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5XCC
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BU of 5xcc by Molmil
X-ray structure of Clostridium perfringens pili protein CppA
Descriptor: Probable surface protein
Authors:Kamitori, S, Tamai, E.
Deposit date:2017-03-22
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structures of major pilins in Clostridium perfringens demonstrate dynamic conformational change.
Acta Crystallogr D Struct Biol, 75, 2019
5XCB
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BU of 5xcb by Molmil
X-ray structure of domains D1 and D2 of Clostridium perfringens pili protein CppA
Descriptor: Probable surface protein
Authors:Kamitori, S, Tamai, E.
Deposit date:2017-03-22
Release date:2018-02-28
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structures of major pilins in Clostridium perfringens demonstrate dynamic conformational change.
Acta Crystallogr D Struct Biol, 75, 2019
5YFK
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BU of 5yfk by Molmil
X-ray structure of a mutant form C232S of Clostridium perfringens sortase B
Descriptor: Uncharacterized protein Sortase B
Authors:Kamitori, S, Tamai, E.
Deposit date:2017-09-21
Release date:2017-10-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray structure of Clostridium perfringens sortase B cysteine transpeptidase
Biochem. Biophys. Res. Commun., 493, 2017
6L68
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BU of 6l68 by Molmil
X-ray structure of human galectin-10 in complex with D-allose
Descriptor: Galectin-10, beta-D-allopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L67
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BU of 6l67 by Molmil
X-ray structure of human galectin-10 in complex with D-galactose
Descriptor: Galectin-10, beta-D-galactopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L6D
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BU of 6l6d by Molmil
X-ray structure of human galectin-10 in complex with D-N-acetylgalactosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, Galectin-10
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L6B
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BU of 6l6b by Molmil
X-ray structure of human galectin-10 in complex with L-fucose
Descriptor: Galectin-10, beta-L-fucopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L6C
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BU of 6l6c by Molmil
X-ray structure of human galectin-10 in complex with D-arabinose
Descriptor: Galectin-10, alpha-D-arabinopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L64
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BU of 6l64 by Molmil
X-ray structure of human galectin-10 in complex with D-glucose
Descriptor: Galectin-10, beta-D-glucopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L6A
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BU of 6l6a by Molmil
X-ray structure of human galectin-10 in complex with D-mannose
Descriptor: Galectin-10, beta-D-mannopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
7D6P
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BU of 7d6p by Molmil
X-ray structure of the intermolecular complex of Clostridium perfringens sortase C with the C-terminal cell wall sorting signal motif.
Descriptor: GLYCEROL, SULFATE ION, Sortase family protein
Authors:Kamitori, S, Tamai, E.
Deposit date:2020-10-01
Release date:2021-06-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:X-ray structures of Clostridium perfringens sortase C with C-terminal cell wall sorting motif of LPST demonstrate role of subsite for substrate-binding and structural variations of catalytic site.
Biochem.Biophys.Res.Commun., 554, 2021
7D6T
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BU of 7d6t by Molmil
X-ray structure of Clostridium perfringens sortase C with the C-terminal cell wall sorting motif.
Descriptor: Sortase family protein
Authors:Kamitori, S, Tamai, E.
Deposit date:2020-10-01
Release date:2021-06-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:X-ray structures of Clostridium perfringens sortase C with C-terminal cell wall sorting motif of LPST demonstrate role of subsite for substrate-binding and structural variations of catalytic site.
Biochem.Biophys.Res.Commun., 554, 2021
3VKN
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BU of 3vkn by Molmil
Galectin-8 N-terminal domain in free form
Descriptor: CHLORIDE ION, Galectin-8
Authors:Kamitori, S, Yoshida, H.
Deposit date:2011-11-18
Release date:2012-09-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains
Febs J., 279, 2012
3VKL
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BU of 3vkl by Molmil
Protease-resistant mutant form of human Galectin-8 in complex with two lactose molecules
Descriptor: 1,2-ETHANEDIOL, Galectin-8, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Kamitori, S, Yoshida, H.
Deposit date:2011-11-18
Release date:2012-09-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains
Febs J., 279, 2012
3VKO
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BU of 3vko by Molmil
Galectin-8 N-terminal domain in complex with sialyllactosamine
Descriptor: CHLORIDE ION, Galectin-8, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kamitori, S, Yoshida, H.
Deposit date:2011-11-18
Release date:2012-09-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains
Febs J., 279, 2012
2D58
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BU of 2d58 by Molmil
Human microglia-specific protein Iba1
Descriptor: Allograft inflammatory factor 1, NICKEL (II) ION
Authors:Kamitori, S.
Deposit date:2005-10-31
Release date:2006-10-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray Structures of the Microglia/Macrophage-specific Protein Iba1 from Human and Mouse Demonstrate Novel Molecular Conformation Change Induced by Calcium binding
J.Mol.Biol., 364, 2006
7F5I
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BU of 7f5i by Molmil
X-ray structure of Clostridium perfringens-specific amidase endolysin
Descriptor: GLUTAMIC ACID, SODIUM ION, ZINC ION, ...
Authors:Kamitori, S, Tamai, E.
Deposit date:2021-06-22
Release date:2022-05-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural and biochemical characterization of the Clostridium perfringens-specific Zn 2+ -dependent amidase endolysin, Psa, catalytic domain.
Biochem.Biophys.Res.Commun., 576, 2021
7CFL
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BU of 7cfl by Molmil
X-ray structure of autolysin Acd24020 catalytic domain from Clostridium difficile
Descriptor: CITRATE ANION, Putative cell wall hydrolase phosphatase-associated protein
Authors:Kamitori, S, Tamai, E.
Deposit date:2020-06-26
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural and biochemical characterizations of the novel autolysin Acd24020 from Clostridioides difficile and its full-function catalytic domain as a lytic enzyme.
Mol.Microbiol., 115, 2021
3B4X
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BU of 3b4x by Molmil
Crystal Structure Analysis of Sulfolobus tokodaii strain7 cytochrom P450
Descriptor: 367aa long hypothetical cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kamitori, S, Yoshida, H, Ohtaki, A, Nakamura, N.
Deposit date:2007-10-24
Release date:2008-11-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Monooxygenation by Thermophilic Cytochrome P450 via Direct Electron Transfer from NADH without Redox Partner
To be Published
1VFO
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BU of 1vfo by Molmil
Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase 2/beta-cyclodextrin complex
Descriptor: CALCIUM ION, Cyclic alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), ...
Authors:Ohtaki, A, Mizuno, M, Tonozuka, T, Sakano, Y, Kamitori, S.
Deposit date:2004-04-16
Release date:2005-02-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Complex structures of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with acarbose and cyclodextrins demonstrate the multiple substrate recognition mechanism
J.BIOL.CHEM., 279, 2004
4EN7
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BU of 4en7 by Molmil
Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-3-sialyllactosamine
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Hemagglutinin components HA-22/23/53, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Yamashita, S, Yoshida, H, Tonozuka, T, Nishikawa, A, Kamitori, S.
Deposit date:2012-04-12
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides
Febs Lett., 586, 2012
4EN8
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BU of 4en8 by Molmil
Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-6-sialyllactose
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Hemagglutinin components HA-22/23/53, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Yamashita, S, Yoshida, H, Tonozuka, T, Nishikawa, A, Kamitori, S.
Deposit date:2012-04-12
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides
Febs Lett., 586, 2012
4EN9
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BU of 4en9 by Molmil
Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-6-sialyllactosamine
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Hemagglutinin components HA-22/23/53, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Yamashita, S, Yoshida, H, Tonozuka, T, Nishikawa, A, Kamitori, S.
Deposit date:2012-04-12
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides
Febs Lett., 586, 2012
2QUL
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BU of 2qul by Molmil
Crystal structure of D-tagatose 3-epimerase from Pseudomonas cichorii at 1.79 A resolution
Descriptor: D-tagatose 3-epimerase, MANGANESE (II) ION
Authors:Yoshida, H, Yamada, M, Nishitani, T, Takada, G, Izumori, K, Kamitori, S.
Deposit date:2007-08-06
Release date:2007-12-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose
J.Mol.Biol., 374, 2007
2QUM
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BU of 2qum by Molmil
Crystal structure of D-tagatose 3-epimerase from Pseudomonas cichorii with D-tagatose
Descriptor: D-tagatose, D-tagatose 3-epimerase, MANGANESE (II) ION
Authors:Yoshida, H, Yamada, M, Nishitani, T, Takada, G, Izumori, K, Kamitori, S.
Deposit date:2007-08-06
Release date:2007-12-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose
J.Mol.Biol., 374, 2007

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