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8D4M
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BU of 8d4m by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) S144A Mutant in Complex with Inhibitor GC376
Descriptor: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5
Authors:Lewandowski, E.M, Hu, Y, Tan, H, Wang, J, Chen, Y.
Deposit date:2022-06-02
Release date:2022-07-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Naturally occurring mutations of SARS-CoV-2 main protease confer drug resistance to nirmatrelvir.
Biorxiv, 2022
8D4N
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BU of 8d4n by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) E166Q Mutant
Descriptor: 3C-like proteinase nsp5
Authors:Lewandowski, E.M, Hu, Y, Tan, H, Wang, J, Chen, Y.
Deposit date:2022-06-02
Release date:2022-07-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Naturally occurring mutations of SARS-CoV-2 main protease confer drug resistance to nirmatrelvir.
Biorxiv, 2022
8D4L
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BU of 8d4l by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) S144A Mutant
Descriptor: 3C-like proteinase nsp5
Authors:Lewandowski, E.M, Hu, Y, Tan, H, Wang, J, Chen, Y.
Deposit date:2022-06-02
Release date:2022-07-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Naturally occurring mutations of SARS-CoV-2 main protease confer drug resistance to nirmatrelvir.
Biorxiv, 2022
8D4K
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BU of 8d4k by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) H172Y Mutant in Complex with Inhibitor GC376
Descriptor: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5
Authors:Lewandowski, E.M, Hu, Y, Tan, H, Wang, J, Chen, Y.
Deposit date:2022-06-02
Release date:2022-07-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Naturally occurring mutations of SARS-CoV-2 main protease confer drug resistance to nirmatrelvir.
Biorxiv, 2022
3SWJ
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BU of 3swj by Molmil
Crystal structure of Campylobacter jejuni ChuZ
Descriptor: AZIDE ION, PROTOPORPHYRIN IX CONTAINING FE, Putative uncharacterized protein
Authors:Hu, Y.
Deposit date:2011-07-14
Release date:2011-11-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.409 Å)
Cite:Crystal structure of Campylobacter jejuni ChuZ: a split-barrel family heme oxygenase with a novel heme-binding mode.
Biochem.Biophys.Res.Commun., 415, 2011
2MRI
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BU of 2mri by Molmil
Solution structure of a proteasome related subunit C terminal domain
Descriptor: 26S proteasome regulatory subunit RPN9
Authors:Wu, Y, Hu, Y, Jin, C.
Deposit date:2014-07-06
Release date:2015-02-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of yeast Rpn9: insights into proteasome lid assembly.
J. Biol. Chem., 290, 2015
2MR3
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BU of 2mr3 by Molmil
A subunit of 26S proteasome lid complex
Descriptor: 26S proteasome regulatory subunit RPN9
Authors:Wu, Y, Hu, Y, Jin, C.
Deposit date:2014-06-30
Release date:2015-02-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of yeast Rpn9: insights into proteasome lid assembly.
J. Biol. Chem., 290, 2015
2MQW
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BU of 2mqw by Molmil
Solution structure of a proteasome related subunit N terminal domain
Descriptor: 26S proteasome regulatory subunit RPN9
Authors:Wu, Y, Hu, Y, Jin, C.
Deposit date:2014-06-30
Release date:2015-02-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of yeast Rpn9: insights into proteasome lid assembly.
J. Biol. Chem., 290, 2015
8GQ6
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BU of 8gq6 by Molmil
Cryo-EM Structure of the KBTBD2-CUL3-Rbx1 dimeric complex
Descriptor: Cullin-3, E3 ubiquitin-protein ligase RBX1, Kelch repeat and BTB domain-containing protein 2, ...
Authors:Sun, L, Chen, Z, Hu, Y, Mao, Q.
Deposit date:2022-08-29
Release date:2023-09-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Dynamic molecular architecture and substrate recruitment of cullin3-RING E3 ligase CRL3 KBTBD2.
Nat.Struct.Mol.Biol., 31, 2024
8DTZ
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BU of 8dtz by Molmil
Recombinant mouse RyR2 triple phosphonull mutant S2807A/S2813A/S2030A in complex with FKBP12.6 and nanodisc under closed-state conditions
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ZINC ION
Authors:Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
Deposit date:2022-07-26
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Recombinant mouse RyR2 triple phosphonull mutant S2807A/S2813A/S2030A in complex with FKBP12.6 and nanodisc under closed-state conditions
To Be Published
8DTY
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BU of 8dty by Molmil
Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under closed-state conditions
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ZINC ION
Authors:Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
Deposit date:2022-07-26
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under closed-state conditions
To Be Published
8DVV
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BU of 8dvv by Molmil
Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under open-state conditions
Descriptor: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ...
Authors:Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
Deposit date:2022-07-29
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under open-state conditions
To Be Published
4XIY
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BU of 4xiy by Molmil
Crystal structure of ketol-acid reductoisomerase from Azotobacter
Descriptor: DI(HYDROXYETHYL)ETHER, FE (III) ION, Ketol-acid reductoisomerase, ...
Authors:Spatzal, T, Cahn, J.K.B, Wiig, J.A, Einsle, O, Hu, Y, Ribbe, M.W, Arnold, F.H.
Deposit date:2015-01-07
Release date:2015-04-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Cofactor specificity motifs and the induced fit mechanism in class I ketol-acid reductoisomerases.
Biochem.J., 468, 2015
5WYO
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BU of 5wyo by Molmil
Solution structure of E.coli HdeA
Descriptor: Acid stress chaperone HdeA
Authors:Yang, C, Hu, Y, Jin, C.
Deposit date:2017-01-14
Release date:2017-11-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Characterizations of the Interactions between Escherichia coli Periplasmic Chaperone HdeA and Its Native Substrates during Acid Stress
Biochemistry, 56, 2017
7T64
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BU of 7t64 by Molmil
Rabbit RyR1 disease mutant Y523S in complex with FKBP12.6 embedded in lipidic nanodisc in the closed state
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 1, ZINC ION
Authors:Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
Deposit date:2021-12-13
Release date:2022-07-20
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Molecular mechanism of the severe MH/CCD mutation Y522S in skeletal ryanodine receptor (RyR1) by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7T65
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BU of 7t65 by Molmil
Rabbit RyR1 disease mutant Y523S in complex with FKBP12.6 embedded in lipidic nanodisc in the open state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, ...
Authors:Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
Deposit date:2021-12-13
Release date:2022-07-20
Last modified:2022-08-03
Method:ELECTRON MICROSCOPY (4.05 Å)
Cite:Molecular mechanism of the severe MH/CCD mutation Y522S in skeletal ryanodine receptor (RyR1) by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7T4J
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BU of 7t4j by Molmil
Crystal Structure of EGFR_D770_N771insNPG/V948R in complex with TAK-788
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, Epidermal growth factor receptor, ...
Authors:Skene, R.J, Lane, W, Hu, Y.
Deposit date:2021-12-10
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of mobocertinib, a potent, oral inhibitor of EGFR exon 20 insertion mutations in non-small cell lung cancer.
Bioorg.Med.Chem.Lett., 80, 2022
5B7J
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BU of 5b7j by Molmil
Structure model of Sap1-DNA complex
Descriptor: DNA (5'-D(*AP*AP*TP*AP*TP*TP*GP*TP*TP*TP*TP*G)-3'), DNA (5'-D(*CP*AP*AP*AP*AP*CP*AP*AP*TP*AP*TP*T)-3'), Switch-activating protein 1
Authors:Jin, C, Hu, Y, Ding, J, Zhang, Y.
Deposit date:2016-06-07
Release date:2017-02-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Sap1 is a replication-initiation factor essential for the assembly of pre-replicative complex in the fission yeast Schizosaccharomyces pombe
J. Biol. Chem., 292, 2017
6UG0
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BU of 6ug0 by Molmil
N2-bound Nitrogenase MoFe-protein from Azotobacter vinelandii
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
Authors:Kang, W, Hu, Y, Ribbe, M.W.
Deposit date:2019-09-25
Release date:2020-06-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural evidence for a dynamic metallocofactor during N2reduction by Mo-nitrogenase.
Science, 368, 2020
1XVA
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BU of 1xva by Molmil
METHYLTRANSFERASE
Descriptor: ACETATE ION, GLYCINE N-METHYLTRANSFERASE, S-ADENOSYLMETHIONINE
Authors:Fu, Z, Hu, Y, Konishi, K, Takata, Y, Ogawa, H, Gomi, T, Fujioka, M, Takusagawa, F.
Deposit date:1996-07-20
Release date:1997-01-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of glycine N-methyltransferase from rat liver.
Biochemistry, 35, 1996
2MYP
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BU of 2myp by Molmil
An arsenate reductase in the phosphate binding state
Descriptor: Glutaredoxin arsenate reductase
Authors:Jin, C, Yu, C, Hu, C, Hu, Y.
Deposit date:2015-01-30
Release date:2015-08-05
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A Hybrid Mechanism for the Synechocystis Arsenate Reductase Revealed by Structural Snapshots during Arsenate Reduction.
J.Biol.Chem., 290, 2015
2MYT
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BU of 2myt by Molmil
An arsenate reductase in the intermediate state
Descriptor: Glutaredoxin arsenate reductase
Authors:Jin, C, Yu, C, Hu, C, Hu, Y.
Deposit date:2015-01-30
Release date:2015-08-05
Last modified:2015-09-23
Method:SOLUTION NMR
Cite:A Hybrid Mechanism for the Synechocystis Arsenate Reductase Revealed by Structural Snapshots during Arsenate Reduction.
J.Biol.Chem., 290, 2015
2MYU
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BU of 2myu by Molmil
An arsenate reductase in oxidized state
Descriptor: Glutaredoxin arsenate reductase
Authors:Jin, C, Hu, C, Hu, Y.
Deposit date:2015-01-30
Release date:2015-08-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A Hybrid Mechanism for the Synechocystis Arsenate Reductase Revealed by Structural Snapshots during Arsenate Reduction.
J.Biol.Chem., 290, 2015
2MYN
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BU of 2myn by Molmil
An arsenate reductase in reduced state
Descriptor: Glutaredoxin arsenate reductase
Authors:Jin, C, Yu, C, Hu, C, Hu, Y.
Deposit date:2015-01-30
Release date:2015-08-05
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A Hybrid Mechanism for the Synechocystis Arsenate Reductase Revealed by Structural Snapshots during Arsenate Reduction.
J.Biol.Chem., 290, 2015
4KQZ
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BU of 4kqz by Molmil
structure of the receptor binding domain (RBD) of MERS-CoV spike
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, S protein
Authors:Lu, G, Hu, Y, Wang, Q, Qi, J, Gao, F, Li, Y, Zhang, Y, Zhang, W, Yuan, Y, Bao, J, Zhang, B, Shi, Y, Yan, J, Gao, G.F.
Deposit date:2013-05-15
Release date:2013-07-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.514 Å)
Cite:Molecular basis of binding between novel human coronavirus MERS-CoV and its receptor CD26.
Nature, 500, 2013

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