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3II1
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BU of 3ii1 by Molmil
Structural characterization of difunctional glucanase-xylanse CelM2
Descriptor: Cellulase, ZINC ION, beta-D-glucopyranose
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2009-07-31
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural characterization of the bifunctional glucanase-xylanase CelM2 reveals the metal effect and substrate-binding moiety
Biochem.Biophys.Res.Commun., 391, 2010
3G6N
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BU of 3g6n by Molmil
Crystal structure of an EfPDF complex with Met-Ala-Ser
Descriptor: FE (III) ION, Peptide deformylase, SODIUM ION, ...
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2009-02-07
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an EfPDF complex with Met-Ala-Ser based on crystallographic packing.
Biochem.Biophys.Res.Commun., 381, 2009
3K6K
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BU of 3k6k by Molmil
Crystal structure at 2.2 angstrom of HSL-homolog EstE7 from a metagenome library
Descriptor: BETA-MERCAPTOETHANOL, Esterase/lipase, SULFATE ION
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2009-10-09
Release date:2009-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biochemical and structural analysis of hormone-sensitive lipase homolog EstE7; Insight into the stabilized dimerization of HSL-homolog proteins
to be published
3H17
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BU of 3h17 by Molmil
Crystal structure of EstE5-PMSF (I)
Descriptor: Esterase/lipase, phenylmethanesulfonic acid
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2009-04-11
Release date:2009-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of an HSL-homolog EstE5 complex with PMSF reveals a unique configuration that inhibits the nucleophile Ser144 in catalytic triads.
Biochem.Biophys.Res.Commun., 389, 2009
3H18
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BU of 3h18 by Molmil
Crystal structure of EstE5-PMSF (II)
Descriptor: Esterase/lipase, phenylmethanesulfonic acid
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2009-04-11
Release date:2009-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of an HSL-homolog EstE5 complex with PMSF reveals a unique configuration that inhibits the nucleophile Ser144 in catalytic triads.
Biochem.Biophys.Res.Commun., 389, 2009
3GVY
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BU of 3gvy by Molmil
Crystal structure of bacterioferritin from R.sphaeroides
Descriptor: Bacterioferritin, FE (III) ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2009-03-31
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of bacterioferritin from Rhodobacter sphaeroides
Biochem.Biophys.Res.Commun., 391, 2010
8IH0
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BU of 8ih0 by Molmil
Crystal structure of GH11 from Thermoanaerobacterium saccharolyticum
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2023-02-22
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Characterization and structural analysis of the endo-1,4-beta-xylanase GH11 from the hemicellulose-degrading Thermoanaerobacterium saccharolyticum useful for lignocellulose saccharification.
Sci Rep, 13, 2023
8IH1
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BU of 8ih1 by Molmil
Room temperature structure of GH11 from Thermoanaerobacterium saccharolyticum by serial crystallography
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2023-02-22
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Characterization and structural analysis of the endo-1,4-beta-xylanase GH11 from the hemicellulose-degrading Thermoanaerobacterium saccharolyticum useful for lignocellulose saccharification.
Sci Rep, 13, 2023
3S5U
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BU of 3s5u by Molmil
Crystal structure of CRISPR associated protein
Descriptor: CALCIUM ION, Putative uncharacterized protein
Authors:Ke, A, Nam, K.H.
Deposit date:2011-05-23
Release date:2011-06-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of clustered regularly interspaced short palindromic repeats (CRISPR)-associated Csn2 protein revealed Ca2+-dependent double-stranded DNA binding activity.
J. Biol. Chem., 286, 2011
4ES3
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BU of 4es3 by Molmil
Double-stranded Endonuclease Activity in B. halodurans Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-associated Cas2 Protein
Descriptor: 1,2-ETHANEDIOL, BH0342 protein
Authors:Ke, A, Nam, K.H.
Deposit date:2012-04-21
Release date:2012-08-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.704 Å)
Cite:Double-stranded endonuclease activity in Bacillus halodurans clustered regularly interspaced short palindromic repeats (CRISPR)-associated Cas2 protein.
J. Biol. Chem., 287, 2012
4ES1
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BU of 4es1 by Molmil
Double-stranded Endonuclease Activity in B. halodurans Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-associated Cas2 Protein
Descriptor: BH0342 protein
Authors:Ke, A, Nam, K.H.
Deposit date:2012-04-21
Release date:2012-08-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Double-stranded endonuclease activity in Bacillus halodurans clustered regularly interspaced short palindromic repeats (CRISPR)-associated Cas2 protein.
J. Biol. Chem., 287, 2012
4F3M
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BU of 4f3m by Molmil
Crystal structure of CRISPR-associated protein
Descriptor: 1,2-ETHANEDIOL, BH0337 protein, SULFATE ION
Authors:Ke, A, Nam, K.H.
Deposit date:2012-05-09
Release date:2012-08-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Cas5d Protein Processes Pre-crRNA and Assembles into a Cascade-like Interference Complex in Subtype I-C/Dvulg CRISPR-Cas System.
Structure, 20, 2012
4ES2
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BU of 4es2 by Molmil
Double-stranded Endonuclease Activity in B. halodurans Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-associated Cas2 Protein
Descriptor: BH0342 protein
Authors:Ke, A, Nam, K.H.
Deposit date:2012-04-21
Release date:2012-08-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.299 Å)
Cite:Double-stranded endonuclease activity in Bacillus halodurans clustered regularly interspaced short palindromic repeats (CRISPR)-associated Cas2 protein.
J. Biol. Chem., 287, 2012
3CMD
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BU of 3cmd by Molmil
Crystal structure of peptide deformylase from VRE-E.faecium
Descriptor: FE (III) ION, MALONATE ION, Peptide deformylase, ...
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2008-03-21
Release date:2009-01-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Insight into the antibacterial drug design and architectural mechanism of peptide recognition from the E. faecium peptide deformylase structure.
Proteins, 74, 2009
3CMJ
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BU of 3cmj by Molmil
Crystal Structure of engineered Beta-Glucosidase from Soil metagenome
Descriptor: Beta-glucosidase, S,R MESO-TARTARIC ACID, SODIUM ION
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2008-03-22
Release date:2008-10-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of engineered beta-glucosidase from a soil metagenome.
Proteins, 73, 2008
3FAK
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BU of 3fak by Molmil
Structural and Functional Analysis of a Hormone-Sensitive Lipase like EstE5 from a Metagenome Library
Descriptor: CHLORIDE ION, Esterase/lipase, SODIUM ION
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2008-11-17
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional analysis of a novel EstE5 belonging to the subfamily of hormone-sensitive lipase
Biochem.Biophys.Res.Commun., 379, 2009
3DNM
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BU of 3dnm by Molmil
Crystal Structure Hormone-Sensitive Lipase from a Metagenome Library
Descriptor: BETA-MERCAPTOETHANOL, Esterase/lipase, SULFATE ION
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2008-07-02
Release date:2009-01-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional analysis of a novel hormone-sensitive lipase from a metagenome library
Proteins, 74, 2008
3FW6
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BU of 3fw6 by Molmil
Crystal structure of CelM2, a bifunctional glucanase-xylanase protein from a metagenome library
Descriptor: Cellulase, ZINC ION
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2009-01-17
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of CelM2, a bifunctional glucanase-xylanase protein from a metagenome library
Biochem.Biophys.Res.Commun., 383, 2009
8WDG
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BU of 8wdg by Molmil
Subatomic crystal structure of glucose isomerase from Streptomyces rubiginosus
Descriptor: MAGNESIUM ION, Xylitol, Xylose isomerase
Authors:Nam, K.H.
Deposit date:2023-09-15
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Xylitol binding to the M1 site of glucose isomerase induces a conformational change in the substrate binding channel.
Biochem.Biophys.Res.Commun., 682, 2023
7CVM
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BU of 7cvm by Molmil
Crystal structure of glucose isomerase by fixed-target serial synchrotron crystallography (500 ms)
Descriptor: MAGNESIUM ION, Xylose isomerase
Authors:Nam, K.H.
Deposit date:2020-08-26
Release date:2020-09-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fixed-Target Serial Synchrotron Crystallography Using Nylon Mesh and Enclosed Film-Based Sample Holder
Crystals, 10, 2020
7CVK
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BU of 7cvk by Molmil
Crystal structure of glucose isomerase by fixed-target serial synchrotron crystallography (100 ms)
Descriptor: MAGNESIUM ION, Xylose isomerase
Authors:Nam, K.H.
Deposit date:2020-08-26
Release date:2020-09-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Fixed-Target Serial Synchrotron Crystallography Using Nylon Mesh and Enclosed Film-Based Sample Holder
Crystals, 10, 2020
7CVJ
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BU of 7cvj by Molmil
Crystal structure of lysozyme by fixed-target serial synchrotron crystallography (100 ms)
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Nam, K.H.
Deposit date:2020-08-26
Release date:2020-09-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Fixed-Target Serial Synchrotron Crystallography Using Nylon Mesh and Enclosed Film-Based Sample Holder
Crystals, 10, 2020
7CVL
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BU of 7cvl by Molmil
Crystal structure of lysozyme by fixed-target serial synchrotron crystallography (500 ms)
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Nam, K.H.
Deposit date:2020-08-26
Release date:2020-09-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Fixed-Target Serial Synchrotron Crystallography Using Nylon Mesh and Enclosed Film-Based Sample Holder
Crystals, 10, 2020
7DIG
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BU of 7dig by Molmil
Green fluorescent protein from Dendronephthya sp. SSAL-2002
Descriptor: Green fluorescent protein
Authors:Nam, K.H.
Deposit date:2020-11-19
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Metal-Induced Fluorescence Quenching of Photoconvertible Fluorescent Protein DendFP.
Molecules, 27, 2022
7E5J
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BU of 7e5j by Molmil
Crystal structure of beta-glucosidase from Thermoanaerobacterium saccharolyticum
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucosidase, SODIUM ION
Authors:Nam, K.H.
Deposit date:2021-02-18
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Biochemical and Structural Analysis of a Glucose-Tolerant beta-Glucosidase from the Hemicellulose-Degrading Thermoanaerobacterium saccharolyticum.
Molecules, 27, 2022

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PDB entries from 2024-09-18

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