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3KNP
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BU of 3knp by Molmil
Crystal structure of DTD from Plasmodium falciparum
Descriptor: D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-12
Release date:2009-12-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KOB
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BU of 3kob by Molmil
DTD from Plasmodium falciparum in complex with D-Glutamic acid
Descriptor: D-GLUTAMIC ACID, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
7VC5
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BU of 7vc5 by Molmil
Toxoplasma gondii Prolyl-tRNA Synthetase (TgPRS) in Complex with inhibitor T35 and Febrifugine (FF) at 1.61 A resolution
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one, ...
Authors:Manickam, Y, Malhotra, N, Sharma, A.
Deposit date:2021-09-01
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.612 Å)
Cite:TgPRS with double inhibitors
To Be Published
7V8J
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BU of 7v8j by Molmil
Toxoplasma gondii Prolyl-tRNA Synthetase (TgPRS) in complex with the reaction intermediates proline-adenylate (Pro-AMP) and pyrophosphate
Descriptor: 1,2-ETHANEDIOL, 5'-O-[(R)-hydroxy{[(2S)-pyrrolidin-2-ylcarbonyl]oxy}phosphoryl]adenosine, PROLINE, ...
Authors:Manickam, Y, Malhotra, N, Sharma, A.
Deposit date:2021-08-23
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.519 Å)
Cite:Toxoplasma gondii Prolyl-tRNA Synthetase (TgPRS) in complex with the reaction intermediates proline-adenylate (Pro-AMP) and pyrophosphate
To Be Published
7V9D
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BU of 7v9d by Molmil
Plasmodium falciparum Prolyl-tRNA Synthetase (PfPRS) in Complex with inhibitor L95 and azetidine
Descriptor: (2S)-azetidine-2-carboxylic acid, 1,2-ETHANEDIOL, 1,4-BUTANEDIOL, ...
Authors:Manickam, Y, Malhotra, N, Sharma, A.
Deposit date:2021-08-24
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.937 Å)
Cite:Plasmodium falciparum Prolyl-tRNA Synthetase (PfPRS) in Complex with inhibitor L95 and azetidine
To Be Published
3KO4
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BU of 3ko4 by Molmil
Crystal structure of D-Tyr-tRNA(Tyr) deacylase from Plasmodium falciparum in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KOC
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BU of 3koc by Molmil
DTD from Plasmodium falciparum in complex with D-Histidine
Descriptor: D-HISTIDINE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
7V8K
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BU of 7v8k by Molmil
Toxoplasma gondii Prolyl-tRNA Synthetase (TgPRS) in Complex with L-Proline
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, IMIDAZOLE, ...
Authors:Manickam, Y, Malhotra, N, Sharma, A.
Deposit date:2021-08-23
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Toxoplasma gondii Prolyl-tRNA Synthetase (TgPRS) in Complex with L-Proline
To Be Published
3KNF
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BU of 3knf by Molmil
Crystal structure of D-Tyr-tRNA(Tyr) deacylase from Plasmodium falciparum
Descriptor: D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-12
Release date:2009-12-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KO7
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BU of 3ko7 by Molmil
DTD from Plasmodium falciparum in complex with D-Lysine
Descriptor: D-LYSINE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KO3
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BU of 3ko3 by Molmil
D-tyrosyl-tRNA(Tyr) deacylase from Plasmodium falciparum incomplex with ADP, obtained through soaking native enzyme crystal with the ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KOD
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BU of 3kod by Molmil
DTD from Plasmodium falciparum in complex with D-Serine
Descriptor: D-SERINE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KO5
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BU of 3ko5 by Molmil
D-Tyr-tRNA(Tyr) deacylase from Plasmodium falciparum in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3KO9
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BU of 3ko9 by Molmil
DTD from Plasmodium falciparum in complex with D-Arginine
Descriptor: D-ARGININE, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Manickam, Y, Bhatt, T.K, Sharma, A.
Deposit date:2009-11-13
Release date:2009-12-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
3LMU
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BU of 3lmu by Molmil
Crystal structure of DTD from Plasmodium falciparum
Descriptor: D-tyrosyl-tRNA(Tyr) deacylase, IODIDE ION
Authors:Manickam, Y, Bhatt, T.K, Khan, S, Sharma, A.
Deposit date:2010-02-01
Release date:2010-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of D-tyrosyl-tRNATyr deacylase using home-source Cu Kalpha and moderate-quality iodide-SAD data: structural polymorphism and HEPES-bound enzyme states
Acta Crystallogr.,Sect.D, 66, 2010
3LMT
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BU of 3lmt by Molmil
Crystal structure of DTD from Plasmodium falciparum
Descriptor: D-tyrosyl-tRNA(Tyr) deacylase, IODIDE ION
Authors:Manickam, Y, Bhatt, T.K, Khan, S, Sharma, A.
Deposit date:2010-02-01
Release date:2010-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure of D-tyrosyl-tRNATyr deacylase using home-source Cu Kalpha and moderate-quality iodide-SAD data: structural polymorphism and HEPES-bound enzyme states
Acta Crystallogr.,Sect.D, 66, 2010
3LMV
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BU of 3lmv by Molmil
D-Tyr-tRNA(Tyr) Deacylase from plasmodium falciparum in complex with hepes
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, D-tyrosyl-tRNA(Tyr) deacylase, SULFITE ION
Authors:Manickam, Y, Khan, S, Bhatt, T.K, Sharma, A.
Deposit date:2010-02-01
Release date:2010-03-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.833 Å)
Cite:Structure of D-tyrosyl-tRNATyr deacylase using home-source Cu Kalpha and moderate-quality iodide-SAD data: structural polymorphism and HEPES-bound enzyme states
Acta Crystallogr.,Sect.D, 66, 2010
3ZVQ
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BU of 3zvq by Molmil
Crystal Structure of proteolyzed lysozyme
Descriptor: LYSOZYME C
Authors:Kishan, K.V, Sharma, A.
Deposit date:2011-07-26
Release date:2011-10-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Salt-assisted religation of proteolyzed Glutathione-S-transferase follows Hofmeister series.
Protein Pept.Lett., 17, 2010
4LJM
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BU of 4ljm by Molmil
Crystal structure of C-terminal RNA recognition motif of human ETR3
Descriptor: CUGBP Elav-like family member 2
Authors:Kashyap, M, Sharma, A, Yogavel, M, Bhavesh, N.S.
Deposit date:2013-07-05
Release date:2014-07-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of C-terminal RNA recognition motif of human ETR3
To be Published
4LNS
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BU of 4lns by Molmil
Crystal structure of Asparagine synthetase A (AsnA) from Trypanosoma brucei
Descriptor: Asparagine synthetase a
Authors:Khan, S, Madhubala, R, Sharma, A.
Deposit date:2013-07-12
Release date:2014-03-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Identification and functional characterization of a novel bacterial type asparagine synthetase A: a tRNA synthetase paralog from Leishmania donovani.
J.Biol.Chem., 289, 2014
2Q2L
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BU of 2q2l by Molmil
Crystal Structure of Superoxide Dismutase from P. atrosanguina
Descriptor: IODIDE ION, Superoxide Dismutase, ZINC ION
Authors:Manickam, Y, Gill, J, Mishra, P.C, Sharma, A.
Deposit date:2007-05-29
Release date:2008-03-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.367 Å)
Cite:SAD phasing of a structure based on cocrystallized iodides using an in-house Cu Kalpha X-ray source: effects of data redundancy and completeness on structure solution
Acta Crystallogr.,Sect.D, 63, 2007
4N10
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BU of 4n10 by Molmil
Crystal structure of plasmodium falciparum oxidized glutaredoxin 1 (PfGrx1) complexed with cisplatin
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Cisplatin, ...
Authors:Yogavel, M, Sharma, A.
Deposit date:2013-10-03
Release date:2014-10-08
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Interaction of Cisplatin with plasmodium falciparum Glutaredoxin 1
To be Published
4N11
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BU of 4n11 by Molmil
Crystal structure of plasmodium falciparum reduced glutaredoxin 1 (PfGrx1) complexed with cisplatin
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Cisplatin, ...
Authors:Yogavel, M, Sharma, A.
Deposit date:2013-10-03
Release date:2014-10-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Interaction of Cisplatin with plasmodium falciparum Glutaredoxin 1
To be Published
4N0Z
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BU of 4n0z by Molmil
Crystal structure of cisplatin bound to a plasmodium falciparum glutaredoxin 1 (PfGrx1)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Cisplatin, ...
Authors:Yogavel, M, Sharma, A.
Deposit date:2013-10-03
Release date:2014-10-08
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Interaction of Cisplatin with plasmodium falciparum Glutaredoxin 1
To be Published
5TN9
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BU of 5tn9 by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (L372S,L536S) in Complex with the OBHS-BSC, 4-bromophenyl (1R,2R,4S)-5-(4-hydroxyphenyl)-6-(4-(2-(piperidin-1-yl)ethoxy)phenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate
Descriptor: 4-bromophenyl (1S,2R,4S)-5-(4-hydroxyphenyl)-6-{4-[2-(piperidin-1-yl)ethoxy]phenyl}-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate, Estrogen receptor
Authors:Nwachukwu, J.C, Sharma, N, Carlson, K.E, Srinivasan, S, Sharma, A, Katzenellenbogen, J.A, Nettles, K.W.
Deposit date:2016-10-13
Release date:2017-02-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.253 Å)
Cite:Exploring the Structural Compliancy versus Specificity of the Estrogen Receptor Using Isomeric Three-Dimensional Ligands.
ACS Chem. Biol., 12, 2017

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PDB entries from 2024-06-05

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