Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5F9G
DownloadVisualize
BU of 5f9g by Molmil
pnGFP1.5-Y.Cro: circularly permuted green fluorescent protein (with a tyrosine-derived chromophore)
Descriptor: pnGFP1.5-Y.Cro,Green fluorescent protein
Authors:Remington, S.J.
Deposit date:2015-12-09
Release date:2016-02-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.772 Å)
Cite:pnGFP: circularly permuted green fluorescent protein
To Be Published
1XA9
DownloadVisualize
BU of 1xa9 by Molmil
Crystal structure of yellow fluorescent protein zFP538 K66M green mutant
Descriptor: BETA-MERCAPTOETHANOL, fluorescent protein FP538
Authors:Remington, S.J, Wachter, R.M, Yarbrough, D.K, Branchaud, B, Anderson, D.C, Kallio, K, Lukyanov, K.A.
Deposit date:2004-08-25
Release date:2005-02-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:zFP538, a yellow-fluorescent protein from Zoanthus, contains a novel three-ring chromophore.
Biochemistry, 44, 2005
1XAE
DownloadVisualize
BU of 1xae by Molmil
Crystal structure of wild type yellow fluorescent protein zFP538 from Zoanthus
Descriptor: BETA-MERCAPTOETHANOL, fluorescent protein FP538
Authors:Remington, S.J, Wachter, R.M, Yarbrough, D.K, Branchaud, B, Anderson, D.C, Kallio, K, Lukyanov, K.A.
Deposit date:2004-08-25
Release date:2005-02-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:zFP538, a yellow-fluorescent protein from Zoanthus, contains a novel three-ring chromophore.
Biochemistry, 44, 2005
5HZO
DownloadVisualize
BU of 5hzo by Molmil
GFP mutant S205G
Descriptor: D-MALATE, Green fluorescent protein, UNDECYL-MALTOSIDE
Authors:Remington, S.J, Trujillo, K.
Deposit date:2016-02-02
Release date:2016-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Ultrafast Dynamics and Mechanisms of Proton Transfer in the GFP S205G Mutant
To Be Published
4OGS
DownloadVisualize
BU of 4ogs by Molmil
Crystal structure of GFP S205A/T203V at 2.2 A resolution
Descriptor: CHLORIDE ION, Green fluorescent protein
Authors:Remington, S.J, Saif, M.
Deposit date:2014-01-16
Release date:2014-05-14
Last modified:2014-06-18
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Insight into the structure and the mechanism of the slow proton transfer in the GFP double mutant T203V/S205A.
Phys Chem Chem Phys, 16, 2014
1WHT
DownloadVisualize
BU of 1wht by Molmil
STRUCTURE OF THE COMPLEX OF L-BENZYLSUCCINATE WITH WHEAT SERINE CARBOXYPEPTIDASE II AT 2.0 ANGSTROMS RESOLUTION
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, L-BENZYLSUCCINIC ACID, ...
Authors:Bullock, T.L, Remington, S.J.
Deposit date:1994-03-07
Release date:1994-06-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the complex of L-benzylsuccinate with wheat serine carboxypeptidase II at 2.0-A resolution.
Biochemistry, 33, 1994
1F0B
DownloadVisualize
BU of 1f0b by Molmil
CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Wachter, R.M, Yarbrough, D, Kallio, K, Remington, S.J.
Deposit date:2000-05-15
Release date:2000-11-17
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic and energetic analysis of binding of selected anions to the yellow variants of green fluorescent protein.
J.Mol.Biol., 301, 2000
1F3G
DownloadVisualize
BU of 1f3g by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE ESCHERICHIA COLI PHOSPHOCARRIER PROTEIN III GLC
Descriptor: GLUCOSE-SPECIFIC PHOSPHOCARRIER PROTEIN IIAGLC
Authors:Worthylake, D, Meadow, N, Roseman, S, Liao, D.-I, Herzberg, O, Remington, S.J.
Deposit date:1991-08-28
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three-dimensional structure of the Escherichia coli phosphocarrier protein IIIglc.
Proc.Natl.Acad.Sci.USA, 88, 1991
2F3G
DownloadVisualize
BU of 2f3g by Molmil
IIAGLC CRYSTAL FORM III
Descriptor: GLUCOSE-SPECIFIC PHOSPHOCARRIER
Authors:Feese, M, Comolli, L, Meadow, N, Roseman, S, Remington, S.J.
Deposit date:1997-10-14
Release date:1998-01-28
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural studies of the Escherichia coli signal transducing protein IIAGlc: implications for target recognition.
Biochemistry, 36, 1997
2QLI
DownloadVisualize
BU of 2qli by Molmil
mPlum E16Q mutant
Descriptor: Fluorescent protein plum
Authors:Shu, X, Remington, S.J.
Deposit date:2007-07-12
Release date:2008-07-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Structural Studies of Far-Red Emission in mPlum, a Monomeric Red Fluorescent Protein
To be Published
2QLE
DownloadVisualize
BU of 2qle by Molmil
GFP/S205V mutant
Descriptor: Green fluorescent protein, IMIDAZOLE
Authors:Shu, X, Remington, S.J.
Deposit date:2007-07-12
Release date:2008-02-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:An alternative excited-state proton transfer pathway in green fluorescent protein variant S205V.
Protein Sci., 16, 2007
3UB8
DownloadVisualize
BU of 3ub8 by Molmil
Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with formamide bound
Descriptor: FORMAMIDE, GLYCEROL, SULFATE ION, ...
Authors:Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J.
Deposit date:2011-10-23
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB.
Structure, 20, 2012
3UB9
DownloadVisualize
BU of 3ub9 by Molmil
Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with hydroxyurea bound
Descriptor: GLYCEROL, N-HYDROXYUREA, SULFATE ION, ...
Authors:Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J.
Deposit date:2011-10-23
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB.
Structure, 20, 2012
3UB6
DownloadVisualize
BU of 3ub6 by Molmil
Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with urea bound
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ...
Authors:Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J.
Deposit date:2011-10-23
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB.
Structure, 20, 2012
5CSC
DownloadVisualize
BU of 5csc by Molmil
STRUCTURE OF AN OPEN FORM OF CHICKEN HEART CITRATE SYNTHASE AT 2.8 ANGSTROMS RESOLUTION
Descriptor: CITRATE SYNTHASE
Authors:Liao, D.-I, Karpusas, M, Remington, S.J.
Deposit date:1990-05-07
Release date:1991-04-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of an open conformation of citrate synthase from chicken heart at 2.8-A resolution
Biochemistry, 30, 1991
5CTS
DownloadVisualize
BU of 5cts by Molmil
PROPOSED MECHANISM FOR THE CONDENSATION REACTION OF CITRATE SYNTHASE. 1.9-ANGSTROMS STRUCTURE OF THE TERNARY COMPLEX WITH OXALOACETATE AND CARBOXYMETHYL COENZYME A
Descriptor: CARBOXYMETHYL COENZYME *A, CITRATE SYNTHASE, OXALOACETATE ION
Authors:Karpusas, M, Branchaud, B, Remington, S.J.
Deposit date:1989-11-16
Release date:1990-10-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Proposed mechanism for the condensation reaction of citrate synthase: 1.9-A structure of the ternary complex with oxaloacetate and carboxymethyl coenzyme A.
Biochemistry, 29, 1990
6CSC
DownloadVisualize
BU of 6csc by Molmil
CHICKEN CITRATE SYNTHASE COMPLEX WITH TRIFLUOROACETONYL-COA AND CITRATE
Descriptor: CITRATE SYNTHASE, CITRIC ACID, TRIFLUOROACETONYL COENZYME A
Authors:Usher, K.C, Remington, S.J.
Deposit date:1997-06-19
Release date:1997-12-24
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Trifluoroacetonyl Coenzyme A, an Inhibitor of Citrate Synthase, Binds in a Combination of Productive and Nonproductive Modes
To be Published
6CTS
DownloadVisualize
BU of 6cts by Molmil
PROPOSED MECHANISM FOR THE CONDENSATION REACTION OF CITRATE SYNTHASE. 1.9-ANGSTROMS STRUCTURE OF THE TERNARY COMPLEX WITH OXALOACETATE AND CARBOXYMETHYL COENZYME A
Descriptor: CITRATE SYNTHASE, CITRYL-THIOETHER-COENZYME *A
Authors:Karpusas, M, Branchaud, B, Remington, S.J.
Deposit date:1989-11-16
Release date:1990-10-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Proposed mechanism for the condensation reaction of citrate synthase: 1.9-A structure of the ternary complex with oxaloacetate and carboxymethyl coenzyme A.
Biochemistry, 29, 1990
2TMY
DownloadVisualize
BU of 2tmy by Molmil
CHEY FROM THERMOTOGA MARITIMA (APO-II)
Descriptor: CHEY PROTEIN
Authors:Usher, K.C, De La Cruz, A, Dahlquist, F.W, Remington, S.J.
Deposit date:1997-05-19
Release date:1997-12-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of CheY from Thermotoga maritima do not support conventional explanations for the structural basis of enhanced thermostability.
Protein Sci., 7, 1998
7K5N
DownloadVisualize
BU of 7k5n by Molmil
Ligand binding domain (tandem PAS/dCache) of Aeromonas caviae diguanylate cyclase with proline bound
Descriptor: GLYCEROL, PROLINE, Sensor domain-containing diguanylate cyclase
Authors:Sweeney, E.G, Remington, S.J.
Deposit date:2020-09-17
Release date:2021-08-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Host-emitted amino acid cues regulate bacterial chemokinesis to enhance colonization.
Cell Host Microbe, 29, 2021
3SC2
DownloadVisualize
BU of 3sc2 by Molmil
REFINED ATOMIC MODEL OF WHEAT SERINE CARBOXYPEPTIDASE II AT 2.2-ANGSTROMS RESOLUTION
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SERINE CARBOXYPEPTIDASE II (CPDW-II), alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Liao, D.-I, Remington, S.J.
Deposit date:1992-07-01
Release date:1993-10-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Refined atomic model of wheat serine carboxypeptidase II at 2.2-A resolution.
Biochemistry, 31, 1992
4CSC
DownloadVisualize
BU of 4csc by Molmil
STRUCTURE OF TERNARY COMPLEXES OF CITRATE SYNTHASE WITH D-AND L-MALATE: MECHANISTIC IMPLICATIONS
Descriptor: ACETYL COENZYME *A, CITRATE SYNTHASE, D-MALATE
Authors:Karpusas, M, Holland, D, Remington, S.J.
Deposit date:1990-05-07
Release date:1991-04-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:1.9-A structures of ternary complexes of citrate synthase with D- and L-malate: mechanistic implications.
Biochemistry, 30, 1991
1GLF
DownloadVisualize
BU of 1glf by Molmil
CRYSTAL STRUCTURES OF ESCHERICHIA COLI GLYCEROL KINASE AND THE MUTANT A65T IN AN INACTIVE TETRAMER: CONFORMATIONAL CHANGES AND IMPLICATIONS FOR ALLOSTERIC REGULATION
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, PHOSPHATE ION, ...
Authors:Feese, M.D, Faber, H.R, Bystrom, C.E, Pettigrew, D.W, Remington, S.J.
Deposit date:1998-08-30
Release date:1998-10-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Glycerol kinase from Escherichia coli and an Ala65-->Thr mutant: the crystal structures reveal conformational changes with implications for allosteric regulation.
Structure, 6, 1998
2CSC
DownloadVisualize
BU of 2csc by Molmil
Structure of ternary complexes of CITRATE SYNTHASE WITH D-AND L-MALATE: mechanistic implications
Descriptor: CARBOXYMETHYL COENZYME *A, CITRATE SYNTHASE, D-MALATE
Authors:Karpusas, M, Holland, D, Remington, S.J.
Deposit date:1990-05-07
Release date:1991-04-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:1.9-A structures of ternary complexes of citrate synthase with D- and L-malate: mechanistic implications.
Biochemistry, 30, 1991
3GJ2
DownloadVisualize
BU of 3gj2 by Molmil
Photoactivated state of PA-GFP
Descriptor: CHLORIDE ION, Green fluorescent protein
Authors:Henderson, J.N, Gepshtein, R, Heenan, J.R, Kallio, K, Huppert, D, Remington, S.J.
Deposit date:2009-03-07
Release date:2009-03-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of the photoactivatable green fluorescent protein.
J.Am.Chem.Soc., 131, 2009

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon