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PDB: 102 results

2JRL
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Solution structure of the beryllofluoride-activated NtrC4 receiver domain dimer
Descriptor: Transcriptional regulator (NtrC family)
Authors:Lee, C, Hong, E, Doucleff, M, Pelton, J.G, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC)
Deposit date:2007-06-27
Release date:2008-07-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of the Beryllofluoride-Activated NtrC4 Receiver Domain Dimer.
To be Published
1TD9
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Crystal Structure of a Phosphotransacetylase from Bacillus subtilis
Descriptor: Phosphate acetyltransferase, SULFATE ION
Authors:Xu, Q.S, Jancarik, J, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-05-21
Release date:2004-12-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structures of a phosphotransacetylase from Bacillus subtilis and its complex with acetyl phosphate
J.STRUCT.FUNCT.GENOM., 6, 2005
1ZXJ
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Crystal structure of the hypthetical Mycoplasma protein, MPN555
Descriptor: Hypothetical protein MG377 homolog
Authors:Schulze-Gahmen, U, Aono, S, Shengfeng, C, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-06-08
Release date:2005-07-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the hypothetical Mycoplasma protein MPN555 suggests a chaperone function.
Acta Crystallogr.,Sect.D, 61, 2005
1S3M
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Structural and Functional Characterization of a Novel Archaeal Phosphodiesterase
Descriptor: Hypothetical protein MJ0936, NICKEL (II) ION
Authors:Chen, S, Busso, D, Yakunin, A.F, Kuznetsova, E, Proudfoot, M, Jancrick, J, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-13
Release date:2004-08-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional characterization of a novel phosphodiesterase from Methanococcus jannaschii
J.Biol.Chem., 279, 2004
1S3N
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Structural and Functional Characterization of a Novel Archaeal Phosphodiesterase
Descriptor: Hypothetical protein MJ0936, MANGANESE (II) ION
Authors:Chen, S, Busso, D, Yakunin, A.F, Kuznetsova, E, Proudfoot, M, Jancrick, J, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-13
Release date:2004-08-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional characterization of a novel phosphodiesterase from Methanococcus jannaschii
J.Biol.Chem., 279, 2004
1S7O
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Crystal structure of putative DNA binding protein SP_1288 from Streptococcus pygenes
Descriptor: Hypothetical UPF0122 protein SPy1201/SpyM3_0842/SPs1042/spyM18_1152
Authors:Oganesyan, V, Pufan, R, DeGiovanni, A, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-29
Release date:2004-06-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structure of the putative DNA-binding protein SP_1288 from Streptococcus pyogenes.
Acta Crystallogr.,Sect.D, 60, 2004
1S3L
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Structural and Functional Characterization of a Novel Archaeal Phosphodiesterase
Descriptor: Hypothetical protein MJ0936, PHOSPHATE ION, UNKNOWN ATOM OR ION
Authors:Chen, S, Busso, D, Yakunin, A.F, Kuznetsova, E, Proudfoot, M, Jancrick, J, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-13
Release date:2004-08-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and functional characterization of a novel phosphodiesterase from Methanococcus jannaschii
J.Biol.Chem., 279, 2004
1YTE
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Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum, phosphoribosylpyrophosphate bound structure
Descriptor: 1-ALPHA-PYROPHOSPHORYL-2-ALPHA,3-ALPHA-DIHYDROXY-4-BETA-CYCLOPENTANE-METHANOL-5-PHOSPHATE, nicotinate phosphoribosyltransferase from Thermoplasma acidophilum
Authors:Shin, D.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-02-10
Release date:2005-03-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum.
J.Biol.Chem., 280, 2005
1YTD
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Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum, Native Structure
Descriptor: nicotinate phosphoribosyltransferase from Thermoplasma acidophilum
Authors:Shin, D.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-02-10
Release date:2005-03-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum.
J.Biol.Chem., 280, 2005
1T70
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Crystal structure of a novel phosphatase from Deinococcus radiodurans
Descriptor: Phosphatase
Authors:Shin, D.H, Wang, W, Kim, R, Yokota, H, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-05-07
Release date:2004-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and enzymatic characterization of DR1281: A calcineurin-like phosphoesterase from Deinococcus radiodurans.
Proteins, 70, 2008
1U3F
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Structural and Functional Characterization of a 5,10-Methenyltetrahydrofolate Synthetase from Mycoplasma pneumoniae (GI: 13508087)
Descriptor: 5,10-Methenyltetrahydrofolate Synthetase, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Chen, S, Yakunin, A.F, Proudfoot, M, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-07-21
Release date:2004-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of methenyltetrahydrofolate synthetase from Mycoplasma pneumoniae (GI: 13508087) at 2.2 A resolution
Proteins, 56, 2004
1U0L
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Crystal structure of YjeQ from Thermotoga maritima
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Probable GTPase engC, ZINC ION
Authors:Shin, D.H, Lou, Y, Jaru, J, Kim, R, Yokota, H, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-07-13
Release date:2004-09-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of YjeQ from Thermotoga maritima contains a circularly permuted GTPase domain
Proc.Natl.Acad.Sci.Usa, 101, 2004
1U3G
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Structural and Functional Characterization of a 5,10-Methenyltetrahydrofolate Synthetase from Mycoplasma pneumoniae (GI: 13508087)
Descriptor: 5,10-Methenyltetrahydrofolate Synthetase, 5-HYDROXYMETHYLENE-6-HYDROFOLIC ACID, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Chen, S, Yakunin, A.F, Proudfoot, M, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-07-21
Release date:2004-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of methenyltetrahydrofolate synthetase from Mycoplasma pneumoniae (GI: 13508087) at 2.2 A resolution
Proteins, 56, 2004
1OZ9
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Crystal structure of AQ_1354, a hypothetical protein from Aquifex aeolicus
Descriptor: Hypothetical protein AQ_1354
Authors:Oganesyan, V, Busso, D, Brandsen, J, Chen, S, Jancarik, J, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2003-04-08
Release date:2003-09-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.894 Å)
Cite:Structure of the hypothetical protein AQ_1354 from Aquifex aeolicus.
Acta Crystallogr.,Sect.D, 59, 2003
1YF2
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Three-dimensional structure of DNA sequence specificity (S) subunit of a type I restriction-modification enzyme and its functional implications
Descriptor: Type I restriction-modification enzyme, S subunit
Authors:Kim, J.S, Degiovanni, A, Jancarik, J, Adams, P.D, Yokota, H.A, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-12-30
Release date:2005-02-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of DNA sequence specificity subunit of a type I restriction-modification enzyme and its functional implications.
Proc.Natl.Acad.Sci.USA, 102, 2005
1S12
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Crystal structure of TM1457
Descriptor: ACETATE ION, hypothetical protein TM1457
Authors:Shin, D.H, Lou, Y, Jancarik, J, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-05
Release date:2004-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of TM1457 from Thermotoga maritima.
J.Struct.Biol., 152, 2005
1YTK
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Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum with nicotinate mononucleotide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, NICOTINATE MONONUCLEOTIDE, nicotinate phosphoribosyltransferase from Thermoplasma acidophilum
Authors:Shin, D.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-02-10
Release date:2005-03-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of a nicotinate phosphoribosyltransferase from Thermoplasma acidophilum.
J.Biol.Chem., 280, 2005
1YYX
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The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) at 2.8M urea
Descriptor: Redesigned apo-cytochrome b562
Authors:Feng, H, Vu, N, Bai, Y, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-02-25
Release date:2005-08-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Detection and structure determination of an equilibrium unfolding intermediates of Rd-apocytochrome b562: native fold with non-native hydrophobic interactions
J.Mol.Biol., 343, 2004
1SU0
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Crystal structure of a hypothetical protein at 2.3 A resolution
Descriptor: NifU like protein IscU, ZINC ION
Authors:Liu, J, Oganesyan, N, Shin, D.-H, Jancarik, J, Pufan, R, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-03-25
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural characterization of an iron-sulfur cluster assembly protein IscU in a zinc-bound form.
Proteins, 59, 2005
1YZA
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The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) with the N-terminal helix unfolded
Descriptor: Redesigned apo-cytochrome b562
Authors:Feng, H, Takei, T, Lipsitz, R, Tjandra, N, Bai, Y, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-02-28
Release date:2005-08-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Specific non-native hydrophobic interactions in a hidden folding intermediate: implication for protein folding
Biochemistry, 42, 2003
1Z0S
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Crystal structure of an NAD kinase from Archaeoglobus fulgidus in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PYROPHOSPHATE 2-, ...
Authors:Liu, J, Lou, Y, Yokota, H, Adams, P.D, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-03-02
Release date:2005-04-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structures of an NAD Kinase from Archaeoglobus fulgidus in Complex with ATP, NAD, or NADP
J.Mol.Biol., 354, 2005
1YYJ
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The NMR solution structure of a redesigned apocytochrome b562:Rd-apocyt b562
Descriptor: redesigned apocytochrome B562
Authors:Feng, H, Takei, J, Lipsitz, R, Tjandra, N, Bai, Y, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-02-25
Release date:2005-08-25
Last modified:2023-09-27
Method:SOLUTION NMR
Cite:Specific non-native hydrophobic interactions in a hidden folding intermediate: implications for protein folding
Biochemistry, 42, 2003
1YZC
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The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) with the N- and a part of the C-terminal helices unfolded
Descriptor: edesigned apo-cytochrome b562
Authors:Feng, H, Zhou, Z, Bai, Y, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-02-28
Release date:2006-03-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:A protein folding pathway with multiple folding intermediates at atomic resolution
Proc.Natl.Acad.Sci.Usa, 102, 2005
1Z0Z
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Crystal structure of a NAD kinase from Archaeoglobus fulgidus in complex with NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Probable inorganic polyphosphate/ATP-NAD kinase
Authors:Liu, J, Lou, Y, Yokota, H, Adams, P.D, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-03-02
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal Structures of an NAD Kinase from Archaeoglobus fulgidus in Complex with ATP, NAD, or NADP
J.Mol.Biol., 354, 2005
1Z0U
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Crystal structure of a NAD kinase from Archaeoglobus fulgidus bound by NADP
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Probable inorganic polyphosphate/ATP-NAD kinase, SULFATE ION
Authors:Liu, J, Lou, Y, Yokota, H, Adams, P.D, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-03-02
Release date:2005-04-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of an NAD Kinase from Archaeoglobus fulgidus in Complex with ATP, NAD, or NADP
J.Mol.Biol., 354, 2005

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