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7WLC
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BU of 7wlc by Molmil
SARS-CoV-2 Omicron variant spike RBD in complex with Fab XGv282
Descriptor: Heavy chain of XGv282, Light chain of XGv282, Spike protein S1
Authors:Wang, X, Wang, L.
Deposit date:2022-01-13
Release date:2022-04-13
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants.
Nature, 603, 2022
7WED
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BU of 7wed by Molmil
SARS-CoV-2 Omicron variant spike RBD in complex with Fab XGv347
Descriptor: Spike protein S1, The heavy chain of Fab XGv347, The light chain of Fab XGv347
Authors:Wang, X, Wang, L.
Deposit date:2021-12-23
Release date:2022-04-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants.
Nature, 603, 2022
6LXW
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BU of 6lxw by Molmil
Cryo-EM structure of human secretory immunoglobulin A in complex with the N-terminal domain of SpsA
Descriptor: Immunoglobulin J chain, Interleukin-2,Immunoglobulin heavy constant alpha 1, Polymeric immunoglobulin receptor, ...
Authors:Wang, Y, Wang, G, Li, Y, Xiao, J.
Deposit date:2020-02-12
Release date:2020-05-27
Last modified:2020-07-22
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Structural insights into secretory immunoglobulin A and its interaction with a pneumococcal adhesin.
Cell Res., 30, 2020
8JBB
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BU of 8jbb by Molmil
Crystal Structure of the Csm6 from Thermus thermophilus HB8 in complex with A2>p
Descriptor: CRISPR system endoribonuclease Csm6, RNA (5'-R(*AP*(A23))-3')
Authors:Lin, Z, Du, L.
Deposit date:2023-05-08
Release date:2023-12-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Molecular mechanism of allosteric activation of the CRISPR ribonuclease Csm6 by cyclic tetra-adenylate.
Embo J., 43, 2024
8JH1
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BU of 8jh1 by Molmil
Crystal Structure of the Csm6 Y161A mutant from Thermus thermophilus HB8 in complex with cyclic-tetraadenylate (cA4)
Descriptor: CRISPR system endoribonuclease Csm6, RNA (5'-R(P*AP*AP*AP*A)-3')
Authors:Lin, Z, Du, L.
Deposit date:2023-05-22
Release date:2023-12-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Molecular mechanism of allosteric activation of the CRISPR ribonuclease Csm6 by cyclic tetra-adenylate.
Embo J., 43, 2024
8JBC
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BU of 8jbc by Molmil
Crystal Structure of the Csm6 K137A mutant from Thermus thermophilus HB8 in its apo form
Descriptor: CRISPR system endoribonuclease Csm6, NICKEL (II) ION
Authors:Lin, Z, Du, L.
Deposit date:2023-05-08
Release date:2023-12-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Molecular mechanism of allosteric activation of the CRISPR ribonuclease Csm6 by cyclic tetra-adenylate.
Embo J., 43, 2024
6K1Z
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BU of 6k1z by Molmil
Crystal structure of farnesylated hGBP1
Descriptor: FARNESYL, Guanylate-binding protein 1
Authors:Du, S, Xiao, J.Y.
Deposit date:2019-05-13
Release date:2019-06-12
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.307 Å)
Cite:Structural mechanism for guanylate-binding proteins (GBPs) targeting by the Shigella E3 ligase IpaH9.8.
Plos Pathog., 15, 2019
6K2D
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BU of 6k2d by Molmil
The crystal structure of GBP1 with LRR domain of IpaH9.8
Descriptor: E3 ubiquitin-protein ligase ipaH9.8, Guanylate-binding protein 1
Authors:Ji, C.G, Xiao, J.Y.
Deposit date:2019-05-14
Release date:2019-06-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural mechanism for guanylate-binding proteins (GBPs) targeting by the Shigella E3 ligase IpaH9.8.
Plos Pathog., 15, 2019
5XOM
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BU of 5xom by Molmil
Hydra Fam20
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosaminoglycan xylosylkinase
Authors:Xiao, J, Zhang, H.
Deposit date:2017-05-29
Release date:2018-04-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and evolution of the Fam20 kinases
Nat Commun, 9, 2018
5Y4G
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BU of 5y4g by Molmil
Apo Structure of AmbP3
Descriptor: AmbP3
Authors:Wong, C.P, Awakawa, T, Nakashima, Y.
Deposit date:2017-08-03
Release date:2018-07-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3
Angew. Chem. Int. Ed. Engl., 57, 2018
5Y72
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BU of 5y72 by Molmil
DMSPP Bound AmbP3
Descriptor: AmbP3, DIMETHYLALLYL S-THIOLODIPHOSPHATE
Authors:Wong, C.P, Awakawa, T, Nakashima, Y.
Deposit date:2017-08-16
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3
Angew. Chem. Int. Ed. Engl., 57, 2018
5Y84
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BU of 5y84 by Molmil
Hapalindole U and DMSPP Bound AmbP3
Descriptor: AmbP3, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Hapalindole U
Authors:Wong, C.P, Awakawa, T, Nakashima, Y.
Deposit date:2017-08-18
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3
Angew. Chem. Int. Ed. Engl., 57, 2018
5Y7C
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BU of 5y7c by Molmil
Hapalindole A and DMSPP Bound AmbP3
Descriptor: AmbP3, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Hapalindole A
Authors:Wong, C.P, Awakawa, T, Nakashima, Y.
Deposit date:2017-08-16
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3
Angew. Chem. Int. Ed. Engl., 57, 2018
5YH0
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BU of 5yh0 by Molmil
The structure of DrFam20C1
Descriptor: DrFam20C1
Authors:Zhang, H, Xiao, J.
Deposit date:2017-09-27
Release date:2018-04-11
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Structure and evolution of the Fam20 kinases
Nat Commun, 9, 2018
5YH2
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BU of 5yh2 by Molmil
The structure of DrFam20C1 and hFam20A complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Family with sequence similarity 20, member Ca, ...
Authors:Zhang, H, Xiao, J.
Deposit date:2017-09-27
Release date:2018-04-11
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Structure and evolution of the Fam20 kinases
Nat Commun, 9, 2018
7XAC
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BU of 7xac by Molmil
Dimeric structure of human galectin-7 in complex with two glycerol
Descriptor: GLYCEROL, Galectin-7
Authors:Si, Y.L.
Deposit date:2022-03-17
Release date:2023-01-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Binding of Glycerol to Human Galectin-7 Expands Stability and Modulates Its Functions.
Int J Mol Sci, 23, 2022
7XBL
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BU of 7xbl by Molmil
Dimeric structure of human galectin-7 in complex with three glycerol
Descriptor: GLYCEROL, Galectin-7
Authors:Si, Y.L.
Deposit date:2022-03-21
Release date:2023-01-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding of Glycerol to Human Galectin-7 Expands Stability and Modulates Its Functions.
Int J Mol Sci, 23, 2022
7WG6
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BU of 7wg6 by Molmil
Neutral Omicron Spike Trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Cui, Z, Wang, X.
Deposit date:2021-12-28
Release date:2022-05-18
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7WG9
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BU of 7wg9 by Molmil
Delta Spike Trimer(1 RBD Up)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7WG7
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BU of 7wg7 by Molmil
Acidic Omicron Spike Trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7WGC
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BU of 7wgc by Molmil
Neutral Omicron Spike Trimer in complex with ACE2.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Last modified:2022-07-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7WGB
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BU of 7wgb by Molmil
Neutral Omicron Spike Trimer in complex with ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7WG8
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BU of 7wg8 by Molmil
Delta Spike Trimer(3 RBD Down)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7W16
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BU of 7w16 by Molmil
Complex structure of alginate lyase AlyV with M8
Descriptor: GLYCEROL, alginate lyase, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid
Authors:Liu, W.Z, Lyu, Q.Q, Li, Z.J, Zhang, K.K.
Deposit date:2021-11-19
Release date:2022-08-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Determination of oligosaccharide product distributions of PL7 alginate lyases by their structural elements.
Commun Biol, 5, 2022
7W18
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BU of 7w18 by Molmil
Complex structure of alginate lyase PyAly with M5
Descriptor: Alginate lyase, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid
Authors:Liu, W.Z, Lyu, Q.Q, Zhang, K.K.
Deposit date:2021-11-19
Release date:2022-08-17
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Determination of oligosaccharide product distributions of PL7 alginate lyases by their structural elements.
Commun Biol, 5, 2022

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