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PDB: 49 results

1QZM
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alpha-domain of ATPase
Descriptor: ATP-dependent protease La
Authors:Botos, I, Melnikov, E.E, Cherry, S, Khalatova, A.G, Rasulova, F.S, Tropea, J.E, Maurizi, M.R, Rotanova, T.V, Gustchina, A, Wlodawer, A.
Deposit date:2003-09-17
Release date:2004-05-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the AAA+ alpha domain of E. coli Lon protease at 1.9A resolution.
J.Struct.Biol., 146
5IXM
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The LPS Transporter LptDE from Yersinia pestis, core complex
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, LPS-assembly lipoprotein LptE, LPS-assembly protein LptD
Authors:Botos, I, Mayclin, S.J, McCarthy, J.G, Buchanan, S.K.
Deposit date:2016-03-23
Release date:2016-05-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.746 Å)
Cite:Structural and Functional Characterization of the LPS Transporter LptDE from Gram-Negative Pathogens.
Structure, 24, 2016
7UID
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BU of 7uid by Molmil
Thyclotides peptide nucleic acid in complex with DNA
Descriptor: CHLORIDE ION, DNA (5'-D(*GP*AP*TP*GP*TP*GP*AP*TP*A)-3'), Thyclotide, ...
Authors:Botos, I, Appella, D.H.
Deposit date:2022-03-29
Release date:2023-04-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Variation of Tetrahydrofurans in Thyclotides Enhances Oligonucleotide Binding and Cellular Uptake of Peptide Nucleic Acids.
Jacs Au, 3, 2023
7KZL
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Cyclopentane peptide nucleic acid in complex with DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*TP*AP*TP*CP*AP*CP*AP*TP*C)-3'), IODIDE ION, ...
Authors:Botos, I, Appella, D.H.
Deposit date:2020-12-10
Release date:2020-12-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Conformational constraints of cyclopentane peptide nucleic acids facilitate tunable binding to DNA.
Nucleic Acids Res., 49, 2021
6N2I
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BU of 6n2i by Molmil
Lon protease AAA+ domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA-binding ATP-dependent protease La
Authors:Botos, I, Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2018-11-13
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:New insights into structural and functional relationships between LonA proteases and ClpB chaperones.
Febs Open Bio, 9, 2019
5IV8
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The LPS Transporter LptDE from Klebsiella pneumoniae, core complex
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, LPS biosynthesis protein, LPS-assembly lipoprotein LptE
Authors:Botos, I, McCarthy, J.G, Buchanan, S.K.
Deposit date:2016-03-20
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.938 Å)
Cite:Structural and Functional Characterization of the LPS Transporter LptDE from Gram-Negative Pathogens.
Structure, 24, 2016
5IVA
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The LPS Transporter LptDE from Pseudomonas aeruginosa, core complex
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, LPS-assembly lipoprotein LptE, LPS-assembly protein LptD
Authors:Botos, I, Buchanan, S.K.
Deposit date:2016-03-20
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.988 Å)
Cite:Structural and Functional Characterization of the LPS Transporter LptDE from Gram-Negative Pathogens.
Structure, 24, 2016
5IV9
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The LPS Transporter LptDE from Klebsiella pneumoniae, full-length
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, LPS-assembly lipoprotein LptE, LPS-assembly protein LptD
Authors:Botos, I, McCarthy, J.G, Buchanan, S.K.
Deposit date:2016-03-20
Release date:2016-05-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (4.369 Å)
Cite:Structural and Functional Characterization of the LPS Transporter LptDE from Gram-Negative Pathogens.
Structure, 24, 2016
1DTH
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METALLOPROTEASE
Descriptor: 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE, ATROLYSIN C, CALCIUM ION, ...
Authors:Botos, I, Scapozza, L, Zhang, D, Liotta, L.A, Meyer, E.F.
Deposit date:1996-02-12
Release date:1997-02-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Batimastat, a potent matrix mealloproteinase inhibitor, exhibits an unexpected mode of binding.
Proc.Natl.Acad.Sci.USA, 93, 1996
1CXV
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STRUCTURE OF RECOMBINANT MOUSE COLLAGENASE-3 (MMP-13)
Descriptor: 2-{4-[4-(4-CHLORO-PHENOXY)-BENZENESULFONYL]-TETRAHYDRO-PYRAN-4-YL}-N-HYDROXY-ACETAMIDE, CALCIUM ION, PROTEIN (COLLAGENASE-3), ...
Authors:Botos, I, Meyer, E, Swanson, S.M, Lemaitre, V, Eeckhout, Y, Meyer, E.F.
Deposit date:1999-08-30
Release date:2000-08-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of recombinant mouse collagenase-3 (MMP-13).
J.Mol.Biol., 292, 1999
1RRE
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Crystal structure of E.coli Lon proteolytic domain
Descriptor: ATP-dependent protease La, SULFATE ION
Authors:Botos, I, Melnikov, E.E, Cherry, S, Tropea, J.E, Khalatova, A.G, Rasulova, F, Dauter, Z, Maurizi, M.R, Rotanova, T.V, Wlodawer, A, Gustchina, A.
Deposit date:2003-12-08
Release date:2004-02-03
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The catalytic domain of Escherichia coli Lon protease has a unique fold and a Ser-Lys dyad in the active site
J.Biol.Chem., 279, 2004
1RR9
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Catalytic domain of E.coli Lon protease
Descriptor: ATP-dependent protease La, SULFATE ION
Authors:Botos, I, Melnikov, E.E, Cherry, S, Tropea, J.E, Khalatova, A.G, Dauter, Z, Maurizi, M.R, Rotanova, T.V, Wlodawer, A, Gustchina, A.
Deposit date:2003-12-08
Release date:2003-12-23
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The catalytic domain of Escherichia coli Lon protease has a unique fold and a Ser-Lys dyad in the active site
J.Biol.Chem., 279, 2004
3GXY
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BU of 3gxy by Molmil
Crystal structure of cyanovirin-n complexed to a synthetic hexamannoside
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Cyanovirin-N, MAGNESIUM ION, ...
Authors:Botos, I, O'Keefe, B.R, Shenoy, S.R, Seeberger, P.H, Boyd, M.R, Wlodawer, A.
Deposit date:2009-04-03
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of the complexes of a potent anti-HIV protein cyanovirin-n and high mannose oligosaccharides
J.Biol.Chem., 277, 2002
3GXZ
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Crystal structure of cyanovirin-n complexed to oligomannose-9 (man-9)
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Cyanovirin-N, MAGNESIUM ION, ...
Authors:Botos, I, O'Keefe, B.R, Shenoy, S.R, Seeberger, P.H, Boyd, M.R, Wlodawer, A.
Deposit date:2009-04-03
Release date:2009-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of the complexes of a potent anti-HIV protein cyanovirin-N and high mannose oligosaccharides
J.Biol.Chem., 277, 2002
1EQ9
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CRYSTAL STRUCTURE OF FIRE ANT CHYMOTRYPSIN COMPLEXED TO PMSF
Descriptor: CHYMOTRYPSIN, phenylmethanesulfonic acid
Authors:Botos, I, Meyer, E, Nguyen, M.H, Swanson, S.M, Meyer, E.F.
Deposit date:2000-04-03
Release date:2000-10-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structure of an insect chymotrypsin.
J.Mol.Biol., 298, 2000
1Z0E
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BU of 1z0e by Molmil
Crystal Structure of A. fulgidus Lon proteolytic domain
Descriptor: Putative protease La homolog type
Authors:Botos, I, Melnikov, E.E, Cherry, S, Kozlov, S, Makhovskaya, O.V, Tropea, J.E, Gustchina, A, Rotanova, T.V, Wlodawer, A.
Deposit date:2005-03-01
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Atomic-resolution Crystal Structure of the Proteolytic Domain of Archaeoglobus fulgidus Lon Reveals the Conformational Variability in the Active Sites of Lon Proteases
J.Mol.Biol., 351, 2005
1Z0G
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Crystal Structure of A. fulgidus Lon proteolytic domain
Descriptor: Putative protease La homolog type
Authors:Botos, I, Melnikov, E.E, Cherry, S, Kozlov, S, Makhovskaya, O.V, Tropea, J.E, Gustchina, A, Rotanova, T.V, Wlodawer, A.
Deposit date:2005-03-01
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Atomic-resolution Crystal Structure of the Proteolytic Domain of Archaeoglobus fulgidus Lon Reveals the Conformational Variability in the Active Sites of Lon Proteases
J.Mol.Biol., 351, 2005
1Z0W
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BU of 1z0w by Molmil
Crystal Structure of A. fulgidus Lon proteolytic domain at 1.2A resolution
Descriptor: CALCIUM ION, Putative protease La homolog type
Authors:Botos, I, Melnikov, E.E, Cherry, S, Kozlov, S, Makhovskaya, O.V, Tropea, J.E, Gustchina, A, Rotanova, T.V, Wlodawer, A.
Deposit date:2005-03-02
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Atomic-resolution Crystal Structure of the Proteolytic Domain of Archaeoglobus fulgidus Lon Reveals the Conformational Variability in the Active Sites of Lon Proteases
J.Mol.Biol., 351, 2005
1Z0B
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BU of 1z0b by Molmil
Crystal Structure of A. fulgidus Lon proteolytic domain E506A mutant
Descriptor: CALCIUM ION, Putative protease La homolog type
Authors:Botos, I, Melnikov, E.E, Cherry, S, Kozlov, S, Makhovskaya, O.V, Tropea, J.E, Gustchina, A, Rotanova, T.V, Wlodawer, A.
Deposit date:2005-03-01
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Atomic-resolution Crystal Structure of the Proteolytic Domain of Archaeoglobus fulgidus Lon Reveals the Conformational Variability in the Active Sites of Lon Proteases
J.Mol.Biol., 351, 2005
1Z0C
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Crystal Structure of A. fulgidus Lon proteolytic domain D508A mutant
Descriptor: Putative protease La homolog type
Authors:Botos, I, Melnikov, E.E, Cherry, S, Kozlov, S, Makhovskaya, O.V, Tropea, J.E, Gustchina, A, Rotanova, T.V, Wlodawer, A.
Deposit date:2005-03-01
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Atomic-resolution Crystal Structure of the Proteolytic Domain of Archaeoglobus fulgidus Lon Reveals the Conformational Variability in the Active Sites of Lon Proteases
J.Mol.Biol., 351, 2005
6U5Z
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Cryo-EM structure of E. coli LonA S679A
Descriptor: Lon protease
Authors:Botos, I, Lountos, G.T, Weimin, W, Wlodawer, A.
Deposit date:2019-08-28
Release date:2020-02-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of substrate-free E. coli Lon protease provides insights into the dynamics of Lon machinery
Curr Res Struct Biol, 1, 2020
1K6U
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Crystal Structure of Cyclic Bovine Pancreatic Trypsin Inhibitor
Descriptor: 1,2-ETHANEDIOL, PANCREATIC TRYPSIN INHIBITOR, SULFATE ION
Authors:Botos, I, Wu, Z, Lu, W, Wlodawer, A.
Deposit date:2001-10-17
Release date:2001-12-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1 Å)
Cite:Crystal structure of a cyclic form of bovine pancreatic trypsin inhibitor.
FEBS Lett., 509, 2001
1LOM
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CYANOVIRIN-N DOUBLE MUTANT P51S S52P
Descriptor: CALCIUM ION, Cyanovirin-N, SULFATE ION
Authors:Botos, I, Mori, T, Cartner, L.K, Boyd, M.R, Wlodawer, A.
Deposit date:2002-05-06
Release date:2002-06-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Domain-swapped structure of a mutant of cyanovirin-N.
Biochem.Biophys.Res.Commun., 294, 2002
2A0Z
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BU of 2a0z by Molmil
The molecular structure of toll-like receptor 3 ligand binding domain
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bell, J.K, Botos, I, Hall, P.R, Askins, J, Shiloach, J, Segal, D.M, Davies, D.R.
Deposit date:2005-06-17
Release date:2005-08-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The molecular structure of the Toll-like receptor 3 ligand-binding domain
Proc.Natl.Acad.Sci.USA, 102, 2005
6TYI
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ExbB-ExbD complex in MSP1E3D1 nanodisc
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, Biopolymer transport protein ExbB, ...
Authors:Celia, H, Botos, I, Jiang, J, Buchanan, S.K.
Deposit date:2019-08-09
Release date:2019-10-16
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of the bacterial Ton motor subcomplex ExbB-ExbD provides information on structure and stoichiometry.
Commun Biol, 2, 2019

 

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