Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4K1F
DownloadVisualize
BU of 4k1f by Molmil
Crystal structure of reduced tryparedoxin peroxidase from leishmania major at 2.34 A resolution
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Ilari, A, Fiorillo, A, Di Chiaro, F.
Deposit date:2013-04-05
Release date:2014-04-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structure-based discovery of the first non-covalent inhibitors of Leishmania major tryparedoxin peroxidase by high throughput docking
Sci Rep, 5, 2015
1UX8
DownloadVisualize
BU of 1ux8 by Molmil
X-ray structure of truncated oxygen-avid haemoglobin from Bacillus subtilis
Descriptor: CHLORIDE ION, CYANIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Ilari, A, Giangiacomo, L, Boffi, A, Chiancone, E.
Deposit date:2004-02-20
Release date:2004-12-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Truncated Oxygen-Avid Hemoglobin from Bacillus Subtilis: X-Ray Structure and Ligand Binding Properties
J.Biol.Chem., 280, 2005
2YAU
DownloadVisualize
BU of 2yau by Molmil
X-ray structure of the Leishmania infantum tryopanothione reductase in complex with auranofin
Descriptor: 2,3,4,6-tetra-O-acetyl-1-thio-beta-D-glucopyranose, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Baiocco, P, Ilari, A, Colotti, G.
Deposit date:2011-02-24
Release date:2012-01-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:A Gold-Containing Drug Against Parasitic Polyamine Metabolism: The X-Ray Structure of Trypanothione Reductase from Leishmania Infantum in Complex with Auranofin Reveals a Dual Mechanism of Enzyme Inhibition.
Amino Acids, 42, 2012
2XQV
DownloadVisualize
BU of 2xqv by Molmil
The X-ray structure of the Zn(II) bound ZnuA from Salmonella enterica
Descriptor: SULFATE ION, ZINC ABC TRANSPORTER, PERIPLASMIC ZINC-BINDING PROTEIN, ...
Authors:Alaleona, F, Ilari, A, Chiancone, E, Battistoni, A, Petrarca, P.
Deposit date:2010-09-07
Release date:2011-04-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:The X-Ray Structure of the Zinc Transporter Znua from Salmonella Enterica Discloses a Unique Triad of Zinc Coordinating Histidines.
J.Mol.Biol., 409, 2011
2XH8
DownloadVisualize
BU of 2xh8 by Molmil
X-ray structure of 119-141 ZnuA deletion mutant from Salmonella enterica.
Descriptor: SODIUM ION, SULFATE ION, ZINC ABC TRANSPORTER, ...
Authors:Alaleona, F, Ilari, A, Battistoni, A, Petrarca, P, Chiancone, E.
Deposit date:2010-06-09
Release date:2011-04-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:The X-Ray Structure of the Zinc Transporter Znua from Salmonella Enterica Discloses a Unique Triad of Zinc Coordinating Histidines.
J.Mol.Biol., 409, 2011
2XY4
DownloadVisualize
BU of 2xy4 by Molmil
X-RAY STRUCTURE OF ZNUA-WT FROM SALMONELLA ENTERICA
Descriptor: SULFATE ION, TRIETHYLENE GLYCOL, ZINC ABC TRANSPORTER, ...
Authors:Alaleona, F, Ilari, A, Battistoni, A, Petrarca, P, Chiancone, E.
Deposit date:2010-11-15
Release date:2011-04-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:The X-Ray Structure of the Zinc Transporter Znua from Salmonella Enterica Discloses a Unique Triad of Zinc Coordinating Histidines.
J.Mol.Biol., 409, 2011
2BMM
DownloadVisualize
BU of 2bmm by Molmil
X-ray structure of a novel thermostable hemoglobin from the actinobacterium Thermobifida fusca
Descriptor: ACETATE ION, PROTOPORPHYRIN IX CONTAINING FE, THERMOSTABLE HEMOGLOBIN FROM THERMOBIFIDA FUSCA
Authors:Ilari, A, Franceschini, S, Bonamore, A, Boffi, A.
Deposit date:2005-03-15
Release date:2005-07-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:A Novel Thermostable Hemoglobin from the Actinobacterium Thermobifida Fusca.
FEBS J., 272, 2005
1UVH
DownloadVisualize
BU of 1uvh by Molmil
X-ray structure of Dps from Mycobacterium smegmatis
Descriptor: FE (III) ION, STARVATION-INDUCED DNA PROTECTING PROTEIN
Authors:Ilari, A, Ceci, P, Falvo, E, Chiancone, E.
Deposit date:2004-01-20
Release date:2005-02-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Reassessment of Protein Stability, DNA Binding, and Protection of Mycobacterium Smegmatis Dps.
J.Biol.Chem., 280, 2005
2IY4
DownloadVisualize
BU of 2iy4 by Molmil
X-ray structure of Dps from Listeria monocytogenes
Descriptor: FE (III) ION, NON-HEME IRON-CONTAINING FERRITIN
Authors:Ilari, A, Bellapadrona, G, Stefanini, S, Chiancone, E.
Deposit date:2006-07-12
Release date:2007-01-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:The Mutations Lys 114 --> Gln and Asp 126 --> Asn Disrupt an Intersubunit Salt Bridge and Convert Listeria Innocua Dps Into its Natural Mutant Listeria Monocytogenes Dps. Effects on Protein Stability at Low Ph.
Proteins, 66, 2007
2X17
DownloadVisualize
BU of 2x17 by Molmil
The X-ray structure of Ferritin from Pyrococcus furiosus loaded with Ag(I)
Descriptor: PUTATIVE FERRITIN HOMOLOG, SILVER ION
Authors:Ilari, A, Fiorillo, A, Ceci, P.
Deposit date:2009-12-22
Release date:2010-04-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Silver Ion Incorporation and Nanoparticle Formation Inside the Cavity of Pyrococcus Furiosus Ferritin: Structural and Size-Distribution Analyses.
J.Am.Chem.Soc., 132, 2010
4BBP
DownloadVisualize
BU of 4bbp by Molmil
X-ray structure of zinc bound ZnuA in complex with RDS51
Descriptor: 1-[(2-chlorophenyl)methyl]-N-hydroxy-4-phenyl-1H-pyrrole-3-carboxamide, SULFATE ION, ZINC ABC TRANSPORTER, ...
Authors:Alaleona, F, Ilari, A, Di Santo, R, Battistoni, A, Chiancone, E.
Deposit date:2012-09-27
Release date:2013-10-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Salmonella Enterica Serovar Typhimurium Growth is Inhibited by the Concomitant Binding of Zn(II) and a Pyrrolyl-Hydroxamate to Znua, the Soluble Component of the Znuabc Transporter.
Biochim.Biophys.Acta, 1860, 2016
4AW8
DownloadVisualize
BU of 4aw8 by Molmil
X-ray structure of ZinT from Salmonella enterica in complex with zinc ion and PEG
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Metal-binding protein ZinT, SODIUM ION, ...
Authors:Alaleona, F, Ilari, A, Battistoni, A, Petrarca, P, Chiancone, E.
Deposit date:2012-06-01
Release date:2013-06-19
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Salmonella Enterica Zint Structure, Zinc Affinity and Interaction with the High-Affinity Uptake Protein Znua Provide Insight Into the Management of Periplasmic Zinc.
Biochim.Biophys.Acta, 1840, 2014
4AYH
DownloadVisualize
BU of 4ayh by Molmil
The X-ray structure of zinc bound ZinT
Descriptor: METAL-BINDING PROTEIN YODA, SULFATE ION, ZINC ION
Authors:Alaleona, F, Ilari, A, Battistoni, A, Petrarca, P, Chiancone, E.
Deposit date:2012-06-21
Release date:2013-07-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:The Salmonella Enterica Zint Structure, Zinc Affinity and Interaction with the High-Affinity Uptake Protein Znua Provide Insight Into the Management of Periplasmic Zinc.
Biochim.Biophys.Acta, 1840, 2014
4ARH
DownloadVisualize
BU of 4arh by Molmil
X ray structure of the periplasmic zinc binding protein ZinT from Salmonella enterica
Descriptor: METAL-BINDING PROTEIN YODA, SULFATE ION
Authors:Alaleona, F, Ilari, A, Battistoni, A, Petrarca, P, Chiancone, E.
Deposit date:2012-04-24
Release date:2013-05-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Salmonella Enterica Zint Structure, Zinc Affinity and Interaction with the High-Affinity Uptake Protein Znua Provide Insight Into the Management of Periplasmic Zinc.
Biochim.Biophys.Acta, 1840, 2014
2C41
DownloadVisualize
BU of 2c41 by Molmil
X-ray structure of Dps from Thermosynechococcus elongatus
Descriptor: CHLORIDE ION, DPS FAMILY DNA-BINDING STRESS RESPONSE PROTEIN, TETRAETHYLENE GLYCOL, ...
Authors:Ilari, A, Franceschini, S, Ceci, P, Chiancone, E.
Deposit date:2005-10-14
Release date:2006-10-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Antioxidant Dps Protein from the Thermophilic Cyanobacterium Thermosynechococcus Elongatus.
FEBS J., 273, 2006
4F7R
DownloadVisualize
BU of 4f7r by Molmil
Crystal structure of 14-3-3 protein from Giardia intestinalis
Descriptor: 14-3-3 protein, SULFATE ION
Authors:Fiorillo, A, Ilari, A, Lalle, M.
Deposit date:2012-05-16
Release date:2013-05-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The Crystal Structure of Giardia duodenalis 14-3-3 in the Apo Form: When Protein Post-Translational Modifications Make the Difference.
Plos One, 9, 2014
3TUE
DownloadVisualize
BU of 3tue by Molmil
The structure of tryparedoxin peroxidase I from Leishmania major
Descriptor: Tryparedoxin peroxidase
Authors:Fiorillo, A, Ilari, A, Colotti, G.
Deposit date:2011-09-16
Release date:2012-09-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structures of the tryparedoxin-tryparedoxin peroxidase couple unveil the structural determinants of leishmania detoxification pathway.
Plos Negl Trop Dis, 6, 2012
7BGO
DownloadVisualize
BU of 7bgo by Molmil
The crystal structure of gene product PA4063 from Pseudomonas aeruginosa in complex with Zn (space group P65)
Descriptor: DUF2796 domain-containing protein, ZINC ION
Authors:Fiorillo, A, Ilari, A.
Deposit date:2021-01-08
Release date:2021-11-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.301 Å)
Cite:Structure and metal-binding properties of PA4063, a novel player in periplasmic zinc trafficking by Pseudomonas aeruginosa.
Acta Crystallogr D Struct Biol, 77, 2021
3KU9
DownloadVisualize
BU of 3ku9 by Molmil
X-ray structure of the mutant lys300met of polyamine oxidase from zea mays in complex with spermine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Fiorillo, A, Ilari, A, Tavladoraki, P.
Deposit date:2009-11-27
Release date:2010-12-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The crystal structure of the mutant K300M of polyamine oxidase from ZEA MAYS unveils the role of LYS300 in catalysis
To be Published
3L1R
DownloadVisualize
BU of 3l1r by Molmil
X-ray structure of the mutant lys300met of polyamine oxidase from zea mays in complex with spermidine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Fiorillo, A, Ilari, A, Tavladoraki, P.
Deposit date:2009-12-14
Release date:2010-12-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The crystal structure of the mutant k300m of polyamine oxidase from zea mays unveils the role of lys300 in catalysis
To be Published
6TMM
DownloadVisualize
BU of 6tmm by Molmil
BIL2 domain from T.thermophila BUBL1 locus (C1A-N143A)
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ...
Authors:Chiarini, V, Ilari, A.
Deposit date:2019-12-04
Release date:2020-12-16
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.398 Å)
Cite:Structural basis of ubiquitination mediated by protein splicing in early Eukarya.
Biochim Biophys Acta Gen Subj, 1865, 2021
4UQV
DownloadVisualize
BU of 4uqv by Molmil
methanococcus jannaschii serine hydroxymethyl-transferase in complex with PLP
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SERINE HYDROXYMETHYLTRANSFERASE
Authors:Saccoccia, F, Angelucci, F, Ilari, A.
Deposit date:2014-06-25
Release date:2014-07-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Crystal Structure of Archaeal Serine Hydroxymethyltransferase Reveals Idiosyncratic Features Likely Required to Withstand High Temperatures.
Proteins, 82, 2014
4ZQ0
DownloadVisualize
BU of 4zq0 by Molmil
crystal structure of Giardia 14-3-3 in complex with the phosphopeptide A8Ap
Descriptor: 14-3-3 protein, A8Ap phosphopeptide, PHOSPHATE ION
Authors:Fiorillo, A, Ilari, A.
Deposit date:2015-05-08
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Molecular Dynamics Simulations and Structural Analysis of Giardia duodenalis 14-3-3 Protein-Protein Interactions.
J.Chem.Inf.Model., 55, 2015
8QYT
DownloadVisualize
BU of 8qyt by Molmil
Human Pyridoxine-5'-phosphate oxidase in complex with PLP
Descriptor: BETA-MERCAPTOETHANOL, FLAVIN MONONUCLEOTIDE, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Antonelli, L, Ilari, A, Fiorillo, A.
Deposit date:2023-10-26
Release date:2024-02-07
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Identification of the pyridoxal 5'-phosphate allosteric site in human pyridox(am)ine 5'-phosphate oxidase.
Protein Sci., 33, 2024
8QYW
DownloadVisualize
BU of 8qyw by Molmil
Human Pyridoxine-5'-phosphate oxidase mutant R225H
Descriptor: FLAVIN MONONUCLEOTIDE, PHOSPHATE ION, Pyridoxine-5'-phosphate oxidase
Authors:Antonelli, L, Ilari, A, Fiorillo, A.
Deposit date:2023-10-26
Release date:2024-02-07
Method:X-RAY DIFFRACTION (2.746 Å)
Cite:Identification of the pyridoxal 5'-phosphate allosteric site in human pyridox(am)ine 5'-phosphate oxidase.
Protein Sci., 33, 2024

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon