU of 8sy1 by Molmil
RNA duplex bound with imidazolium bridged GA dinucleotide
Descriptor: RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GMA))-3'), [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-[2-azanyl-3-[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]imidazol-1-yl]phosphinic acid
Authors:Zhang, W, Dantsu, Y.
Deposit date:2023-05-24
Release date:2023-05-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand.
Rsc Chem Biol, 4, 2023

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PDB entries from 2024-06-05

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