Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3HK8
DownloadVisualize
BU of 3hk8 by Molmil
Crystal structure of uronate isomerase from Bacillus halodurans complexed with zinc and D-Arabinohydroxamate
Descriptor: CARBONATE ION, CHLORIDE ION, D-arabinohydroxamic acid, ...
Authors:Fedorov, A.A, Fedorov, E.V, Nguyen, T.T, Raushel, F.M, Almo, S.C.
Deposit date:2009-05-22
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The mechanism of the reaction catalyzed by uronate isomerase illustrates how an isomerase may have evolved from a hydrolase within the amidohydrolase superfamily.
Biochemistry, 48, 2009
3HKA
DownloadVisualize
BU of 3hka by Molmil
Crystal structure of uronate isomerase from Bacillus halodurans complexed with zinc and D-Fructuronate
Descriptor: CARBONATE ION, CHLORIDE ION, D-fructuronic acid, ...
Authors:Fedorov, A.A, Fedorov, E.V, Nguyen, T.T, Raushel, F.M, Almo, S.C.
Deposit date:2009-05-22
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The mechanism of the reaction catalyzed by uronate isomerase illustrates how an isomerase may have evolved from a hydrolase within the amidohydrolase superfamily.
Biochemistry, 48, 2009
3HUH
DownloadVisualize
BU of 3huh by Molmil
The structure of biphenyl-2,3-diol 1,2-dioxygenase iii-related protein from salmonella typhimurium
Descriptor: Virulence protein STM3117
Authors:Fedorov, A.A, Fedorov, E.V, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-06-14
Release date:2009-06-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The structure of biphenyl-2,3-diol 1,2-dioxygenase iii-related protein from salmonella typhimurium
To be Published
3HK9
DownloadVisualize
BU of 3hk9 by Molmil
Crystal structure of uronate isomerase from Bacillus halodurans complexed with zinc and D-Glucuronate
Descriptor: CARBONATE ION, CHLORIDE ION, D-glucuronic acid, ...
Authors:Fedorov, A.A, Fedorov, E.V, Nguyen, T.T, Raushel, F.M, Almo, S.C.
Deposit date:2009-05-22
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The mechanism of the reaction catalyzed by uronate isomerase illustrates how an isomerase may have evolved from a hydrolase within the amidohydrolase superfamily.
Biochemistry, 48, 2009
3HK7
DownloadVisualize
BU of 3hk7 by Molmil
Crystal structure of uronate isomerase from Bacillus halodurans complexed with zinc and D-Arabinarate, monoclinic crystal form
Descriptor: CARBONATE ION, CHLORIDE ION, D-arabinaric acid, ...
Authors:Fedorov, A.A, Fedorov, E.V, Nguyen, T.T, Raushel, F.M, Almo, S.C.
Deposit date:2009-05-22
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The mechanism of the reaction catalyzed by uronate isomerase illustrates how an isomerase may have evolved from a hydrolase within the amidohydrolase superfamily.
Biochemistry, 48, 2009
3NXL
DownloadVisualize
BU of 3nxl by Molmil
Crystal structure of Glucarate dehydratase from Burkholderia cepacia complexed with magnesium
Descriptor: CARBONATE ION, Glucarate dehydratase, MAGNESIUM ION
Authors:Fedorov, A.A, Fedorov, E.V, Gerlt, J.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-07-14
Release date:2010-07-28
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.885 Å)
Cite:Crystal structure of Glucarate dehydratase from Burkholderia cepacia complexed with magnesium
To be Published
3HPF
DownloadVisualize
BU of 3hpf by Molmil
Crystal structure of the mutant Y90F of divergent galactarate dehydratase from Oceanobacillus iheyensis complexed with Mg and galactarate
Descriptor: D-galactaric acid, MAGNESIUM ION, Muconate cycloisomerase
Authors:Fedorov, A.A, Fedorov, E.V, Rakus, J.F, Gerlt, J.A, Almo, S.C.
Deposit date:2009-06-04
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Computation-facilitated assignment of the function in the enolase superfamily: a regiochemically distinct galactarate dehydratase from Oceanobacillus iheyensis .
Biochemistry, 48, 2009
3I4K
DownloadVisualize
BU of 3i4k by Molmil
Crystal structure of Muconate lactonizing enzyme from Corynebacterium glutamicum
Descriptor: ACETIC ACID, MAGNESIUM ION, Muconate lactonizing enzyme
Authors:Fedorov, A.A, Fedorov, E.V, Sauder, J.M, Burley, S.K, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-01
Release date:2009-07-14
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Muconate lactonizing enzyme from Corynebacterium glutamicum
To be Published
3HPA
DownloadVisualize
BU of 3hpa by Molmil
Crystal structure of an amidohydrolase gi:44264246 from an evironmental sample of sargasso sea
Descriptor: AMIDOHYDROLASE, ZINC ION
Authors:Fedorov, A.A, Fedorov, E.V, Toro, R, Raushel, F.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-06-03
Release date:2009-06-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The hunt for 8-oxoguanine deaminase.
J.Am.Chem.Soc., 132, 2010
3I4J
DownloadVisualize
BU of 3i4j by Molmil
Crystal structure of Aminotransferase, class III from Deinococcus radiodurans
Descriptor: Aminotransferase, class III, SULFATE ION
Authors:Fedorov, A.A, Fedorov, E.V, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-01
Release date:2009-07-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Aminotransferase, class III from Deinococcus radiodurans
To be Published
3NQ7
DownloadVisualize
BU of 3nq7 by Molmil
Crystal structure of the mutant F71A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2010-06-29
Release date:2011-05-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.443 Å)
Cite:Crystal structure of the mutant F71A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP
To be Published
3O7U
DownloadVisualize
BU of 3o7u by Molmil
Crystal structure of Cytosine Deaminase from Escherichia Coli complexed with zinc and phosphono-cytosine
Descriptor: (2R)-2-amino-2,5-dihydro-1,5,2-diazaphosphinin-6(1H)-one 2-oxide, (2S)-1-[3-{[(2R)-2-hydroxypropyl]oxy}-2,2-bis({[(2R)-2-hydroxypropyl]oxy}methyl)propoxy]propan-2-ol, Cytosine deaminase, ...
Authors:Fedorov, A.A, Fedorov, E.V, Hall, R.S, Raushel, F.M, Almo, S.C.
Deposit date:2010-07-31
Release date:2011-06-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.708 Å)
Cite:Three-dimensional structure and catalytic mechanism of Cytosine deaminase.
Biochemistry, 50, 2011
3P93
DownloadVisualize
BU of 3p93 by Molmil
Crystal structure of D-mannonate dehydratase from Chromohalobacter Salexigens complexed with MG,D-Mannonate and 2-keto-3-deoxy-D-Gluconate
Descriptor: 2-KETO-3-DEOXYGLUCONATE, D-MANNONIC ACID, MAGNESIUM ION, ...
Authors:Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C.
Deposit date:2010-10-15
Release date:2011-10-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:CRYSTAL STRUCTURE OF D-MANNONATE DEHYDRATASE FROM CHROMOHALOBACTER SALEXIGENS complexed with MG,D-Mannonate and 2-keto-3-deoxy-D-Gluconate
To be Published
3P3B
DownloadVisualize
BU of 3p3b by Molmil
CRYSTAL STRUCTURE OF Galacturonate DEHYDRATASE FROM GEOBACILLUS SP. COMPLEXED WITH D-TARTRATE
Descriptor: D(-)-TARTARIC ACID, MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein
Authors:Fedorov, A.A, Fedorov, E.V, Groninger-Poe, F, Gerlt, J.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-10-04
Release date:2011-06-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:CRYSTAL STRUCTURE OF Galacturonate DEHYDRATASE FROM GEOBACILLUS SP. COMPLEXED WITH D-TARTRATE.
To be Published
3P61
DownloadVisualize
BU of 3p61 by Molmil
Crystal structure of the mutant R160A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-monophosphate decarboxylase
Authors:Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2010-10-11
Release date:2011-09-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.396 Å)
Cite:Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme.
Biochemistry, 51, 2012
3P5Z
DownloadVisualize
BU of 3p5z by Molmil
Crystal structure of the mutant T159S of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, N-PROPANOL, ...
Authors:Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2010-10-11
Release date:2011-09-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme.
Biochemistry, 51, 2012
3P60
DownloadVisualize
BU of 3p60 by Molmil
Crystal structure of the mutant T159V of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-monophosphate decarboxylase
Authors:Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2010-10-11
Release date:2011-09-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme.
Biochemistry, 51, 2012
3P5Y
DownloadVisualize
BU of 3p5y by Molmil
Crystal structure of the mutant T159A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2010-10-11
Release date:2011-09-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme.
Biochemistry, 51, 2012
3OW1
DownloadVisualize
BU of 3ow1 by Molmil
Crystal structure of D-mannonate dehydratase from Chromohalobacter salexigens complexed with MG
Descriptor: GLYCEROL, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme, ...
Authors:Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C.
Deposit date:2010-09-17
Release date:2011-09-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:CRYSTAL STRUCTURE OF D-MANNONATE DEHYDRATASE FROM CHROMOHALOBACTER SALEXIGENS complexed with MG
To be Published
3P0W
DownloadVisualize
BU of 3p0w by Molmil
Crystal structure of D-Glucarate dehydratase from Ralstonia solanacearum complexed with Mg and D-glucarate
Descriptor: D-GLUCARATE, MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein
Authors:Fedorov, A.A, Fedorov, E.V, Gerlt, J.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-09-29
Release date:2010-10-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Crystal structure of D-Glucarate dehydratase from Ralstonia solanacearum complexed with Mg and D-glucarate
To be Published
3OZY
DownloadVisualize
BU of 3ozy by Molmil
Crystal structure of enolase superfamily member from Bordetella bronchiseptica complexed with Mg and m-Xylarate
Descriptor: ACETIC ACID, D-xylaric acid, GLYCEROL, ...
Authors:Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C.
Deposit date:2010-09-27
Release date:2011-09-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.2994 Å)
Cite:Crystal structure of enolase superfamily member from Bordetella bronchiseptica complexed with Mg and m-Xylarate
To be Published
3OZM
DownloadVisualize
BU of 3ozm by Molmil
Crystal structure of enolase superfamily member from Bordetella bronchiseptica complexed with Mg, m-Xylarate and L-Lyxarate
Descriptor: D-xylaric acid, GLYCEROL, L-arabinaric acid, ...
Authors:Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C.
Deposit date:2010-09-25
Release date:2011-09-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of enolase superfamily member from Bordetella bronchiseptica complexed with Mg, m-Xylarate and L-Lyxarate
TO BE PUBLISHED
3PDW
DownloadVisualize
BU of 3pdw by Molmil
Crystal structure of putative p-nitrophenyl phosphatase from Bacillus subtilis
Descriptor: ACETIC ACID, GLYCEROL, Uncharacterized hydrolase yutF
Authors:Fedorov, A.A, Fedorov, E.V, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-10-25
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.596 Å)
Cite:Crystal structure of putative p-nitrophenyl phosphatase from Bacillus subtilis
To be Published
3PFR
DownloadVisualize
BU of 3pfr by Molmil
Crystal structure of D-Glucarate dehydratase related protein from Actinobacillus Succinogenes complexed with D-Glucarate
Descriptor: D-GLUCARATE, MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein
Authors:Fedorov, A.A, Fedorov, E.V, Mills-Groninger, F, Ghasempur, S, Gerlt, J.A, Almo, S.C.
Deposit date:2010-10-29
Release date:2011-11-02
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Crystal structure of D-Glucarate dehydratase related protein from Actinobacillus Succinogenes complexed with D-Glucarate
To be Published
3PWG
DownloadVisualize
BU of 3pwg by Molmil
Crystal structure of the mutant S29G.P34A of D-Glucarate dehydratase from Escherichia coli complexed with product 5-keto-4-deoxy-D-Glucarate
Descriptor: 2,3-DIHYDROXY-5-OXO-HEXANEDIOATE, GLYCEROL, Glucarate dehydratase, ...
Authors:Fedorov, A.A, Fedorov, E.V, Lukk, T, Gerlt, J.A, Almo, S.C.
Deposit date:2010-12-08
Release date:2011-12-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the mutant S29G.P34A of D-Glucarate dehydratase from Escherichia Coli complexed with product 5-keto-4-deoxy-D-Glucarate
To be Published

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon