Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5OM7
DownloadVisualize
BU of 5om7 by Molmil
Crystal structure of Alpha1-antichymotrypsin variant DBS-II: a drug-binding serpin for doxorubicin
Descriptor: Alpha-1-antichymotrypsin, DOXORUBICIN
Authors:Schmidt, K, Kern, A, Muller, Y.A.
Deposit date:2017-07-28
Release date:2018-05-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.727 Å)
Cite:Design of an allosterically modulated doxycycline and doxorubicin drug-binding protein.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5OM3
DownloadVisualize
BU of 5om3 by Molmil
Crystal structure of Alpha1-antichymotrypsin variant DBS-I5: a MMP14-cleavable drug-binding serpin for doxycycline
Descriptor: (4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE, Alpha-1-antichymotrypsin, DI(HYDROXYETHYL)ETHER
Authors:Schmidt, K, Muller, Y.A.
Deposit date:2017-07-28
Release date:2018-05-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design of an allosterically modulated doxycycline and doxorubicin drug-binding protein.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1JPT
DownloadVisualize
BU of 1jpt by Molmil
Crystal Structure of Fab D3H44
Descriptor: immunoglobulin Fab D3H44, heavy chain, immunoglobulin Fab D3h44, ...
Authors:Faelber, K, Kirchhofer, D, Presta, L, Kelley, R.F, Muller, Y.A.
Deposit date:2001-08-03
Release date:2002-02-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The 1.85 A resolution crystal structures of tissue factor in complex with humanized Fab D3h44 and of free humanized Fab D3h44: revisiting the solvation of antigen combining sites.
J.Mol.Biol., 313, 2001
1K6Q
DownloadVisualize
BU of 1k6q by Molmil
Crystal structure of antibody Fab fragment D3
Descriptor: immunoglobulin Fab D3, heavy chain, light chain
Authors:Faelber, K, Kelley, R.F, Kirchhofer, D, Muller, Y.A.
Deposit date:2001-10-17
Release date:2002-04-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of murine Fab D3 at 2.4 A resolution in comparison with the humanised Fab D3h44 (1.85A) provides structural insight into the humanisation process of the D3 anti-tissue factor antibody
To be Published
1KDM
DownloadVisualize
BU of 1kdm by Molmil
THE CRYSTAL STRUCTURE OF THE HUMAN SEX HORMONE-BINDING GLOBULIN (TETRAGONAL CRYSTAL FORM)
Descriptor: 5-ALPHA-DIHYDROTESTOSTERONE, CALCIUM ION, sex hormone-binding globulin
Authors:Grishkovskaya, I, Avvakumov, G.V, Hammond, G.L, Muller, Y.A.
Deposit date:2001-11-13
Release date:2002-05-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Resolution of a disordered region at the entrance of the human sex hormone-binding globulin steroid-binding site.
J.Mol.Biol., 318, 2002
1KDK
DownloadVisualize
BU of 1kdk by Molmil
THE STRUCTURE OF THE N-TERMINAL LG DOMAIN OF SHBG IN CRYSTALS SOAKED WITH EDTA
Descriptor: 5-ALPHA-DIHYDROTESTOSTERONE, Sex Hormone-Binding Globulin
Authors:Grishkovskaya, I, Avvakumov, G.V, Hammond, G.L, Muller, Y.A.
Deposit date:2001-11-13
Release date:2002-05-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Resolution of a disordered region at the entrance of the human sex hormone-binding globulin steroid-binding site.
J.Mol.Biol., 318, 2002
1RHF
DownloadVisualize
BU of 1rhf by Molmil
Crystal Structure of human Tyro3-D1D2
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, Tyrosine-protein kinase receptor TYRO3, ...
Authors:Heiring, C, Dahlback, B, Muller, Y.A.
Deposit date:2003-11-14
Release date:2004-03-23
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Ligand recognition and homophilic interactions in Tyro3: structural insights into the Axl/Tyro3 receptor tyrosine kinase family.
J.Biol.Chem., 279, 2004
3FK7
DownloadVisualize
BU of 3fk7 by Molmil
Crystal structure of TetR triple mutant (H64K, S135L, S138I) in complex with 4-ddma-atc
Descriptor: (4aS,12aS)-3,10,11,12a-tetrahydroxy-6-methyl-1,12-dioxo-1,4,4a,5,12,12a-hexahydrotetracene-2-carboxamide, MAGNESIUM ION, Tetracycline repressor protein class B from transposon Tn10, ...
Authors:Klieber, M.A, Scholz, O, Lochner, S, Gmeiner, P, Hillen, W, Muller, Y.A.
Deposit date:2008-12-16
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural origins for selectivity and specificity in an engineered bacterial repressor-inducer pair.
Febs J., 276, 2009
3FK6
DownloadVisualize
BU of 3fk6 by Molmil
Crystal structure of TetR triple mutant (H64K, S135L, S138I)
Descriptor: Tetracycline repressor protein class B from transposon Tn10, Tetracycline repressor protein class D
Authors:Klieber, M.A, Scholz, O, Lochner, S, Gmeiner, P, Hillen, W, Muller, Y.A.
Deposit date:2008-12-16
Release date:2009-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural origins for selectivity and specificity in an engineered bacterial repressor-inducer pair.
Febs J., 276, 2009
2YG2
DownloadVisualize
BU of 2yg2 by Molmil
Structure of apolioprotein M in complex with Sphingosine 1-Phosphate
Descriptor: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, APOLIPOPROTEIN M, CITRATE ANION
Authors:Christoffersen, C, Obinata, H, Gowda, S, Galvani, S, Ahnstrom, J, Sevvana, M, Egerer-Sieber, C, Muller, Y.A, Hla, T, Nielsen, L, Dahlback, B.
Deposit date:2011-04-11
Release date:2011-06-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Endothelium-Protective Sphingosine-1-Phosphate Provided by Hdl-Associated Apolipoprotein M.
Proc.Natl.Acad.Sci.USA, 108, 2011
4OSN
DownloadVisualize
BU of 4osn by Molmil
Crystal structure of engineered HCMV glycoprotein B Domain II
Descriptor: Envelope glycoprotein B
Authors:Diestel, U, Muller, Y.A.
Deposit date:2014-02-13
Release date:2014-08-13
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of engineered HCMV glycoprotein B Domain II
To be Published
4OT1
DownloadVisualize
BU of 4ot1 by Molmil
Structural Basis for the Recognition of Human Cytomegalovirus Glycoprotein B by the Neutralizing Human Antibody SM5-1
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Envelope glycoprotein B, ...
Authors:Diestel, U, Muller, Y.A.
Deposit date:2014-02-13
Release date:2014-08-13
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural basis for the recognition of human cytomegalovirus glycoprotein B by a neutralizing human antibody.
Plos Pathog., 10, 2014
4OSU
DownloadVisualize
BU of 4osu by Molmil
Crystal structure of HCMV gB-neutralizing SM5-1 Fab fragment
Descriptor: FORMIC ACID, SM5-1 Fab Heavy Chain, SM5-1 Fab Light Chain, ...
Authors:Diestel, U, Muller, Y.A.
Deposit date:2014-02-13
Release date:2014-08-13
Last modified:2014-10-22
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural basis for the recognition of human cytomegalovirus glycoprotein B by a neutralizing human antibody.
Plos Pathog., 10, 2014
5D5N
DownloadVisualize
BU of 5d5n by Molmil
Crystal Structure of the Human Cytomegalovirus pUL50-pUL53 Complex
Descriptor: Virion egress protein UL31 homolog, Virion egress protein UL34 homolog, ZINC ION
Authors:Walzer, S.A, Egerer-Sieber, C, Hohl, K, Sevvana, M, Muller, Y.A.
Deposit date:2015-08-11
Release date:2015-10-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Crystal Structure of the Human Cytomegalovirus pUL50-pUL53 Core Nuclear Egress Complex Provides Insight into a Unique Assembly Scaffold for Virus-Host Protein Interactions.
J.Biol.Chem., 290, 2015
4U0V
DownloadVisualize
BU of 4u0v by Molmil
Crystal structure of YvoA from Bacillus subtilis in complex with glucosamine-6-phosphate
Descriptor: 1,2-ETHANEDIOL, 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, HTH-type transcriptional repressor YvoA
Authors:Fillenberg, S.B, Muller, Y.A.
Deposit date:2014-07-14
Release date:2015-01-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
4U0W
DownloadVisualize
BU of 4u0w by Molmil
Crystal structure of YvoA from Bacillus subtilis in complex with N-acetylglucosamine-6-phosphate
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, GLYCEROL, ...
Authors:Fillenberg, S.B, Muller, Y.A.
Deposit date:2014-07-14
Release date:2015-01-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
4U0Y
DownloadVisualize
BU of 4u0y by Molmil
Crystal structure of the DNA-binding domains of YvoA in complex with palindromic operator DNA
Descriptor: CHLORIDE ION, DNA (5'-D(P*GP*TP*GP*GP*TP*CP*TP*AP*GP*AP*CP*CP*AP*CP*T)-3'), HTH-type transcriptional repressor YvoA
Authors:Fillenberg, S.B, Muller, Y.A.
Deposit date:2014-07-14
Release date:2015-01-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
2NS7
DownloadVisualize
BU of 2ns7 by Molmil
How an in vitro selected peptide mimics the antibiotic tetracycline to induce TET repressor
Descriptor: Tetracycline repressor protein
Authors:Luckner, S.R, Klotzsche, M, Berens, C, Hillen, W, Muller, Y.A.
Deposit date:2006-11-03
Release date:2007-07-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:How an agonist peptide mimics the antibiotic tetracycline to induce Tet-repressor
J.Mol.Biol., 368, 2007
2NS8
DownloadVisualize
BU of 2ns8 by Molmil
How an in vitro selected peptide mimics the antibiotic tetracycline to induce TET repressor
Descriptor: 16 residue peptide Tip (Transcription inducing peptide), Tetracycline repressor protein
Authors:Luckner, S.R, Klotzsche, M, Berens, C, Hillen, W, Muller, Y.A.
Deposit date:2006-11-03
Release date:2007-07-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:How an agonist peptide mimics the antibiotic tetracycline to induce Tet-repressor
J.Mol.Biol., 368, 2007
4WWC
DownloadVisualize
BU of 4wwc by Molmil
Crystal structure of full length YvoA in complex with palindromic operator DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(P*CP*AP*GP*TP*GP*GP*TP*CP*TP*AP*GP*AP*CP*CP*AP*CP*TP*GP*G)-3'), HTH-type transcriptional repressor YvoA
Authors:Grau, F.C, Fillenberg, S.B, Muller, Y.A.
Deposit date:2014-11-10
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.903 Å)
Cite:Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
4WIC
DownloadVisualize
BU of 4wic by Molmil
Immediate-early 1 protein (IE1) of rhesus macaque cytomegalovirus
Descriptor: RhUL123
Authors:Klingl, S, Scherer, M, Sevvana, M, Muller, Y.A, Stamminger, T.
Deposit date:2014-09-25
Release date:2015-07-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Controlled crystal dehydration triggers a space-group switch and shapes the tertiary structure of cytomegalovirus immediate-early 1 (IE1) protein.
Acta Crystallogr.,Sect.D, 71, 2015
4ZSI
DownloadVisualize
BU of 4zsi by Molmil
Crystal structure of the effector-binding domain of DasR (DasR-EBD) in complex with glucosamine-6-phosphate
Descriptor: 1,2-ETHANEDIOL, 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, 2-amino-2-deoxy-6-O-phosphono-beta-D-glucopyranose, ...
Authors:Fillenberg, S.B, Koerner, S, Muller, Y.A.
Deposit date:2015-05-13
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.652 Å)
Cite:Crystal Structures of the Global Regulator DasR from Streptomyces coelicolor: Implications for the Allosteric Regulation of GntR/HutC Repressors.
Plos One, 11, 2016
4ZSB
DownloadVisualize
BU of 4zsb by Molmil
Crystal structure of the ligand-free effector-binding domain of DasR (DasR-EBD)
Descriptor: HTH-type transcriptional repressor DasR
Authors:Fillenberg, S.B, Grau, F.C, Muller, Y.A.
Deposit date:2015-05-13
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Crystal Structures of the Global Regulator DasR from Streptomyces coelicolor: Implications for the Allosteric Regulation of GntR/HutC Repressors.
Plos One, 11, 2016
4ZS8
DownloadVisualize
BU of 4zs8 by Molmil
Crystal structure of ligand-free, full length DasR
Descriptor: 1,2-ETHANEDIOL, HTH-type transcriptional repressor DasR
Authors:Fillenberg, S.B, Muller, Y.A.
Deposit date:2015-05-13
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of the Global Regulator DasR from Streptomyces coelicolor: Implications for the Allosteric Regulation of GntR/HutC Repressors.
Plos One, 11, 2016
4ZSK
DownloadVisualize
BU of 4zsk by Molmil
Crystal structure of the effector-binding domain of DasR (DasR-EBD) in complex with N-acetylglucosamine-6-phosphate
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, 2-acetamido-2-deoxy-6-O-phosphono-beta-D-glucopyranose, ...
Authors:Fillenberg, S.B, Muller, Y.A.
Deposit date:2015-05-13
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structures of the Global Regulator DasR from Streptomyces coelicolor: Implications for the Allosteric Regulation of GntR/HutC Repressors.
Plos One, 11, 2016

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon