Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7XJH
DownloadVisualize
BU of 7xjh by Molmil
Isoproterenol-activated dog beta3 adrenergic receptor
Descriptor: Beta-3 adrenergic receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Shihoya, W, Nureki, O.
Deposit date:2022-04-18
Release date:2022-05-04
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of the beta 3-adrenergic receptor reveals the molecular basis of subtype selectivity.
Mol.Cell, 81, 2021
4GEL
DownloadVisualize
BU of 4gel by Molmil
Crystal structure of Zucchini
Descriptor: 1,2-ETHANEDIOL, Mitochondrial cardiolipin hydrolase, PHOSPHATE ION, ...
Authors:Nishimasu, H, Fukuhara, S, Ishitani, R, Nureki, O.
Deposit date:2012-08-02
Release date:2012-10-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.756 Å)
Cite:Structure and function of Zucchini endoribonuclease in piRNA biogenesis
Nature, 491, 2012
4GEN
DownloadVisualize
BU of 4gen by Molmil
Crystal structure of Zucchini (monomer)
Descriptor: CHLORIDE ION, Mitochondrial cardiolipin hydrolase
Authors:Nishimasu, H, Fukuhara, S, Ishitani, R, Nureki, O.
Deposit date:2012-08-02
Release date:2012-10-17
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and function of Zucchini endoribonuclease in piRNA biogenesis
Nature, 491, 2012
4GEM
DownloadVisualize
BU of 4gem by Molmil
Crystal structure of Zucchini (K171A)
Descriptor: 1,2-ETHANEDIOL, Mitochondrial cardiolipin hydrolase, ZINC ION
Authors:Nishimasu, H, Fukuhara, S, Ishitani, R, Nureki, O.
Deposit date:2012-08-02
Release date:2012-10-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.206 Å)
Cite:Structure and function of Zucchini endoribonuclease in piRNA biogenesis
Nature, 491, 2012
7VSH
DownloadVisualize
BU of 7vsh by Molmil
Cryo-EM structure of a human ATP11C-CDC50A flippase reconstituted in the Nanodisc in E1P state.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell cycle control protein 50A, MAGNESIUM ION, ...
Authors:Nakanishii, H, Abe, K.
Deposit date:2021-10-26
Release date:2021-12-29
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM of the ATP11C flippase reconstituted in Nanodiscs shows a distended phospholipid bilayer inner membrane around transmembrane helix 2.
J.Biol.Chem., 298, 2022
7VSG
DownloadVisualize
BU of 7vsg by Molmil
Cryo-EM structure of a human ATP11C-CDC50A flippase reconstituted in the Nanodisc in PtdSer-occluded E2-Pi state.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell cycle control protein 50A, O-[(S)-({(2R)-2,3-bis[(9Z)-octadec-9-enoyloxy]propyl}oxy)(hydroxy)phosphoryl]-L-serine, ...
Authors:Nakanishii, H, Abe, K.
Deposit date:2021-10-26
Release date:2021-12-29
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM of the ATP11C flippase reconstituted in Nanodiscs shows a distended phospholipid bilayer inner membrane around transmembrane helix 2.
J.Biol.Chem., 298, 2022
7F47
DownloadVisualize
BU of 7f47 by Molmil
Cryo-EM structure of Rhizobium etli MprF
Descriptor: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, Hypothetical conserved protein, [(2R)-1-[[(2R)-3-[(2S)-2,6-bis(azanyl)hexanoyl]oxy-2-oxidanyl-propoxy]-oxidanyl-phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (E)-octadec-9-enoate
Authors:Nishimura, M, Hirano, H, Kobayashi, K, Gill, C.P, Phan, C.N.K, Kise, Y, Kusakizako, T, Yamashita, K, Ito, Y, Roy, H, Nishizawa, T, Nureki, O.
Deposit date:2021-06-17
Release date:2022-06-22
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structure of Rhizobium etli MprF
To Be Published
7C77
DownloadVisualize
BU of 7c77 by Molmil
Cryo-EM structure of mouse TLR3 in complex with UNC93B1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Protein unc-93 homolog B1, ...
Authors:Ohto, U, Ishida, H, Shimizu, T.
Deposit date:2020-05-23
Release date:2021-01-06
Last modified:2021-02-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of Toll-like receptors in complex with UNC93B1.
Nat.Struct.Mol.Biol., 28, 2021
7C76
DownloadVisualize
BU of 7c76 by Molmil
Cryo-EM structure of human TLR3 in complex with UNC93B1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Protein unc-93 homolog B1, ...
Authors:Ohto, U, Ishida, H, Shimizu, T.
Deposit date:2020-05-23
Release date:2021-01-06
Last modified:2021-02-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of Toll-like receptors in complex with UNC93B1.
Nat.Struct.Mol.Biol., 28, 2021
7CYN
DownloadVisualize
BU of 7cyn by Molmil
Cryo-EM structure of human TLR7 in complex with UNC93B1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Protein unc-93 homolog B1, ...
Authors:Ohto, U, Ishida, H, Shimizu, T.
Deposit date:2020-09-03
Release date:2021-01-06
Last modified:2021-02-24
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structures of Toll-like receptors in complex with UNC93B1.
Nat.Struct.Mol.Biol., 28, 2021
7E7Z
DownloadVisualize
BU of 7e7z by Molmil
CryoEM structure of the human Kv4.2-KChIP1 complex, transmembrane region
Descriptor: Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-02-28
Release date:2021-10-06
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E87
DownloadVisualize
BU of 7e87 by Molmil
CryoEM structure of the human Kv4.2-DPP6S complex, transmembrane and intracellular region
Descriptor: Dipeptidyl aminopeptidase-like protein 6, Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-03-01
Release date:2021-10-13
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E89
DownloadVisualize
BU of 7e89 by Molmil
CryoEM structure of human Kv4.2-DPP6S complex, extracellular region
Descriptor: Dipeptidyl aminopeptidase-like protein 6
Authors:Kise, Y, Nureki, O.
Deposit date:2021-03-01
Release date:2021-10-13
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E83
DownloadVisualize
BU of 7e83 by Molmil
CryoEM structure of the human Kv4.2-KChIP1 complex, intracellular region
Descriptor: Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-02-28
Release date:2021-10-13
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E84
DownloadVisualize
BU of 7e84 by Molmil
CryoEM structure of human Kv4.2-KChIP1 complex
Descriptor: Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-02-28
Release date:2021-10-13
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E8E
DownloadVisualize
BU of 7e8e by Molmil
CryoEM structure of human Kv4.2-DPP6S-KChIP1 complex, transmembrane and intracellular region
Descriptor: Dipeptidyl aminopeptidase-like protein 6, Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-03-01
Release date:2021-10-13
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E8G
DownloadVisualize
BU of 7e8g by Molmil
CryoEM structure of human Kv4.2-DPP6S-KChIP1 complex, extracellular region
Descriptor: Dipeptidyl aminopeptidase-like protein 6
Authors:Kise, Y, Nureki, O.
Deposit date:2021-03-01
Release date:2021-10-13
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E8B
DownloadVisualize
BU of 7e8b by Molmil
CryoEM structure of human Kv4.2-DPP6S complex
Descriptor: Dipeptidyl aminopeptidase-like protein 6, Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-03-01
Release date:2021-10-13
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E8H
DownloadVisualize
BU of 7e8h by Molmil
CryoEM structure of human Kv4.2-DPP6S-KChIP1 complex
Descriptor: Dipeptidyl aminopeptidase-like protein 6, Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-03-01
Release date:2021-10-13
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
6LN5
DownloadVisualize
BU of 6ln5 by Molmil
CryoEM structure of SERCA2b T1032stop in E1-2Ca2+-AMPPCP (class1)
Descriptor: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Zhang, Y, Tsutsumi, A, Watanabe, S, Inaba, K.
Deposit date:2019-12-28
Release date:2020-08-26
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
6LN9
DownloadVisualize
BU of 6ln9 by Molmil
CryoEM structure of SERCA2b T1032stop in E2-BeF3- state (class2)
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2
Authors:Zhang, Y, Tsutsumi, A, Watanabe, S, Inaba, K.
Deposit date:2019-12-28
Release date:2020-08-26
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
6LN7
DownloadVisualize
BU of 6ln7 by Molmil
CryoEM structure of SERCA2b T1032stop in E1-2Ca2+-AMPPCP (class3)
Descriptor: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Zhang, Y, Tsutsumi, A, Watanabe, S, Inaba, K.
Deposit date:2019-12-28
Release date:2020-08-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
6LN8
DownloadVisualize
BU of 6ln8 by Molmil
CryoEM structure of SERCA2b T1032stop in E2-BeF3- state (class1)
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2
Authors:Zhang, Y, Tsutsumi, A, Watanabe, S, Inaba, K.
Deposit date:2019-12-28
Release date:2020-08-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
6LN6
DownloadVisualize
BU of 6ln6 by Molmil
CryoEM structure of SERCA2b T1032stop in E1-2Ca2+-AMPPCP (class2)
Descriptor: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Zhang, Y, Tsutsumi, A, Watanabe, S, Inaba, K.
Deposit date:2019-12-28
Release date:2020-08-26
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
6LLE
DownloadVisualize
BU of 6lle by Molmil
CryoEM structure of SERCA2b WT in E1-2Ca2+-AMPPCP state.
Descriptor: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Zhang, Y, Tsutsumi, A, Watanabe, S, Inaba, K.
Deposit date:2019-12-23
Release date:2020-08-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon