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8Q3R
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BU of 8q3r by Molmil
Cryo-EM structure of the DNA polymerase holoenzyme E9-A20-D4 of vaccinia virus
Descriptor: DNA polymerase, DNA polymerase processivity factor component OPG148, Uracil-DNA glycosylase
Authors:Burmeister, W.P, Ballandras-Colas, A, Boettcher, B, Grimm, C.
Deposit date:2023-08-04
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and flexibility of the DNA polymerase holoenzyme of vaccinia virus
To Be Published
2PWR
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BU of 2pwr by Molmil
HIV-1 protease in complex with a carbamoyl decorated pyrrolidine-based inhibitor
Descriptor: 4,4'-{(3S,4S)-PYRROLIDINE-3,4-DIYLBIS[(BENZYLIMINO)SULFONYL]}DIBENZAMIDE, CHLORIDE ION, GLYCEROL, ...
Authors:Boettcher, B, Blum, A, Heine, A, Diederich, W.E, Klebe, G.
Deposit date:2007-05-12
Release date:2008-04-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-Guided Design of C2-Symmetric HIV-1 Protease Inhibitors Based on a Pyrrolidine Scaffold.
J.Med.Chem., 51, 2008
4ADU
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BU of 4adu by Molmil
Crystal structure of plasmodial PLP synthase with bound R5P intermediate
Descriptor: 1,2-ETHANEDIOL, PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE, PUTATIVE, ...
Authors:Guedez, G, Sinning, I, Tews, I.
Deposit date:2012-01-03
Release date:2012-01-25
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Assembly of the Eukaryotic Plp-Synthase Complex from Plasmodium and Activation of the Pdx1 Enzyme.
Structure, 20, 2012
4ADS
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BU of 4ads by Molmil
Crystal structure of plasmodial PLP synthase complex
Descriptor: PDX2 PROTEIN, PHOSPHATE ION, PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE, ...
Authors:Guedez, G, Sinning, I, Tews, I.
Deposit date:2012-01-03
Release date:2012-01-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.61 Å)
Cite:Assembly of the Eukaryotic Plp-Synthase Complex from Plasmodium and Activation of the Pdx1 Enzyme.
Structure, 20, 2012
4ADT
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BU of 4adt by Molmil
Crystal structure of plasmodial PLP synthase
Descriptor: PHOSPHATE ION, PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE, PUTATIVE
Authors:Guedez, G, Sinning, I, Tews, I.
Deposit date:2012-01-03
Release date:2012-01-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Assembly of the Eukaryotic Plp-Synthase Complex from Plasmodium and Activation of the Pdx1 Enzyme.
Structure, 20, 2012
3J2I
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BU of 3j2i by Molmil
Structure of late pre-60S ribosomal subunits with nuclear export factor Arx1 bound at the peptide exit tunnel
Descriptor: Eukaryotic translation initiation factor 6, Proliferation-associated protein 2G4
Authors:Bradatsch, B, Leidig, C, Granneman, S, Gnaedig, M, Tollervey, D, Boettcher, B, Beckmann, R, Hurt, E.
Deposit date:2012-10-04
Release date:2012-11-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (11.9 Å)
Cite:Structure of the pre-60S ribosomal subunit with nuclear export factor Arx1 bound at the exit tunnel.
Nat.Struct.Mol.Biol., 19, 2012
6RFL
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BU of 6rfl by Molmil
Structure of the complete Vaccinia DNA-dependent RNA polymerase complex
Descriptor: DNA-dependent RNA polymerase subunit rpo132, DNA-dependent RNA polymerase subunit rpo147, DNA-dependent RNA polymerase subunit rpo18, ...
Authors:Grimm, C, Hillen, S.H, Bedenk, K, Bartuli, J, Neyer, S, Zhang, Q, Huettenhofer, A, Erlacher, M, Dienemann, C, Schlosser, A, Urlaub, H, Boettcher, B, Szalay, A.A, Cramer, P, Fischer, U.
Deposit date:2019-04-15
Release date:2019-12-11
Last modified:2019-12-25
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structural Basis of Poxvirus Transcription: Vaccinia RNA Polymerase Complexes.
Cell, 179, 2019
6RX4
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BU of 6rx4 by Molmil
THE STRUCTURE OF BD OXIDASE FROM ESCHERICHIA COLI
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, Cytochrome bd-I ubiquinol oxidase subunit 1, ...
Authors:Rasmussen, T, Boettcher, B, Thesseling, A, Friedrich, T.
Deposit date:2019-06-07
Release date:2019-11-20
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Homologous bd oxidases share the same architecture but differ in mechanism.
Nat Commun, 10, 2019
6RLD
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BU of 6rld by Molmil
STRUCTURE OF THE MECHANOSENSITIVE CHANNEL MSCS EMBEDDED IN THE MEMBRANE BILAYER
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Small-conductance mechanosensitive channel
Authors:Rasmussen, T, Flegler, V.J, Rasmussen, A, Boettcher, B.
Deposit date:2019-05-02
Release date:2019-07-24
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure of the Mechanosensitive Channel MscS Embedded in the Membrane Bilayer.
J.Mol.Biol., 431, 2019
8C8H
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BU of 8c8h by Molmil
Cryo EM structure of the vaccinia complete RNA polymerase complex lacking the capping enzyme
Descriptor: Core protein E11, DNA-directed RNA polymerase 133 kDa polypeptide, DNA-directed RNA polymerase 147 kDa polypeptide, ...
Authors:Grimm, G, Bartuli, J, Fischer, U.
Deposit date:2023-01-20
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Cryo EM structure of the vaccinia complete RNA polymerase complex lacking the capping enzyme
To Be Published
7OO6
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BU of 7oo6 by Molmil
Mechanosensitive channel MscS solubilized with DDM in closed conformation with added lipid
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, DODECYL-BETA-D-MALTOSIDE, Mechanosensitive channel of small conductance (MscS)
Authors:Rasmussen, T, Flegler, V.J, Boettcher, B.
Deposit date:2021-05-26
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanosensitive channel gating by delipidation.
Proc.Natl.Acad.Sci.USA, 118, 2021
7OO8
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BU of 7oo8 by Molmil
Mechanosensitive channel MscS solubilized with LMNG in closed conformation with added lipid
Descriptor: Mechanosensitive channel of small conductance (MscS)
Authors:Rasmussen, T, Flegler, V.J, Boettcher, B.
Deposit date:2021-05-26
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Mechanosensitive channel gating by delipidation.
Proc.Natl.Acad.Sci.USA, 118, 2021
7ONL
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BU of 7onl by Molmil
Mechanosensitive channel MscS solubilized with DDM in closed conformation
Descriptor: Small-conductance mechanosensitive channel
Authors:Rasmussen, T, Flegler, V.J, Boettcher, B.
Deposit date:2021-05-25
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Mechanosensitive channel gating by delipidation.
Proc.Natl.Acad.Sci.USA, 118, 2021
7ONJ
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BU of 7onj by Molmil
Mechanosensitive channel MscS solubilized with LMNG in open conformation
Descriptor: 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, 2-decyl-2-{[(4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosyl)oxy]methyl}dodecyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Rasmussen, T, Flegler, V.J, Boettcher, B.
Deposit date:2021-05-25
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Mechanosensitive channel gating by delipidation.
Proc.Natl.Acad.Sci.USA, 118, 2021
7OO0
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BU of 7oo0 by Molmil
Mechanosensitive channel MscS solubilized with DDM in open conformation
Descriptor: 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, DODECYL-BETA-D-MALTOSIDE, Mechanosensitive channel MscS
Authors:Rasmussen, T, Flegler, V.J, Boettcher, B.
Deposit date:2021-05-26
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanosensitive channel gating by delipidation.
Proc.Natl.Acad.Sci.USA, 118, 2021
7OOA
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BU of 7ooa by Molmil
Mechanosensitive channel MscS solubilized with LMNG in open conformation with added lipid
Descriptor: 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, 2-decyl-2-{[(4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosyl)oxy]methyl}dodecyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Rasmussen, T, Flegler, V.J, Boettcher, B.
Deposit date:2021-05-27
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Mechanosensitive channel gating by delipidation.
Proc.Natl.Acad.Sci.USA, 118, 2021
7OSE
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BU of 7ose by Molmil
cytochrome bd-II type oxidase with bound aurachin D
Descriptor: Aurachin D, CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, Cytochrome bd-II ubiquinol oxidase subunit 1, ...
Authors:Grauel, A, Kaegi, J, Rasmussen, T, Wohlwend, D, Boettcher, B, Friedrich, T.
Deposit date:2021-06-08
Release date:2021-11-17
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of Escherichia coli cytochrome bd-II type oxidase with bound aurachin D.
Nat Commun, 12, 2021
7PZN
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BU of 7pzn by Molmil
wt HBc capsid like particles in complex with inhibitory peptide SLLGRM and Triton X-100
Descriptor: Capsid protein, FRAGMENT OF TRITON X-100, SLLGRM, ...
Authors:Makbul, C, Boettcher, B.
Deposit date:2021-10-12
Release date:2021-12-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Binding of a Pocket Factor to Hepatitis B Virus Capsids Changes the Rotamer Conformation of Phenylalanine 97.
Viruses, 13, 2021
7PZL
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BU of 7pzl by Molmil
HBc-F97L premature secretion phenotype
Descriptor: Capsid protein, FRAGMENT OF TRITON X-100
Authors:Makbul, C, Boettcher, B.
Deposit date:2021-10-12
Release date:2021-12-08
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Binding of a Pocket Factor to Hepatitis B Virus Capsids Changes the Rotamer Conformation of Phenylalanine 97.
Viruses, 13, 2021
7PZ9
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BU of 7pz9 by Molmil
HBc-F97L premature secretion phenotype
Descriptor: Capsid protein
Authors:Makbul, C, Boettcher, B.
Deposit date:2021-10-11
Release date:2021-12-08
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Binding of a Pocket Factor to Hepatitis B Virus Capsids Changes the Rotamer Conformation of Phenylalanine 97.
Viruses, 13, 2021
7PZK
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BU of 7pzk by Molmil
HBc-WT in complex with Triton X-100
Descriptor: Capsid protein, FRAGMENT OF TRITON X-100
Authors:Makbul, C, Boettcher, B.
Deposit date:2021-10-12
Release date:2021-12-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Binding of a Pocket Factor to Hepatitis B Virus Capsids Changes the Rotamer Conformation of Phenylalanine 97.
Viruses, 13, 2021
7PZM
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BU of 7pzm by Molmil
HBc-P5T in complex with X-100
Descriptor: Capsid protein, FRAGMENT OF TRITON X-100
Authors:Makbul, C, Boettcher, B.
Deposit date:2021-10-12
Release date:2021-12-08
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Binding of a Pocket Factor to Hepatitis B Virus Capsids Changes the Rotamer Conformation of Phenylalanine 97.
Viruses, 13, 2021
7PZI
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BU of 7pzi by Molmil
HBc-F97L (premature secretion phenotype) in complex with Triton X-100
Descriptor: Capsid protein, FRAGMENT OF TRITON X-100
Authors:Makbul, C, Boettcher, B.
Deposit date:2021-10-12
Release date:2021-12-08
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Binding of a Pocket Factor to Hepatitis B Virus Capsids Changes the Rotamer Conformation of Phenylalanine 97.
Viruses, 13, 2021
7AMV
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BU of 7amv by Molmil
Atomic structure of the poxvirus transcription pre-initiation complex in the initially melted state
Descriptor: ATP-dependent helicase VETFS, DNA-directed RNA polymerase, DNA-directed RNA polymerase 147 kDa polypeptide, ...
Authors:Grimm, C, Bartuli, J, Fischer, U.
Deposit date:2020-10-09
Release date:2021-10-06
Last modified:2021-10-20
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of the complete poxvirus transcription initiation process.
Nat.Struct.Mol.Biol., 28, 2021
7AOF
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BU of 7aof by Molmil
Atomic structure of the poxvirus transcription late pre-initiation complex
Descriptor: DNA-directed RNA polymerase, DNA-directed RNA polymerase 147 kDa polypeptide, DNA-directed RNA polymerase 18 kDa subunit, ...
Authors:Grimm, C, Bartuli, J, Fischer, U.
Deposit date:2020-10-14
Release date:2021-10-06
Last modified:2021-10-20
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structural basis of the complete poxvirus transcription initiation process.
Nat.Struct.Mol.Biol., 28, 2021

 

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