Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1QF7
DownloadVisualize
BU of 1qf7 by Molmil
STRUCTURE OF THE MUTANT HIS392GLN OF CATALASE HPII FROM E. COLI
Descriptor: PROTEIN (CATALASE HPII), PROTOPORPHYRIN IX CONTAINING FE
Authors:Mate, M.J, Loewen, P.C, Fita, I.
Deposit date:1999-03-26
Release date:1999-04-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutants that alter the covalent structure of catalase hydroperoxidase II from Escherichia coli.
J.Biol.Chem., 274, 1999
121D
DownloadVisualize
BU of 121d by Molmil
MOLECULAR STRUCTURE OF THE A-TRACT DNA DODECAMER D(CGCAAATTTGCG) COMPLEXED WITH THE MINOR GROOVE BINDING DRUG NETROPSIN
Descriptor: DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3'), NETROPSIN
Authors:Tabernero, L, Verdaguer, N, Coll, M, Fita, I, Van Der Marel, G.A, Van Boom, J.H, Rich, A, Aymami, J.
Deposit date:1993-04-14
Release date:1994-01-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular structure of the A-tract DNA dodecamer d(CGCAAATTTGCG) complexed with the minor groove binding drug netropsin.
Biochemistry, 32, 1993
1GG9
DownloadVisualize
BU of 1gg9 by Molmil
CRYSTAL STRUCTURE OF CATALASE HPII FROM ESCHERICHIA COLI, HIS128ASN VARIANT.
Descriptor: CATALASE HPII, PROTOPORPHYRIN IX CONTAINING FE
Authors:Melik-Adamyan, W.R, Bravo, J, Carpena, X, Switala, J, Mate, M.J, Fita, I, Loewen, P.C.
Deposit date:2000-08-11
Release date:2000-08-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Substrate flow in catalases deduced from the crystal structures of active site variants of HPII from Escherichia coli.
Proteins, 44, 2001
1B7B
DownloadVisualize
BU of 1b7b by Molmil
Carbamate kinase from Enterococcus faecalis
Descriptor: CARBAMATE KINASE, SULFATE ION
Authors:Marina, A, Alzari, P.M, Bravo, J, Uriarte, M, Barcelona, B, Fita, I, Rubio, V.
Deposit date:1999-01-20
Release date:2000-01-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Carbamate kinase: New structural machinery for making carbamoyl phosphate, the common precursor of pyrimidines and arginine.
Protein Sci., 8, 1999
1YDX
DownloadVisualize
BU of 1ydx by Molmil
Crystal structure of Type-I restriction-modification system S subunit from M. genitalium
Descriptor: CHLORIDE ION, type I restriction enzyme specificity protein MG438
Authors:Machado, B, Quijada, O, Pinol, J, Fita, I, Querol, E, Carpena, X.
Deposit date:2004-12-27
Release date:2005-08-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of a Putative Type I Restriction-Modification S Subunit from Mycoplasma genitalium
J.Mol.Biol., 351, 2005
1YE9
DownloadVisualize
BU of 1ye9 by Molmil
Crystal structure of proteolytically truncated catalase HPII from E. coli
Descriptor: CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, catalase HPII
Authors:Loewen, P.C, Chelikani, P, Carpena, X, Fita, I, Perez-Luque, R, Donald, L.J, Switala, J, Duckworth, H.W.
Deposit date:2004-12-28
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterization of a Large Subunit Catalase Truncated by Proteolytic Cleavage(,)
Biochemistry, 44, 2005
1ZUA
DownloadVisualize
BU of 1zua by Molmil
Crystal Structure Of AKR1B10 Complexed With NADP+ And Tolrestat
Descriptor: Aldo-keto reductase family 1 member B10, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TOLRESTAT
Authors:Gallego, O, Ruiz, F.X, Ardevol, A, Dominguez, M, Alvarez, R, de Lera, A.R, Rovira, C, Farres, J, Fita, I, Pares, X.
Deposit date:2005-05-30
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural basis for the high all-trans-retinaldehyde reductase activity of the tumor marker AKR1B10.
Proc.Natl.Acad.Sci.USA, 104, 2007
1E19
DownloadVisualize
BU of 1e19 by Molmil
Structure of the carbamate kinase-like carbamoyl phosphate synthetase from the hyperthermophilic archaeon Pyrococcus furiosus bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CARBAMATE KINASE, MAGNESIUM ION
Authors:Ramon-Maiques, S, Marina, A, Uriarte, M, Fita, I, Rubio, V.
Deposit date:2000-04-28
Release date:2000-07-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The 1.5-A Resolution Crystal Structure of the Carbamate Kinase-Like Carbamoyl Phosphate Synthetase from the Hyperthermophilic Archaeon Pyrococcus Furiosus, Bound to Adp, Confirms that This Thermoestable Enzyme is a Carbamate Kinase, and Provides Insights Into Substrate Binding and Stability in Carbamate Kinases
J.Mol.Biol., 299, 2000
1DSY
DownloadVisualize
BU of 1dsy by Molmil
C2 DOMAIN FROM PROTEIN KINASE C (ALPHA) COMPLEXED WITH CA2+ AND PHOSPHATIDYLSERINE
Descriptor: 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, CALCIUM ION, PHOSPHATE ION, ...
Authors:Verdaguer, N, Corbalan-Garcia, S, Ochoa, W.F, Fita, I, Gomez-Fernandez, J.C.
Deposit date:2000-01-10
Release date:2000-01-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Ca(2+) bridges the C2 membrane-binding domain of protein kinase Calpha directly to phosphatidylserine.
EMBO J., 18, 1999
2A9E
DownloadVisualize
BU of 2a9e by Molmil
Helicobacter pylori catalase compound I
Descriptor: ACETATE ION, KatA Catalase, OXYGEN ATOM, ...
Authors:Loewen, P.C, Carpena, X, Fita, I.
Deposit date:2005-07-11
Release date:2006-06-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Helicobacter pylori catalase compound I
To be Published
1EJO
DownloadVisualize
BU of 1ejo by Molmil
FAB FRAGMENT OF NEUTRALISING MONOCLONAL ANTIBODY 4C4 COMPLEXED WITH G-H LOOP FROM FMDV.
Descriptor: FMDV PEPTIDE, IGG2A MONOCLONAL ANTIBODY (HEAVY CHAIN), IGG2A MONOCLONAL ANTIBODY (LIGHT CHAIN)
Authors:Ochoa, W.F, Kalko, S.G, Gomes, P, Fita, I, Verdaguer, N.
Deposit date:2000-03-03
Release date:2000-03-22
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A multiply substituted G-H loop from foot-and-mouth disease virus in complex with a neutralizing antibody: a role for water molecules.
J.Gen.Virol., 81, 2000
2BIS
DownloadVisualize
BU of 2bis by Molmil
Structure of glycogen synthase from Pyrococcus abyssi
Descriptor: 1,4-DIETHYLENE DIOXIDE, GLGA GLYCOGEN SYNTHASE, GLYCEROL, ...
Authors:Horcajada, C, Guinovart, J.J, Fita, I, Ferrer, J.C.
Deposit date:2005-01-25
Release date:2005-11-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of an Archaeal Glycogen Synthase: Insights Into Oligomerisation and Substrate Binding of Eukaryotic Glycogen Synthases.
J.Biol.Chem., 281, 2006
2BFW
DownloadVisualize
BU of 2bfw by Molmil
Structure of the C domain of glycogen synthase from Pyrococcus abyssi
Descriptor: ACETATE ION, GLGA GLYCOGEN SYNTHASE, SULFATE ION
Authors:Horcajada, C, Guinovart, J.J, Fita, I, Ferrer, J.C.
Deposit date:2004-12-15
Release date:2005-11-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of an Archaeal Glycogen Synthase: Insights Into Oligomerisation and Substrate Binding of Eukaryotic Glycogen Synthases.
J.Biol.Chem., 281, 2006
2BTY
DownloadVisualize
BU of 2bty by Molmil
Acetylglutamate kinase from Thermotoga maritima complexed with its inhibitor arginine
Descriptor: ACETYLGLUTAMATE KINASE, ARGININE, N-ACETYL-L-GLUTAMATE, ...
Authors:Gil-Ortiz, F, Fernandez-Murga, M.L, Fita, I, Rubio, V.
Deposit date:2005-06-08
Release date:2005-12-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural Bases of Feed-Back Control of Arginine Biosynthesis, Revealed by the Structure of Two Hexameric N-Acetylglutamate Kinases, from Thermotoga Maritima and Pseudomonas Aeruginosa
J.Mol.Biol., 356, 2006
2J8Z
DownloadVisualize
BU of 2j8z by Molmil
Crystal Structure of human P53 inducible oxidoreductase (TP53I3,PIG3)
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, QUINONE OXIDOREDUCTASE
Authors:Pike, A.C.W, Shafqat, N, Debreczeni, J, Johansson, C, Haroniti, A, Gileadi, O, Arrowsmith, C.H, Edwards, A, Weigelt, J, Sundstrom, M, von Delft, F, Porte, S, Fita, I, Pares, J, Pares, X, Oppermann, U.
Deposit date:2006-10-31
Release date:2006-11-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-Dimensional Structure and Enzymatic Function of Proapoptotic Human P53-Inducible Quinone Oxidoreductase Pig3.
J.Biol.Chem., 284, 2009
2JJ4
DownloadVisualize
BU of 2jj4 by Molmil
The complex of PII and acetylglutamate kinase from Synechococcus elongatus PCC7942
Descriptor: ACETYLGLUTAMATE KINASE, N-ACETYL-L-GLUTAMATE, NITROGEN REGULATORY PROTEIN P-II
Authors:Llacer, J.L, Marco-Marin, C, Gil-Ortiz, F, Fita, I, Rubio, V.
Deposit date:2007-07-04
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.46 Å)
Cite:The Crystal Structure of the Complex of Pii and Acetylglutamate Kinase Reveals How Pii Controls the Storage of Nitrogen as Arginine
Proc.Natl.Acad.Sci.USA, 104, 2007
2D47
DownloadVisualize
BU of 2d47 by Molmil
MOLECULAR STRUCTURE OF A COMPLETE TURN OF A-DNA
Descriptor: DNA (5'-D(*CP*CP*CP*CP*CP*GP*CP*GP*GP*GP*GP*G)-3'), SPERMINE
Authors:Verdaguer, N, Aymami, J, Fernandez-Forner, D, Fita, I, Coll, M, Huynh-Dinh, T, Igolen, J, Subirana, J.A.
Deposit date:1991-10-02
Release date:1991-10-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular structure of a complete turn of A-DNA.
J.Mol.Biol., 221, 1991
2OBY
DownloadVisualize
BU of 2oby by Molmil
Crystal structure of Human P53 inducible oxidoreductase (TP53I3,PIG3)
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative quinone oxidoreductase
Authors:Porte, S, Valencia, E, Farres, J, Fita, I, Pike, A.C.W, Shafqat, N, Debreczeni, J, Johansson, C, Haroniti, A, Gileadi, O, Arrowsmith, C.H, Edwards, A, Weigelt, J, Sundstrom, M, von Delft, F, Oppermann, U, Pares, X.
Deposit date:2006-12-20
Release date:2007-01-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human P53 inducible oxidoreductase (TP53I3, PIG3)
To be Published
2O4I
DownloadVisualize
BU of 2o4i by Molmil
Structure of TREX1 in complex with DNA
Descriptor: 5'-D(*GP*CP*TP*AP*GP*GP*CP*AP*GP*GP*AP*AP*CP*CP*CP*CP*TP*CP*CP*TP*CP*CP*CP*CP*T)-3', Three prime repair exonuclease 1
Authors:Brucet, M, Macias, M.J, Fita, I, Celada, A.
Deposit date:2006-12-04
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the dimeric exonuclease TREX1 in complex with DNA displays a proline-rich binding site for WW Domains.
J.Biol.Chem., 282, 2007
2O4G
DownloadVisualize
BU of 2o4g by Molmil
Structure of TREX1 in complex with a nucleotide
Descriptor: MAGNESIUM ION, THYMIDINE-5'-PHOSPHATE, Three prime repair exonuclease 1
Authors:Brucet, M, Macias, M.J, Fita, I, Celada, A.
Deposit date:2006-12-04
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of the dimeric exonuclease TREX1 in complex with DNA displays a proline-rich binding site for WW Domains.
J.Biol.Chem., 282, 2007
2PMP
DownloadVisualize
BU of 2pmp by Molmil
Structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from the isoprenoid biosynthetic pathway of Arabidopsis thaliana
Descriptor: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, CHLORIDE ION, CYTIDINE-5'-MONOPHOSPHATE, ...
Authors:Calisto, B.M, Perez-Gil, J, Querol-Audi, J, Fita, I, Imperial, S.
Deposit date:2007-04-23
Release date:2007-09-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Biosynthesis of isoprenoids in plants: Structure of the 2C-methyl-D-erithrytol 2,4-cyclodiphosphate synthase from Arabidopsis thaliana. Comparison with the bacterial enzymes.
Protein Sci., 16, 2007
2IQF
DownloadVisualize
BU of 2iqf by Molmil
Crystal structure of Helicobacter pylori catalase compound I
Descriptor: ACETATE ION, Catalase, OXYGEN ATOM, ...
Authors:Loewen, P.C, Carpena, X, Fita, I.
Deposit date:2006-10-13
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:The structures and electronic configuration of compound I intermediates of Helicobacter pylori and Penicillium vitale catalases determined by X-ray crystallography and QM/MM density functional theory calculations.
J.Am.Chem.Soc., 129, 2007
6RUX
DownloadVisualize
BU of 6rux by Molmil
P46, an immunodominant surface protein from Mycoplasma hyopneumoniae
Descriptor: 46 kDa surface antigen, SODIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Guasch, A, Gonzalez-Gonzalez, L, Fita, I.
Deposit date:2019-05-29
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of P46, an immunodominant surface protein from Mycoplasma hyopneumoniae: interaction with a monoclonal antibody.
Acta Crystallogr D Struct Biol, 76, 2020
6S3T
DownloadVisualize
BU of 6s3t by Molmil
P46, an immunodominant surface protein from Mycoplasma hyopneumoniae
Descriptor: 46 kDa surface antigen, Immunoglobulin heavy chain, Immunoglobulin light chain, ...
Authors:Guasch, A, Gonzalez-Gonzalez, L, Fita, I.
Deposit date:2019-06-26
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of P46, an immunodominant surface protein from Mycoplasma hyopneumoniae: interaction with a monoclonal antibody.
Acta Crystallogr D Struct Biol, 76, 2020
6RQG
DownloadVisualize
BU of 6rqg by Molmil
P46, an immunodominant surface protein from Mycoplasma hyopneumoniae
Descriptor: 46 kDa surface antigen, SODIUM ION
Authors:Guasch, A, Fita, I.
Deposit date:2019-05-15
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of P46, an immunodominant surface 58 protein from Mycoplasma hyopneumoniae:interaction with a monoclonal antibody
Acta Crys Section D, D76, 2020

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon