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PDB: 62 results

1CRZ
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CRYSTAL STRUCTURE OF THE E. COLI TOLB PROTEIN
Descriptor: TOLB PROTEIN
Authors:Abergel, C, Bouveret, E, Claverie, J.-M, Brown, K, Rigal, A, Lazdunski, C, Benedetti, H.
Deposit date:1999-08-16
Release date:2000-08-16
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of the Escherichia coli TolB protein determined by MAD methods at 1.95 A resolution.
Structure Fold.Des., 7, 1999
1GPQ
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Structure of ivy complexed with its target, HEWL
Descriptor: INHIBITOR OF VERTEBRATE LYSOZYME, LYSOZYME C
Authors:Abergel, C, Monchois, V, Claverie, J.-M.
Deposit date:2001-11-08
Release date:2003-03-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and Evolution of the Ivy Protein Family, Unexpected Lysozyme Inhibitors in Gram-Negative Bacteria.
Proc.Natl.Acad.Sci.USA, 104, 2007
4BNQ
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BU of 4bnq by Molmil
The structure of the Staphylococcus aureus Ham1 protein
Descriptor: GLYCEROL, NON-CANONICAL PURINE NTP PYROPHOSPHATASE, PHOSPHATE ION
Authors:Abergel, C, Claverie, J.M.
Deposit date:2013-05-16
Release date:2013-05-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.279 Å)
Cite:Molecular Replacement: Tricks and Treats.
Acta Crystallogr.,Sect.D, 69, 2013
1H1O
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BU of 1h1o by Molmil
Acidithiobacillus ferrooxidans cytochrome c4 structure supports a complex-induced tuning of electron transfer
Descriptor: CYTOCHROME C-552, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Abergel, C, Nitschke, W, Malarte, G, Bruschi, M, Claverie, J.-M, Guidici-Orticoni, M.-T.
Deposit date:2002-07-19
Release date:2003-07-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:The Structure of Acidithiobacillus Ferrooxidans C(4)-Cytochrome. A Model for Complex-Induced Electron Transfer Tuning
Structure, 11, 2003
1OKJ
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BU of 1okj by Molmil
crystal structure of the essential E. coli YeaZ protein by MAD method using the gadolinium complex "DOTMA"
Descriptor: GADOLINIUM ION, TRNA THREONYLCARBAMOYLADENOSINE BIOSYNTHESIS PROTEIN TSAB
Authors:Abergel, C, Jeudy, S, Claverie, J.M.
Deposit date:2003-07-26
Release date:2004-09-16
Last modified:2014-07-23
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:A Complement to the Modern Crystallographer'S Toolbox: Caged Gadolinium Complexes with Versatile Binding Modes.
Acta Crystallogr.,Sect.D, 70, 2014
1XS0
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BU of 1xs0 by Molmil
Structure of the E. coli Ivy protein
Descriptor: Inhibitor of vertebrate lysozyme
Authors:Abergel, C, Monchois, V, Byrn, D, Lazzaroni, J.C, Claverie, J.M.
Deposit date:2004-10-18
Release date:2004-11-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structure and evolution of the Ivy protein family, unexpected lysozyme inhibitors in Gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 104, 2007
2J5B
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BU of 2j5b by Molmil
Structure of the Tyrosyl tRNA synthetase from Acanthamoeba polyphaga Mimivirus complexed with tyrosynol
Descriptor: 4-[(2S)-2-amino-3-hydroxypropyl]phenol, TYROSYL-TRNA SYNTHETASE
Authors:Abergel, C, Rudinger-thirion, J, Giege, R, Claverie, J.M.
Deposit date:2006-09-13
Release date:2007-09-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Virus-Encoded Aminoacyl-tRNA Synthetases: Structural and Functional Characterization of Mimivirus Tyrrs and Metrs.
J.Virol., 81, 2007
1OAP
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Mad structure of the periplasmique domain of the Escherichia coli PAL protein
Descriptor: PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN, SULFATE ION
Authors:Abergel, C, Walburger, A, Bouveret, E, Claverie, J.M.
Deposit date:2003-01-20
Release date:2004-02-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystallization and preliminary crystallographic study of the peptidoglycan-associated lipoprotein from Escherichia coli.
Acta Crystallogr.,Sect.D, 57, 2001
1MZR
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BU of 1mzr by Molmil
Structure of dkga from E.coli at 2.13 A resolution solved by molecular replacement
Descriptor: 2,5-diketo-D-gluconate reductase A, GLYCEROL, PHOSPHATE ION
Authors:Abergel, C, Jeudy, S, Monchois, V, Claverie, J.M, Bacterial targets at IGS-CNRS, France (BIGS)
Deposit date:2002-10-09
Release date:2003-10-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structure of Escherichia coli DkgA, a broad-specificity aldo-keto reductase.
Proteins, 62, 2006
1UUZ
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IVY:A NEW FAMILY OF PROTEIN
Descriptor: INHIBITOR OF VERTEBRATE LYSOZYME, LYSOZYME C
Authors:Abergel, C, Lembo, F, Byrne, D, Maza, C, Claverie, J.M.
Deposit date:2004-01-12
Release date:2004-01-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and Evolution of the Ivy Protein Family, Unexpected Lysozyme Inhibitors in Gram-Negative Bacteria.
Proc.Natl.Acad.Sci.USA, 104, 2007
1UV0
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Pancreatitis-associated protein 1 from human
Descriptor: PANCREATITIS-ASSOCIATED PROTEIN 1, ZINC ION
Authors:Abergel, C, Shepard, W, Christal, L.
Deposit date:2004-01-12
Release date:2004-01-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystallization and preliminary crystallographic study of HIP/PAP, a human C-lectin overexpressed in primary liver cancers.
Acta Crystallogr.,Sect.D, 55, 1999
2HH9
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Thiamin pyrophosphokinase from Candida albicans
Descriptor: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM, MAGNESIUM ION, Thiamin pyrophosphokinase
Authors:Abergel, C, Santini, S, Monchois, V, Rousselle, T, Claverie, J.M, Bacterial targets at IGS-CNRS, France (BIGS)
Deposit date:2006-06-28
Release date:2006-07-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural characterization of CA1462, the Candida albicans thiamine pyrophosphokinase.
Bmc Struct.Biol., 8, 2008
2G9Z
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Thiamin pyrophosphokinase from Candida albicans
Descriptor: 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-(2-{[HYDROXY(PHOSPHONOAMINO)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-I UM, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Abergel, C, Santini, S, Monchois, V, Rousselle, T, Claverie, J.M, Bacterial targets at IGS-CNRS, France (BIGS)
Deposit date:2006-03-07
Release date:2006-04-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural characterization of CA1462, the Candida albicans thiamine pyrophosphokinase.
Bmc Struct.Biol., 8, 2008
4U4I
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BU of 4u4i by Molmil
Megavirus chilensis superoxide dismutase
Descriptor: Cu/Zn superoxide dismutase
Authors:Lartigue, A, Claverie, J.-M, Burlat, B, Coutard, B, Abergel, C.
Deposit date:2014-07-23
Release date:2014-11-05
Last modified:2014-12-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The megavirus chilensis cu,zn-superoxide dismutase: the first viral structure of a typical cellular copper chaperone-independent hyperstable dimeric enzyme.
J.Virol., 89, 2015
8ORS
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BU of 8ors by Molmil
Knockout of GMC-oxidoreductase genes reveals that functional redundancy preserves mimivirus essential functions
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative GMC-type oxidoreductase
Authors:Alempic, J.M, Bisio, H, Villalta, A, Santini, S, Lartigue, A, Schmitt, A, Bugnot, C, Notaro, A, Belmudes, L, Adrait, A, Poirot, O, Ptchelkine, D, De Castro, C, Coute, Y, Abergel, C.
Deposit date:2023-04-17
Release date:2024-04-17
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Functional redundancy revealed by the deletion of the mimivirus GMC-oxidoreductase genes.
Microlife, 5, 2024
8ORH
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BU of 8orh by Molmil
Knockout of GMC-oxidoreductase genes reveals that functional redundancy preserves mimivirus essential functions
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative GMC-type oxidoreductase
Authors:Alempic, J.M, Bisio, H, Villalta, A, Santini, S, Lartigue, A, Schmitt, A, Bugnot, C, Notaro, A, Belmudes, L, Adrait, A, Poirot, O, Ptchelkine, D, De Castro, C, Coute, Y, Abergel, C.
Deposit date:2023-04-14
Release date:2024-04-17
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Functional redundancy revealed by the deletion of the mimivirus GMC-oxidoreductase genes.
Microlife, 5, 2024
4TQG
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BU of 4tqg by Molmil
Crystal structure of Megavirus UDP-GlcNAc 4,6-dehydratase, 5-epimerase Mg534
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative dTDP-d-glucose 4 6-dehydratase
Authors:Jeudy, S, Piacente, F, De Castro, C, Molinaro, A, Salis, A, Damonte, G, Bernardi, C, Tonetti, M, Claverie, J.M, Abergel, C.
Deposit date:2014-06-11
Release date:2014-06-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Giant Virus Megavirus chilensis Encodes the Biosynthetic Pathway for Uncommon Acetamido Sugars.
J.Biol.Chem., 289, 2014
4WSE
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BU of 4wse by Molmil
Crystal structure of the Mimivirus polyadenylate synthase
Descriptor: Putative poly(A) polymerase catalytic subunit
Authors:Priet, S, Lartigue, A, Claverie, J.M, Abergel, C.
Deposit date:2014-10-27
Release date:2015-04-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:mRNA maturation in giant viruses: variation on a theme.
Nucleic Acids Res., 43, 2015
4XUL
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BU of 4xul by Molmil
Crystal structure of M. chilensis Mg662 protein complexed with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, SODIUM ION, ...
Authors:Lartigue, A, Priet, S, Claverie, J.M, Abergel, C.
Deposit date:2015-01-26
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal structure of M. chilensis Mg662 protein complexed with GTP
To Be Published
7PTV
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BU of 7ptv by Molmil
Structure of the Mimivirus genomic fibre asymmetric unit
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative glucose-methanol-choline oxidoreductase protein
Authors:Villalta, A, Schmitt, A, Estrozi, L.F, Quemin, E.R.J, Alempic, J.M, Lartigue, A, Prazak, V, Belmudes, L, Vasishtan, D, Colmant, A.M.G, Honore, F.A, Coute, Y, Grunewald, K, Abergel, C.
Deposit date:2021-09-27
Release date:2022-08-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The giant mimivirus 1.2 Mb genome is elegantly organized into a 30 nm diameter helical protein shield.
Elife, 11, 2022
4P37
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Crystal structure of the Megavirus polyadenylate synthase
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Priet, S, Lartigue, A, Claverie, J.M, Abergel, C.
Deposit date:2014-03-06
Release date:2015-04-01
Last modified:2015-04-29
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:mRNA maturation in giant viruses: variation on a theme.
Nucleic Acids Res., 43, 2015
7YX3
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Structure of the Mimivirus genomic fibre in its compact 6-start helix form
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative GMC-type oxidoreductase
Authors:Villalta, A, Schmitt, A, Estrozi, L.F, Quemin, E.R.J, Alempic, J.M, Lartigue, A, Prazak, V, Belmudes, L, Vasishtan, D, Colmant, A.M.G, Honore, F.A, Coute, Y, Grunewald, K, Abergel, C.
Deposit date:2022-02-15
Release date:2022-08-10
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The giant mimivirus 1.2 Mb genome is elegantly organized into a 30-nm diameter helical protein shield.
Elife, 11, 2022
7YX4
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Structure of the Mimivirus genomic fibre in its compact 5-start helix form
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative glucose-methanol-choline oxidoreductase protein
Authors:Villalta, A, Schmitt, A, Estrozi, L.F, Quemin, E.R.J, Alempic, J.M, Lartigue, A, Prazak, V, Belmudes, L, Vasishtan, D, Colmant, A.M.G, Honore, F.A, Coute, Y, Grunewald, K, Abergel, C.
Deposit date:2022-02-15
Release date:2022-08-10
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The giant mimivirus 1.2 Mb genome is elegantly organized into a 30 nm diameter helical protein shield.
Elife, 11, 2022
2B8Q
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X-ray structure of Acanthamoeba ployphaga mimivirus nucleoside diphosphate kinase complexed with TDP
Descriptor: MAGNESIUM ION, PHOSPHATE ION, Probable nucleoside diphosphate kinase, ...
Authors:Jeudy, S, Claverie, J.M, Abergel, C.
Deposit date:2005-10-10
Release date:2005-11-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.
J.Virol., 83, 2009
2B8P
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Crystal structure of Acanthamoeba polyphaga mimivirus NDK, the first viral nucleoside diphosphate kinase
Descriptor: Probable nucleoside diphosphate kinase, SULFATE ION
Authors:Jeudy, S, Claverie, J.M, Abergel, C.
Deposit date:2005-10-10
Release date:2005-11-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.
J.Virol., 83, 2009

 

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