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5LSN
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BU of 5lsn by Molmil
SINEB2 element of the long non-coding RNA activator of translation AS Uchl1
Descriptor: RNA (29-MER)
Authors:Podbevsek, P, Plavec, J.
Deposit date:2016-09-05
Release date:2017-09-20
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Structural determinants of the SINE B2 element embedded in the long non-coding RNA activator of translation AS Uchl1.
Sci Rep, 8, 2018
5M4W
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BU of 5m4w by Molmil
Structure of DNA AGCGA-quadruplex adopted by 15-mer oligonucleotide found in regulatory region of the PLEKHG3 human gene with G11 to I11 mutation, d(GCGAGGGAGCIAGGG),VK34_I11
Descriptor: DNA (5'-D(*GP*CP*GP*AP*GP*GP*GP*AP*GP*CP*IP*AP*GP*GP*G)-3')
Authors:Kocman, V, Plavec, J.
Deposit date:2016-10-19
Release date:2017-05-31
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Tetrahelical structural family adopted by AGCGA-rich regulatory DNA regions.
Nat Commun, 8, 2017
5MTA
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BU of 5mta by Molmil
G-quadruplex formed within promoters of Plasmodium falciparum B var genes
Descriptor: UpsB-Q-1, DNA (34-MER)
Authors:Juribasic Kulcsar, M, Plavec, J.
Deposit date:2017-01-09
Release date:2018-02-28
Last modified:2019-06-19
Method:SOLUTION NMR
Cite:Stabilizing interactions in long-loop G-quadruplex formed within promoters of Plasmodium falciparum B var genes
To Be Published
5MTG
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BU of 5mtg by Molmil
G-quadruplex formed within promoters of Plasmodium falciparum B var genes - form I
Descriptor: UpsB-Q-1 DNA (34-MER)
Authors:Juribasic Kulcsar, M, Plavec, J.
Deposit date:2017-01-09
Release date:2018-02-28
Last modified:2019-06-19
Method:SOLUTION NMR
Cite:Stabilizing interactions in long-loop G-quadruplex formed within promoters of Plasmodium falciparum B var genes
To Be Published
2LOD
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BU of 2lod by Molmil
Solution-state structure of an intramolecular G-quadruplex with propeller, diagonal and edgewise loops
Descriptor: DNA (5'-D(*GP*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*GP*AP*CP*GP*GP*G)-3')
Authors:Marusic, M, Sket, P, Bauer, L, Viglasky, V, Plavec, J.
Deposit date:2012-01-23
Release date:2012-05-30
Last modified:2012-08-15
Method:SOLUTION NMR
Cite:Solution-state structure of an intramolecular G-quadruplex with propeller, diagonal and edgewise loops.
Nucleic Acids Res., 40, 2012
2LED
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BU of 2led by Molmil
Unique structural features of interconverting monomeric and dimeric G-quadruplexes adopted by a sequence from intron of N-myc gene
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*CP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*A)-3')
Authors:Trajkovski, M, Plavec, J, Webba da Silva, M.
Deposit date:2011-06-15
Release date:2012-03-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Unique Structural Features of Interconverting Monomeric and Dimeric G-Quadruplexes Adopted by a Sequence from the Intron of the N-myc Gene.
J.Am.Chem.Soc., 134, 2012
2LFT
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BU of 2lft by Molmil
Human prion protein with E219K protective polymorphism
Descriptor: Major prion protein
Authors:Biljan, I, Ilc, G, Giacin, G, Zhukov, I, Plavec, J, Legname, G.
Deposit date:2011-07-14
Release date:2012-06-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for the protective effect of the human prion protein carrying the dominant-negative E219K polymorphism.
Biochem.J., 446, 2012
2LV1
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BU of 2lv1 by Molmil
Solution-state NMR structure of prion protein mutant V210I at neutral pH
Descriptor: Major prion protein
Authors:Biljan, I, Ilc, G, Giachin, G, Legname, G, Plavec, J.
Deposit date:2012-06-26
Release date:2012-09-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Rearrangements at Physiological pH: Nuclear Magnetic Resonance Insights from the V210I Human Prion Protein Mutant.
Biochemistry, 51, 2012
2MJJ
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BU of 2mjj by Molmil
A tetrahelical DNA fold adopted by alternating GGG and GCG tracts
Descriptor: 5'-D(*GP*GP*GP*AP*GP*CP*GP*AP*GP*GP*GP*AP*GP*CP*G)-3'
Authors:Kocman, V, Plavec, J.
Deposit date:2014-01-10
Release date:2014-12-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A tetrahelical DNA fold adopted by tandem repeats of alternating GGG and GCG tracts.
Nat Commun, 5, 2014
2MAE
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BU of 2mae by Molmil
Transmembrane-cytosolic part of Trop2 explored by NMR and Molecular Dynamics
Descriptor: Tumor-associated calcium signal transducer 2
Authors:Vidmar, T, Pavi, M, Ilc, G, Plavec, J, Lenari, B.
Deposit date:2013-07-08
Release date:2014-07-09
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Transmembrane-cytosolic part of Trop2 explored by NMR and Molecular Dynamics
To be Published
2M39
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BU of 2m39 by Molmil
The solution structure of 3',5'-LINKED 2'-O-(2-METHOXYETHYL)-RNA DUPLEX
Descriptor: RNA (5'-R(*(C5L)P*(G48)P*(C5L)P*(G48)P*(A44)P*(A44)P*(T39)P*(T39)P*(C5L)P*(G48)P*(C5L)P*DG)-3')
Authors:Plevnik, M, Cevec, M, Plavec, J.
Deposit date:2013-01-15
Release date:2013-11-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structure of 2'-O-(2-methoxyethyl) modified and C5-methylated RNA dodecamer duplex.
Biochimie, 95, 2013
2MVK
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BU of 2mvk by Molmil
Solution structure of phosphorylated cytosolic part of Trop2
Descriptor: Tumor-associated calcium signal transducer 2
Authors:Ilc, G, Plavec, J, Vidmar, T, Pavsic, M, Lenarcic, B.
Deposit date:2014-10-08
Release date:2015-05-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The cytosolic tail of the tumor marker protein Trop2--a structural switch triggered by phosphorylation.
Sci Rep, 5, 2015
2MVL
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BU of 2mvl by Molmil
Solution structure of cytosolic part of Trop2
Descriptor: Tumor-associated calcium signal transducer 2
Authors:Ilc, G, Plavec, J, Vidmar, T, Pavsic, M, Lenarcic, B.
Deposit date:2014-10-08
Release date:2015-05-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The cytosolic tail of the tumor marker protein Trop2--a structural switch triggered by phosphorylation.
Sci Rep, 5, 2015
2N8Y
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BU of 2n8y by Molmil
Holo form of Calmodulin-Like Domain of Human Non-Muscle alpha-actinin 1
Descriptor: Alpha-actinin-1, CALCIUM ION
Authors:Drmota Prebil, S, Slapsak, U, de Almeida Ribeiro, E, Pavsic, M, Ilc, G, Zielinska, K, Hartl, M, Backman, L, Plavec, J, Lenarcic, B, Djinovic-Carugo, K.
Deposit date:2015-10-28
Release date:2016-06-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and calcium-binding studies of calmodulin-like domain of human non-muscle alpha-actinin-1.
Sci Rep, 6, 2016
2N8Z
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BU of 2n8z by Molmil
Apo form of Calmodulin-Like Domain of Human Non-Muscle alpha-actinin 1
Descriptor: Alpha-actinin-1
Authors:Drmota Prebil, S, Slapsak, U, de Almeida Ribeiro, E, Pavsic, M, Ilc, G, Zielinska, K, Hartl, M, Backman, L, Plavec, J, Lenarcic, B, Djinovic-Carugo, K.
Deposit date:2015-10-28
Release date:2016-06-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and calcium-binding studies of calmodulin-like domain of human non-muscle alpha-actinin-1.
Sci Rep, 6, 2016
8BM6
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BU of 8bm6 by Molmil
Hairpin adopted by oligonucleotide A36 found in the promoter of AUTS2 gene
Descriptor: A36
Authors:Novotny, A.
Deposit date:2022-11-10
Release date:2023-02-22
Last modified:2023-04-19
Method:SOLUTION NMR
Cite:Structural polymorphism driven by a register shift in a CGAG-rich region found in the promoter of the neurodevelopmental regulator AUTS2 gene.
Nucleic Acids Res., 51, 2023
8BM4
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BU of 8bm4 by Molmil
Hairpin adopted by modified oligonucleotide A32_mod found in the promoter of AUTS2 gene.
Descriptor: A32_mod
Authors:Novotny, A.
Deposit date:2022-11-10
Release date:2023-02-22
Last modified:2023-04-19
Method:SOLUTION NMR
Cite:Structural polymorphism driven by a register shift in a CGAG-rich region found in the promoter of the neurodevelopmental regulator AUTS2 gene.
Nucleic Acids Res., 51, 2023
8BM7
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BU of 8bm7 by Molmil
Hairpin adopted by oligonucleotide A38 found in the promoter of AUTS2 gene.
Descriptor: A38
Authors:Novotny, A.
Deposit date:2022-11-10
Release date:2023-02-22
Last modified:2023-04-19
Method:SOLUTION NMR
Cite:Structural polymorphism driven by a register shift in a CGAG-rich region found in the promoter of the neurodevelopmental regulator AUTS2 gene.
Nucleic Acids Res., 51, 2023
8A0W
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BU of 8a0w by Molmil
Crystal structure of the HigA2 antitoxin in complex with operator DNA
Descriptor: Antitoxin HigA-2, DNA (17-MER), PHOSPHATE ION
Authors:Hadzi, S, Loris, R.
Deposit date:2022-05-30
Release date:2023-05-03
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.334 Å)
Cite:Fuzzy recognition by the prokaryotic transcription factor HigA2 from Vibrio cholerae.
Nat Commun, 15, 2024
8Q4O
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BU of 8q4o by Molmil
RNA G-quadruplex from the 5'-UTR of human tyrosine kinase 2 (TYK2)
Descriptor: RNA (5'-R(*CP*GP*GP*UP*AP*GP*CP*GP*GP*GP*UP*AP*UP*GP*GP*GP*UP*CP*CP*GP*GP*GP*U)-3')
Authors:Toplishek, M, Kocman, V.
Deposit date:2023-08-07
Release date:2024-03-06
Method:SOLUTION NMR
Cite:High-Resolution Structure of RNA G-Quadruplex Containing Unique Structural Motifs Originating from the 5'-UTR of Human Tyrosine Kinase 2 (TYK2).
Acs Omega, 9, 2024
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