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7EBD
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BU of 7ebd by Molmil
Bacterial STING in complex with c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ACETATE ION, TIR-like domain-containing protein
Authors:Ko, T.-P, Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2021-03-09
Release date:2021-09-15
Last modified:2022-01-19
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure and functional implication of bacterial STING.
Nat Commun, 13, 2022
7EBL
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BU of 7ebl by Molmil
Bacterial STING in complex with c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), STING
Authors:Ko, T.-P, Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2021-03-10
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structure and functional implication of bacterial STING.
Nat Commun, 13, 2022
7D4U
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BU of 7d4u by Molmil
ATP complex with double mutant cyclic trinucleotide synthase CdnD
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cyclic AMP-AMP-GMP synthase
Authors:Yang, C.-S, Hou, M.-H, Tsai, C.-L, Wang, Y.-C, Ko, T.-P, Chen, Y.
Deposit date:2020-09-24
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure and functional implication of a bacterial cyclic AMP-AMP-GMP synthetase.
Nucleic Acids Res., 49, 2021
7D4S
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BU of 7d4s by Molmil
apo-form cyclic trinucleotide synthase CdnD
Descriptor: Cyclic AMP-AMP-GMP synthase, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION
Authors:Yang, C.-S, Hou, M.-H, Tsai, C.-L, Wang, Y.-C, Ko, T.-P, Chen, Y.
Deposit date:2020-09-24
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure and functional implication of a bacterial cyclic AMP-AMP-GMP synthetase.
Nucleic Acids Res., 49, 2021
7D4O
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BU of 7d4o by Molmil
cyclic trinucleotide synthase CdnD in complex with ATP and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cyclic AMP-AMP-GMP synthase, ...
Authors:Yang, C.-S, Hou, M.-H, Tsai, C.-L, Wang, Y.-C, Ko, T.-P, Chen, Y.
Deposit date:2020-09-24
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure and functional implication of a bacterial cyclic AMP-AMP-GMP synthetase.
Nucleic Acids Res., 49, 2021
7D48
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BU of 7d48 by Molmil
apo-form cyclic trinucleotide synthase CdnD
Descriptor: Cyclic AMP-AMP-GMP synthase, SODIUM ION
Authors:Yang, C.-S, Hou, M.-H, Tsai, C.-L, Wang, Y.-C, Ko, T.-P, Chen, Y.
Deposit date:2020-09-23
Release date:2021-03-17
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure and functional implication of a bacterial cyclic AMP-AMP-GMP synthetase.
Nucleic Acids Res., 49, 2021
7D4J
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BU of 7d4j by Molmil
ddATP complex of cyclic trinucleotide synthase CdnD
Descriptor: 2',3'-dideoxyadenosine triphosphate, Cyclic AMP-AMP-GMP synthase, MAGNESIUM ION
Authors:Yang, C.-S, Hou, M.-H, Tsai, C.-L, Wang, Y.-C, Ko, T.-P, Chen, Y.
Deposit date:2020-09-24
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure and functional implication of a bacterial cyclic AMP-AMP-GMP synthetase.
Nucleic Acids Res., 49, 2021
4AKF
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BU of 4akf by Molmil
Crystal structure of VipD from Legionella pneumophila
Descriptor: VIPD
Authors:Lee, K.-H, Ku, B, Oh, B.-H.
Deposit date:2012-02-22
Release date:2012-12-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Vipd of Legionella Pneumophila Targets Activated Rab5 and Rab22 to Interfere with Endosomal Trafficking in Macrophages
Plos Pathog., 8, 2012
7YIB
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BU of 7yib by Molmil
Crystal structure of wild-type Cap4 SAVED domain-containing receptor from Enterobacter cloacae
Descriptor: CD-NTase-associated protein 4, CHLORIDE ION
Authors:Ko, T.-P, Yang, C.-S, Hou, M.-H, Wang, Y.-C, Chen, Y.
Deposit date:2022-07-15
Release date:2023-05-31
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Specific recognition of cyclic oligonucleotides by Cap4 for phage infection.
Int.J.Biol.Macromol., 237, 2023
7YIA
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BU of 7yia by Molmil
Crystal structure of K74A mutant of Cap4 SAVED domain-containing receptor from Enterobacter cloacae
Descriptor: CD-NTase-associated protein 4, MAGNESIUM ION
Authors:Ko, T.-P, Yang, C.-S, Hou, M.-H, Wang, Y.-C, Chen, Y.
Deposit date:2022-07-15
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.428 Å)
Cite:Specific recognition of cyclic oligonucleotides by Cap4 for phage infection.
Int.J.Biol.Macromol., 237, 2023
8HYK
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BU of 8hyk by Molmil
CD-NTase EfCdnE in complex with intermediate pppU[2'-5']p
Descriptor: EfCdnE, MAGNESIUM ION, [[(2R,3R,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Ko, T.-P, Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2023-01-06
Release date:2023-07-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.021 Å)
Cite:Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases.
Nat Commun, 14, 2023
8HWJ
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BU of 8hwj by Molmil
Bacterial STING from Epilithonimonas lactis in complex with 3'3'-c-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, CD-NTase-associated protein 12
Authors:Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2022-12-30
Release date:2024-01-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.553 Å)
Cite:Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING.
Nat Commun, 14, 2023
8HWI
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BU of 8hwi by Molmil
Bacterial STING from Larkinella arboricola in complex with 3'3'-c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CD-NTase-associated protein 12
Authors:Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2022-12-30
Release date:2024-01-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING.
Nat Commun, 14, 2023
8HYN
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BU of 8hyn by Molmil
Bacterial STING from Riemerella anatipestifer
Descriptor: CD-NTase-associated protein 12, TETRAETHYLENE GLYCOL
Authors:Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2023-01-07
Release date:2024-01-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.089 Å)
Cite:Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING.
Nat Commun, 14, 2023
8HY9
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BU of 8hy9 by Molmil
Bacterial STING from Riemerella anatipestifer in complex with 3'3'-c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, CD-NTase-associated protein 12
Authors:Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2023-01-06
Release date:2024-01-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.462 Å)
Cite:Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING.
Nat Commun, 14, 2023
8HY8
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BU of 8hy8 by Molmil
Bacterial STING from Epilithonimonas lactis
Descriptor: CD-NTase-associated protein 12
Authors:Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2023-01-06
Release date:2024-01-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.568 Å)
Cite:Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING.
Nat Commun, 14, 2023

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PDB entries from 2024-05-15

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