Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 109 results

4N82
DownloadVisualize
BU of 4n82 by Molmil
X-ray crystal structure of Streptococcus sanguinis NrdIox
Descriptor: FLAVIN MONONUCLEOTIDE, Ribonucleotide reductase, SULFATE ION
Authors:Boal, A.K, Rosenzweig, A.C.
Deposit date:2013-10-16
Release date:2014-01-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Streptococcus sanguinis Class Ib Ribonucleotide Reductase: HIGH ACTIVITY WITH BOTH IRON AND MANGANESE COFACTORS AND STRUCTURAL INSIGHTS.
J.Biol.Chem., 289, 2014
4N83
DownloadVisualize
BU of 4n83 by Molmil
X-ray crystal structure of Streptococcus sanguinis dimanganese(II)-NrdF
Descriptor: MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta
Authors:Boal, A.K, Rosenzweig, A.C.
Deposit date:2013-10-16
Release date:2014-01-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Streptococcus sanguinis Class Ib Ribonucleotide Reductase: HIGH ACTIVITY WITH BOTH IRON AND MANGANESE COFACTORS AND STRUCTURAL INSIGHTS.
J.Biol.Chem., 289, 2014
3IWX
DownloadVisualize
BU of 3iwx by Molmil
Crystal structure of cisplatin bound to a human copper chaperone (dimer)
Descriptor: Cisplatin, Copper transport protein ATOX1, SULFATE ION
Authors:Boal, A.K, Rosenzweig, A.C.
Deposit date:2009-09-03
Release date:2009-09-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystal structures of cisplatin bound to a human copper chaperone.
J.Am.Chem.Soc., 131, 2009
3IWL
DownloadVisualize
BU of 3iwl by Molmil
Crystal structure of cisplatin bound to a human copper chaperone (monomer)
Descriptor: 3,3',3''-phosphanetriyltripropanoic acid, Copper transport protein ATOX1, PLATINUM (II) ION, ...
Authors:Boal, A.K, Rosenzweig, A.C.
Deposit date:2009-09-02
Release date:2009-09-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of cisplatin bound to a human copper chaperone.
J.Am.Chem.Soc., 131, 2009
3RF9
DownloadVisualize
BU of 3rf9 by Molmil
X-ray structure of RlmN from Escherichia coli
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, IRON/SULFUR CLUSTER, Ribosomal RNA large subunit methyltransferase N
Authors:Boal, A.K, Grove, T.L, McLaughlin, M.I, Yennawar, N, Booker, S.J, Rosenzweig, A.C.
Deposit date:2011-04-05
Release date:2011-05-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for methyl transfer by a radical SAM enzyme.
Science, 332, 2011
3RFA
DownloadVisualize
BU of 3rfa by Molmil
X-ray structure of RlmN from Escherichia coli in complex with S-adenosylmethionine
Descriptor: IRON/SULFUR CLUSTER, Ribosomal RNA large subunit methyltransferase N, S-ADENOSYLMETHIONINE
Authors:Boal, A.K, Grove, T.L, McLaughlin, M.I, Yennawar, N, Booker, S.J, Rosenzweig, A.C.
Deposit date:2011-04-05
Release date:2011-05-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for methyl transfer by a radical SAM enzyme.
Science, 332, 2011
4M1I
DownloadVisualize
BU of 4m1i by Molmil
X-ray crystal structure of Chlamydia trachomatis Mn(II)Fe(II)-NrdB
Descriptor: ACETIC ACID, FE (III) ION, HEXAETHYLENE GLYCOL, ...
Authors:Boal, A.K, Rosenzweig, A.C.
Deposit date:2013-08-02
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Assembly of the Mn(IV)/Fe(III) Cofactor in the Class Ic Ribonucleotide Reductase from Chlamydia trachomatis.
Biochemistry, 52, 2013
4M1H
DownloadVisualize
BU of 4m1h by Molmil
X-ray crystal structure of Chlamydia trachomatis apo NrdB
Descriptor: Ribonucleoside-diphosphate reductase subunit beta
Authors:Boal, A.K, Rosenzweig, A.C.
Deposit date:2013-08-02
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Structural Basis for Assembly of the Mn(IV)/Fe(III) Cofactor in the Class Ic Ribonucleotide Reductase from Chlamydia trachomatis.
Biochemistry, 52, 2013
4M1F
DownloadVisualize
BU of 4m1f by Molmil
X-ray crystal structure of E. coli apo NrdF
Descriptor: Ribonucleoside-diphosphate reductase 2 subunit beta
Authors:Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C.
Deposit date:2013-08-02
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystal structure of E. coli apo NrdF
To be Published
4DR0
DownloadVisualize
BU of 4dr0 by Molmil
Crystal structure of Bacillus subtilis dimanganese(II) NrdF
Descriptor: MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION
Authors:Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C.
Deposit date:2012-02-16
Release date:2012-04-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Dimanganese(II) Site of Bacillus subtilis Class Ib Ribonucleotide Reductase.
Biochemistry, 51, 2012
4OJ8
DownloadVisualize
BU of 4oj8 by Molmil
Crystal structure of carbapenem synthase in complex with (3S,5S)-carbapenam
Descriptor: (2S,5S)-7-oxo-1-azabicyclo[3.2.0]heptane-2-carboxylic acid, (5R)-carbapenem-3-carboxylate synthase, 2-OXOGLUTARIC ACID, ...
Authors:Boal, A.K, Rosenzweig, A.C.
Deposit date:2014-01-20
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of the C5 stereoinversion reaction in the biosynthesis of carbapenem antibiotics.
Science, 343, 2014
4PL2
DownloadVisualize
BU of 4pl2 by Molmil
X-ray crystal structure of C118A RlmN from Escherichia coli
Descriptor: Dual-specificity RNA methyltransferase RlmN, IRON/SULFUR CLUSTER
Authors:Boal, A.K, Rosenzweig, A.C.
Deposit date:2014-05-15
Release date:2014-05-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Characterization of a cross-linked protein-nucleic acid substrate radical in the reaction catalyzed by RlmN.
J.Am.Chem.Soc., 136, 2014
4PL1
DownloadVisualize
BU of 4pl1 by Molmil
X-ray crystal structure of C118A RlmN from Escherichia coli with S-adenosylmethionine
Descriptor: Dual-specificity RNA methyltransferase RlmN, IRON/SULFUR CLUSTER, S-ADENOSYLMETHIONINE
Authors:Boal, A.K, Rosenzweig, A.C.
Deposit date:2014-05-15
Release date:2014-05-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Characterization of a cross-linked protein-nucleic acid substrate radical in the reaction catalyzed by RlmN.
J.Am.Chem.Soc., 136, 2014
3N3A
DownloadVisualize
BU of 3n3a by Molmil
Ribonucleotide Reductase Dimanganese(II)-NrdF from Escherichia coli in Complex with Reduced NrdI
Descriptor: FLAVIN MONONUCLEOTIDE, MANGANESE (II) ION, Protein nrdI, ...
Authors:Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C.
Deposit date:2010-05-19
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural basis for activation of class Ib ribonucleotide reductase.
Science, 329, 2010
3N39
DownloadVisualize
BU of 3n39 by Molmil
Ribonucleotide Reductase Dimanganese(II)-NrdF from Escherichia coli in Complex with NrdI
Descriptor: FLAVIN MONONUCLEOTIDE, MANGANESE (II) ION, Protein nrdI, ...
Authors:Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C.
Deposit date:2010-05-19
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for activation of class Ib ribonucleotide reductase.
Science, 329, 2010
3N37
DownloadVisualize
BU of 3n37 by Molmil
Ribonucleotide Reductase Dimanganese(II)-NrdF from Escherichia coli
Descriptor: GLYCEROL, MANGANESE (II) ION, Ribonucleoside-diphosphate reductase 2 subunit beta
Authors:Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C.
Deposit date:2010-05-19
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis for activation of class Ib ribonucleotide reductase.
Science, 329, 2010
3N38
DownloadVisualize
BU of 3n38 by Molmil
Ribonucleotide Reductase NrdF from Escherichia coli Soaked with Ferrous Ions
Descriptor: FE (II) ION, Ribonucleoside-diphosphate reductase 2 subunit beta
Authors:Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C.
Deposit date:2010-05-19
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for activation of class Ib ribonucleotide reductase.
Science, 329, 2010
3N3B
DownloadVisualize
BU of 3n3b by Molmil
Ribonucleotide Reductase Dimanganese(II)-NrdF from Escherichia coli in Complex with Reduced NrdI with a Trapped Peroxide
Descriptor: FLAVIN MONONUCLEOTIDE, HYDROGEN PEROXIDE, MANGANESE (II) ION, ...
Authors:Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C.
Deposit date:2010-05-19
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural basis for activation of class Ib ribonucleotide reductase.
Science, 329, 2010
6VWR
DownloadVisualize
BU of 6vwr by Molmil
X-ray structure of clavaminate synthase with vanadyl, succinate, and deoxyguanidinoproclavaminic acid
Descriptor: Clavaminate synthase 3, DEOXYGUANIDINOPROCLAVAMINIC ACID, SUCCINIC ACID, ...
Authors:Boal, A.K, Vavra, J.
Deposit date:2020-02-20
Release date:2021-02-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:X-ray structure of clavaminate synthase with vanadyl, succinate, and deoxyguanidinoproclavaminic acid
To Be Published
6VWQ
DownloadVisualize
BU of 6vwq by Molmil
X-ray crystal structure of clavaminate synthase with vanadyl, succinate, and deoxyproclavaminic acid
Descriptor: Clavaminate synthase 3, SUCCINIC ACID, deoxyproclavaminic acid, ...
Authors:Boal, A.K, Vavra, J.
Deposit date:2020-02-20
Release date:2021-02-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:X-ray crystal structure of clavaminate synthase with vanadyl, succinate, and deoxyproclavaminic acid
To Be Published
6M9S
DownloadVisualize
BU of 6m9s by Molmil
Crystal structure of SeMet SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697
Descriptor: FE (III) ION, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Rohac, R, Mitchell, A.J, Boal, A.K.
Deposit date:2018-08-24
Release date:2019-02-06
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:An N-nitrosating metalloenzyme constructs the pharmacophore of streptozotocin.
Nature, 566, 2019
6DAX
DownloadVisualize
BU of 6dax by Molmil
X-ray crystal structure of VioC bound to Fe(II), L-homoarginine, and 2-oxoglutarate
Descriptor: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent L-arginine hydroxylase, FE (II) ION, ...
Authors:Dunham, N.P, Mitchell, A.J, Boal, A.K.
Deposit date:2018-05-02
Release date:2018-05-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Two Distinct Mechanisms for C-C Desaturation by Iron(II)- and 2-(Oxo)glutarate-Dependent Oxygenases: Importance of alpha-Heteroatom Assistance.
J. Am. Chem. Soc., 140, 2018
6XCV
DownloadVisualize
BU of 6xcv by Molmil
Crystal structure of apo SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697
Descriptor: Cupin domain-containing diiron protein
Authors:McBride, M.J, Boal, A.K.
Deposit date:2020-06-09
Release date:2021-01-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structure and assembly of the diiron cofactor in the heme-oxygenase-like domain of the N -nitrosourea-producing enzyme SznF.
Proc.Natl.Acad.Sci.USA, 118, 2021
4N6W
DownloadVisualize
BU of 4n6w by Molmil
X-Ray Crystal Structure of Citrate-bound PhnZ
Descriptor: CITRATE ANION, FE (III) ION, Predicted HD phosphohydrolase PhnZ
Authors:Worsdorfer, B, Lingaraju, M, Yennawar, N.H, Boal, A.K, Krebs, C, Bollinger Jr, J.M, Pandelia, M.E.
Deposit date:2013-10-14
Release date:2013-11-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Organophosphonate-degrading PhnZ reveals an emerging family of HD domain mixed-valent diiron oxygenases.
Proc.Natl.Acad.Sci.USA, 110, 2013
4N71
DownloadVisualize
BU of 4n71 by Molmil
X-Ray Crystal Structure of 2-amino-1-hydroxyethylphosphonate-bound PhnZ
Descriptor: FE (III) ION, Predicted HD phosphohydrolase PhnZ, [(1R)-2-amino-1-hydroxyethyl]phosphonic acid
Authors:Woersdoerfer, B, Lingaraju, M, Yennawar, N, Boal, A.K, Krebs, C, Bollinger Jr, J.M, Pandelia, M.-E.
Deposit date:2013-10-14
Release date:2013-11-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.984 Å)
Cite:Organophosphonate-degrading PhnZ reveals an emerging family of HD domain mixed-valent diiron oxygenases.
Proc.Natl.Acad.Sci.USA, 110, 2013

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon