Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1IN4
DownloadVisualize
BU of 1in4 by Molmil
THERMOTOGA MARITIMA RUVB HOLLIDAY JUNCTION BRANCH MIGRATION MOTOR
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, COBALT (II) ION, ...
Authors:Putnam, C.D, Tainer, J.A.
Deposit date:2001-05-12
Release date:2001-08-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and mechanism of the RuvB Holliday junction branch migration motor.
J.Mol.Biol., 311, 2001
1JWK
DownloadVisualize
BU of 1jwk by Molmil
Murine Inducible Nitric Oxide Synthase Oxygenase Dimer (Delta 65) with W457A Mutation at Tetrahydrobiopterin Binding Site
Descriptor: 1,2-ETHANEDIOL, 7,8-DIHYDROBIOPTERIN, GLYCEROL, ...
Authors:Aoyagi, M, Arvai, A.S, Ghosh, S, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2001-09-04
Release date:2001-10-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of tetrahydrobiopterin binding-site mutants of inducible nitric oxide synthase oxygenase dimer and implicated roles of Trp457.
Biochemistry, 40, 2001
1IN8
DownloadVisualize
BU of 1in8 by Molmil
THERMOTOGA MARITIMA RUVB T158V
Descriptor: ADENOSINE-5'-DIPHOSPHATE, HOLLIDAY JUNCTION DNA HELICASE RUVB
Authors:Putnam, C.D, Clancy, S.B, Tsuruta, H, Wetmur, J.G, Tainer, J.A.
Deposit date:2001-05-12
Release date:2001-08-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of the RuvB Holliday junction branch migration motor.
J.Mol.Biol., 311, 2001
1KEA
DownloadVisualize
BU of 1kea by Molmil
STRUCTURE OF A THERMOSTABLE THYMINE-DNA GLYCOSYLASE
Descriptor: ACETATE ION, CHLORIDE ION, IRON/SULFUR CLUSTER, ...
Authors:Mol, C.D, Arvai, A.S, Begley, T.J, Cunningham, R.P, Tainer, J.A.
Deposit date:2001-11-14
Release date:2002-01-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and activity of a thermostable thymine-DNA glycosylase: evidence for base twisting to remove mismatched normal DNA bases.
J.Mol.Biol., 315, 2002
1JA8
DownloadVisualize
BU of 1ja8 by Molmil
Kinetic Analysis of Product Inhibition in Human Manganese Superoxide Dismutase
Descriptor: MANGANESE (II) ION, Manganese Superoxide Dismutase, SULFATE ION
Authors:Hearn, A.S, Stroupe, M.E, Cabelli, D.E, Lepock, J.R, Tainer, J.A, Nick, H.S, Silverman, D.S.
Deposit date:2001-05-29
Release date:2001-06-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Kinetic analysis of product inhibition in human manganese superoxide dismutase.
Biochemistry, 40, 2001
1KYR
DownloadVisualize
BU of 1kyr by Molmil
Crystal Structure of a Cu-bound Green Fluorescent Protein Zn Biosensor
Descriptor: COPPER (II) ION, Green Fluorescent Protein, MAGNESIUM ION
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-02-05
Release date:2002-04-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural chemistry of a green fluorescent protein Zn biosensor.
J.Am.Chem.Soc., 124, 2002
1IN5
DownloadVisualize
BU of 1in5 by Molmil
THERMOGOTA MARITIMA RUVB A156S MUTANT
Descriptor: ADENOSINE-5'-DIPHOSPHATE, HOLLIDAY JUNCTION DNA HELICASE RUVB
Authors:Putnam, C.D, Clancy, S.B, Tsuruta, H, Gonzalez, S, Wetmur, J.G, Tainer, J.A.
Deposit date:2001-05-12
Release date:2001-08-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanism of the RuvB Holliday junction branch migration motor.
J.Mol.Biol., 311, 2001
1II7
DownloadVisualize
BU of 1ii7 by Molmil
Crystal structure of P. furiosus Mre11 with manganese and dAMP
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, Mre11 nuclease, ...
Authors:Hopfner, K.-P, Karcher, A, Craig, L, Woo, T.T, Carney, J.P, Tainer, J.A.
Deposit date:2001-04-20
Release date:2001-05-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural biochemistry and interaction architecture of the DNA double-strand break repair Mre11 nuclease and Rad50-ATPase.
Cell(Cambridge,Mass.), 105, 2001
1J7K
DownloadVisualize
BU of 1j7k by Molmil
THERMOTOGA MARITIMA RUVB P216G MUTANT
Descriptor: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, COBALT (II) ION, ...
Authors:Putnam, C.D, Clancy, S.B, Tsuruta, H, Wetmur, J.G, Tainer, J.A.
Deposit date:2001-05-16
Release date:2001-08-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and mechanism of the RuvB Holliday junction branch migration motor.
J.Mol.Biol., 311, 2001
1KYS
DownloadVisualize
BU of 1kys by Molmil
Crystal Structure of a Zn-bound Green Fluorescent Protein Biosensor
Descriptor: Green Fluorescent Protein, ZINC ION
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-02-05
Release date:2002-04-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structural chemistry of a green fluorescent protein Zn biosensor.
J.Am.Chem.Soc., 124, 2002
1JWJ
DownloadVisualize
BU of 1jwj by Molmil
Murine Inducible Nitric Oxide Synthase Oxygenase Dimer (Delta 65) with W457F Mutation at Tetrahydrobiopterin Binding Site
Descriptor: 1,2-ETHANEDIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, GLYCEROL, ...
Authors:Aoyagi, M, Arvai, A.S, Ghosh, S, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2001-09-04
Release date:2001-10-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of tetrahydrobiopterin binding-site mutants of inducible nitric oxide synthase oxygenase dimer and implicated roles of Trp457.
Biochemistry, 40, 2001
1L8D
DownloadVisualize
BU of 1l8d by Molmil
Rad50 coiled-coil Zn hook
Descriptor: CITRIC ACID, DNA double-strand break repair rad50 ATPase, MERCURY (II) ION, ...
Authors:Hopfner, K.P, Tainer, J.A.
Deposit date:2002-03-20
Release date:2002-08-28
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Rad50 zinc-hook is a structure joining Mre11 complexes in DNA recombination and repair.
Nature, 418, 2002
1QYF
DownloadVisualize
BU of 1qyf by Molmil
Crystal structure of matured green fluorescent protein R96A variant
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, green-fluorescent protein
Authors:Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2003-09-10
Release date:2003-09-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures.
Proc.Natl.Acad.Sci.Usa, 100, 2003
1QYQ
DownloadVisualize
BU of 1qyq by Molmil
Crystal Structure of the cyclized S65G Y66G GFP variant
Descriptor: green-fluorescent protein
Authors:Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2003-09-11
Release date:2003-09-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures.
Proc.Natl.Acad.Sci.Usa, 100, 2003
1SPD
DownloadVisualize
BU of 1spd by Molmil
AMYOTROPHIC LATERAL SCLEROSIS AND STRUCTURAL DEFECTS IN CU,ZN SUPEROXIDE DISMUTASE
Descriptor: COPPER (II) ION, SUPEROXIDE DISMUTASE, ZINC ION
Authors:Parge, H.E, Tainer, J.A.
Deposit date:1993-07-21
Release date:1994-04-30
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Amyotrophic lateral sclerosis and structural defects in Cu,Zn superoxide dismutase.
Science, 261, 1993
1QNM
DownloadVisualize
BU of 1qnm by Molmil
HUMAN MANGANESE SUPEROXIDE DISMUTASE MUTANT Q143N
Descriptor: MANGANESE (II) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:Guan, Y, Tainer, J.A.
Deposit date:1997-07-03
Release date:1998-01-07
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Probing the active site of human manganese superoxide dismutase: the role of glutamine 143.
Biochemistry, 37, 1998
1QUM
DownloadVisualize
BU of 1qum by Molmil
CRYSTAL STRUCTURE OF ESCHERICHIA COLI ENDONUCLEASE IV IN COMPLEX WITH DAMAGED DNA
Descriptor: 5'-D(*(3DR)P*CP*GP*AP*CP*GP*A)-3', 5'-D(*CP*GP*TP*CP*C)-3', 5'-D(*TP*CP*GP*TP*CP*GP*GP*GP*GP*AP*CP*G)-3', ...
Authors:Hosfield, D.J, Guan, Y, Haas, B.J, Cunningham, R.P, Tainer, J.A.
Deposit date:1999-07-01
Release date:1999-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of the DNA repair enzyme endonuclease IV and its DNA complex: double-nucleotide flipping at abasic sites and three-metal-ion catalysis.
Cell(Cambridge,Mass.), 98, 1999
1QTW
DownloadVisualize
BU of 1qtw by Molmil
HIGH-RESOLUTION CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI DNA REPAIR ENZYME ENDONUCLEASE IV
Descriptor: ENDONUCLEASE IV, ZINC ION
Authors:Hosfield, D.J, Guan, Y, Haas, B.J, Cunningham, R.P, Tainer, J.A.
Deposit date:1999-06-29
Release date:1999-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Structure of the DNA repair enzyme endonuclease IV and its DNA complex: double-nucleotide flipping at abasic sites and three-metal-ion catalysis.
Cell(Cambridge,Mass.), 98, 1999
1QYO
DownloadVisualize
BU of 1qyo by Molmil
Anaerobic precylization intermediate crystal structure for S65G Y66G GFP variant
Descriptor: green-fluorescent protein
Authors:Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2003-09-11
Release date:2003-09-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures.
Proc.Natl.Acad.Sci.Usa, 100, 2003
1QXT
DownloadVisualize
BU of 1qxt by Molmil
Crystal structure of precyclized intermediate for the green fluorescent protein R96A variant (A)
Descriptor: green-fluorescent protein
Authors:Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2003-09-08
Release date:2003-09-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures
Proc.Natl.Acad.Sci.USA, 100
1QY3
DownloadVisualize
BU of 1qy3 by Molmil
Crystal structure of precyclized intermediate for the green fluorescent protein R96A variant (B)
Descriptor: green-fluorescent protein
Authors:Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2003-09-09
Release date:2003-09-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures.
Proc.Natl.Acad.Sci.Usa, 100, 2003
1RXW
DownloadVisualize
BU of 1rxw by Molmil
Crystal structure of A. fulgidus FEN-1 bound to DNA
Descriptor: 5'-d(*C*pG*pA*pT*pG*pC*pT*pA)-3', 5'-d(*T*pA*pG*pC*pA*pT*pC*pG*pG)-3', Flap structure-specific endonuclease
Authors:Chapados, B.R, Hosfield, D.J, Han, S, Qiu, J, Yelent, B, Shen, B, Tainer, J.A.
Deposit date:2003-12-18
Release date:2004-01-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for FEN-1 Substrate Specificity and PCNA-Mediated Activation in DNA Replication and Repair
Cell(Cambridge,Mass.), 116, 2004
1RXZ
DownloadVisualize
BU of 1rxz by Molmil
C-terminal region of A. fulgidus FEN-1 complexed with A. fulgidus PCNA
Descriptor: DNA polymerase sliding clamp, Flap structure-specific endonuclease
Authors:Chapados, B.R, Hosfield, D.J, Han, S, Qiu, J, Yelent, B, Shen, B, Tainer, J.A.
Deposit date:2003-12-18
Release date:2004-01-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for FEN-1 Substrate Specificity and PCNA-Mediated Activation in DNA Replication and Repair
Cell(Cambridge,Mass.), 116, 2004
1SCE
DownloadVisualize
BU of 1sce by Molmil
CRYSTAL STRUCTURE OF THE CELL CYCLE REGULATORY PROTEIN SUC1 REVEALS A NOVEL BETA-HINGE CONFORMATIONAL SWITCH
Descriptor: CHLORIDE ION, SUC1
Authors:Bourne, Y, Tainer, J.A.
Deposit date:1995-05-11
Release date:1996-01-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the cell cycle-regulatory protein suc1 reveals a beta-hinge conformational switch.
Proc.Natl.Acad.Sci.USA, 92, 1995
1RXM
DownloadVisualize
BU of 1rxm by Molmil
C-terminal region of FEN-1 bound to A. fulgidus PCNA
Descriptor: DNA polymerase sliding clamp, consensus FEN-1 peptide
Authors:Chapados, B.R, Hosfield, D.J, Han, S, Qiu, J, Yelent, B, Shen, B, Tainer, J.A.
Deposit date:2003-12-18
Release date:2004-01-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for FEN-1 Substrate Specificity and PCNA-Mediated Activation in DNA Replication and Repair
Cell(Cambridge,Mass.), 116, 2004

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon