Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4P2V
DownloadVisualize
BU of 4p2v by Molmil
Structure of the AI-2 processing enzyme LsrF in complex with the product of the LsrG reaction P-HPD
Descriptor: (3R)-3-hydroxy-2,4-dioxopentyl dihydrogen phosphate, Uncharacterized aldolase LsrF
Authors:Miller, S.T, Oh, I.K, Xavier, K.B.
Deposit date:2014-03-04
Release date:2014-09-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:LsrF, a coenzyme A-dependent thiolase, catalyzes the terminal step in processing the quorum sensing signal autoinducer-2.
Proc.Natl.Acad.Sci.USA, 111, 2014
3GND
DownloadVisualize
BU of 3gnd by Molmil
Crystal Structure of E. coli LsrF in complex with Ribulose-5-phosphate
Descriptor: Aldolase lsrF, RIBULOSE-5-PHOSPHATE
Authors:Miller, S.T, Diaz, Z.C.
Deposit date:2009-03-17
Release date:2009-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of the Escherichia coli autoinducer-2 processing protein LsrF.
Plos One, 4, 2009
3GLC
DownloadVisualize
BU of 3glc by Molmil
Crystal Structure of E. coli LsrF in complex with Ribose-5-phosphate
Descriptor: Aldolase lsrF, RIBOSE-5-PHOSPHATE
Authors:Miller, S.T, Diaz, Z.C.
Deposit date:2009-03-11
Release date:2009-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of the Escherichia coli autoinducer-2 processing protein LsrF.
Plos One, 4, 2009
3GKF
DownloadVisualize
BU of 3gkf by Molmil
Crystal Structure of E. coli LsrF
Descriptor: Aldolase lsrF
Authors:Miller, S.T, Diaz, Z.C.
Deposit date:2009-03-10
Release date:2009-09-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of the Escherichia coli autoinducer-2 processing protein LsrF.
Plos One, 4, 2009
1HBX
DownloadVisualize
BU of 1hbx by Molmil
Ternary Complex of SAP-1 and SRF with specific SRE DNA
Descriptor: 5'-D(*CP*AP*CP*AP*CP*CP*GP*GP*AP*AP*GP*TP*CP* CP*TP*AP*AP*TP*TP*AP*GP*GP*CP*CP*AP*T)-3', 5'-D(*GP*AP*TP*GP*GP*CP*CP*TP*AP*AP*TP*TP*AP* GP*GP*AP*CP*TP*TP*CP*CP*GP*GP*TP*G)-3', ETS-DOMAIN PROTEIN ELK-4, ...
Authors:Hassler, M, Richmond, T.J.
Deposit date:2001-04-20
Release date:2001-06-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:The B-Box Dominates Sap-1/Srf Interactions in the Structure of the Ternary Complex
Embo J., 20, 2001
1K6O
DownloadVisualize
BU of 1k6o by Molmil
Crystal Structure of a Ternary SAP-1/SRF/c-fos SRE DNA Complex
Descriptor: 5'-D(*CP*AP*CP*AP*GP*GP*AP*TP*GP*TP*CP*CP*AP*TP*AP*TP*TP*AP*GP*GP*AP*CP*A)-3', 5'-D(*TP*GP*TP*CP*CP*TP*AP*AP*TP*AP*TP*GP*GP*AP*CP*AP*TP*CP*CP*TP*GP*TP*G)-3', ETS-domain protein ELK-4, ...
Authors:Mo, Y, Ho, W, Johnston, K, Marmorstein, R.
Deposit date:2001-10-16
Release date:2002-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Crystal structure of a ternary SAP-1/SRF/c-fos SRE DNA complex.
J.Mol.Biol., 314, 2001
1JMK
DownloadVisualize
BU of 1jmk by Molmil
Structural Basis for the Cyclization of the Lipopeptide Antibiotic Surfactin by the Thioesterase Domain SrfTE
Descriptor: SULFATE ION, Surfactin Synthetase
Authors:Bruner, S.D, Weber, T, Kohli, R.M, Schwarzer, D, Marahiel, M.A, Walsh, C.T, Stubbs, M.T.
Deposit date:2001-07-18
Release date:2002-03-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural basis for the cyclization of the lipopeptide antibiotic surfactin by the thioesterase domain SrfTE.
Structure, 10, 2002
6LQO
DownloadVisualize
BU of 6lqo by Molmil
EBV tegument protein BBRF2/BSRF1 complex
Descriptor: ACETATE ION, Cytoplasmic envelopment protein 1, GLYCEROL, ...
Authors:He, H.P, Luo, M, Cao, Y.L, Gao, S.
Deposit date:2020-01-14
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.0911262 Å)
Cite:Structure of Epstein-Barr virus tegument protein complex BBRF2-BSRF1 reveals its potential role in viral envelopment.
Nat Commun, 11, 2020
2MA8
DownloadVisualize
BU of 2ma8 by Molmil
Solution NMR Structure of Salmonella typhimurium LT2 Secreted Protein SrfN: Northeast Structural Genomics Consortium Target StR109
Descriptor: Putative secreted protein
Authors:Cort, J.R, Eletsky, A, Adkins, J.N, Burnet, M.C, Parish, D, Liu, K, Sukumaran, D.K, Jiang, M, Cunningham, K, Ma, T, Xiao, R, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-06-29
Release date:2013-09-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Functional Characterization of DUF1471 Domains of Salmonella Proteins SrfN, YdgH/SssB, and YahO.
Plos One, 9, 2014
2WNW
DownloadVisualize
BU of 2wnw by Molmil
The crystal structure of SrfJ from salmonella typhimurium
Descriptor: ACTIVATED BY TRANSCRIPTION FACTOR SSRB, GLYCEROL, PHOSPHATE ION
Authors:Kim, Y.-G, Kim, J.-H, Kim, K.-J.
Deposit date:2009-07-20
Release date:2010-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Salmonella Enterica Serovar Typhimurium Virulence Factor Srfj, a Glycoside Hydrolase Family Enzyme.
J.Bacteriol., 191, 2009
3MC3
DownloadVisualize
BU of 3mc3 by Molmil
Crystal structure of DsrE/DsrF-like family protein (NP_342589.1) from SULFOLOBUS SOLFATARICUS at 1.49 A resolution
Descriptor: CHLORIDE ION, DsrE/DsrF-like family protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-03-26
Release date:2010-05-19
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystal structure of DsrE/DsrF-like family protein (NP_342589.1) from SULFOLOBUS SOLFATARICUS at 1.49 A resolution
To be published
1SRS
DownloadVisualize
BU of 1srs by Molmil
SERUM RESPONSE FACTOR (SRF) CORE COMPLEXED WITH SPECIFIC SRE DNA
Descriptor: DNA (5'-D(*CP*CP*(5IU)P*TP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*CP*CP*AP*TP*G)-3'), DNA (5'-D(*CP*CP*AP*TP*GP*GP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*A P*AP*G)-3'), PROTEIN (SERUM RESPONSE FACTOR (SRF))
Authors:Pellegrini, L, Tan, S, Richmond, T.J.
Deposit date:1995-07-28
Release date:1995-07-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of serum response factor core bound to DNA.
Nature, 376, 1995
6FJ2
DownloadVisualize
BU of 6fj2 by Molmil
Structure of Thermolysin solved from SAD data collected at the peak of the Zn absorption edge on ID30B
Descriptor: CALCIUM ION, DIMETHYL SULFOXIDE, LYSINE, ...
Authors:McCarthy, A.A, Mueller-Dieckmann, C.
Deposit date:2018-01-19
Release date:2018-01-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:ID30B - a versatile beamline for macromolecular crystallography experiments at the ESRF.
J Synchrotron Radiat, 25, 2018
6FJ9
DownloadVisualize
BU of 6fj9 by Molmil
Structure of Thaumatin collected from an in situ crystal on ID30B at 17.5 keV.
Descriptor: L(+)-TARTARIC ACID, Thaumatin-1
Authors:McCarthy, A.A, Mueller-Dieckmann, C.
Deposit date:2018-01-21
Release date:2018-01-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:ID30B - a versatile beamline for macromolecular crystallography experiments at the ESRF.
J Synchrotron Radiat, 25, 2018
6FJ4
DownloadVisualize
BU of 6fj4 by Molmil
Structure of FAE solved by SAD from data collected at the peak of the Selenium absorption edge on ID30B
Descriptor: CADMIUM ION, Endo-1,4-beta-xylanase Y, GLYCEROL, ...
Authors:McCarthy, A.A, Mueller-Dieckmann, C.
Deposit date:2018-01-19
Release date:2018-02-07
Last modified:2018-08-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:ID30B - a versatile beamline for macromolecular crystallography experiments at the ESRF.
J Synchrotron Radiat, 25, 2018
7QGF
DownloadVisualize
BU of 7qgf by Molmil
Cubic Insulin SAD phasing at 14.2 keV
Descriptor: Insulin A chain, Insulin B chain
Authors:Nanao, M.H, Basu, S.
Deposit date:2021-12-08
Release date:2022-06-01
Method:X-RAY DIFFRACTION (1.203 Å)
Cite:ID23-2: an automated and high-performance microfocus beamline for macromolecular crystallography at the ESRF.
J.Synchrotron Radiat., 29, 2022
6FJ6
DownloadVisualize
BU of 6fj6 by Molmil
Structure of Thaumatin collected at 100K on ID30B
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin-1
Authors:McCarthy, A.A, Mueller-Dieckmann, C.
Deposit date:2018-01-20
Release date:2018-02-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:ID30B - a versatile beamline for macromolecular crystallography experiments at the ESRF.
J Synchrotron Radiat, 25, 2018
6FID
DownloadVisualize
BU of 6fid by Molmil
Bovine trypsin solved by S-SAD on ID30B
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:McCarthy, A.A, Mueller-Dieckmann, C.
Deposit date:2018-01-18
Release date:2018-02-07
Last modified:2018-08-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:ID30B - a versatile beamline for macromolecular crystallography experiments at the ESRF.
J Synchrotron Radiat, 25, 2018
6FJ8
DownloadVisualize
BU of 6fj8 by Molmil
Structure of Thaumatin collected from an in situ crystal collected on ID30B at 12.7 keV.
Descriptor: L(+)-TARTARIC ACID, Thaumatin-1
Authors:McCarthy, A.A, Mueller-Dieckmann, C.
Deposit date:2018-01-21
Release date:2018-01-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:ID30B - a versatile beamline for macromolecular crystallography experiments at the ESRF.
J Synchrotron Radiat, 25, 2018
2VSQ
DownloadVisualize
BU of 2vsq by Molmil
Structure of surfactin A synthetase C (SrfA-C), a nonribosomal peptide synthetase termination module
Descriptor: LEUCINE, SULFATE ION, SURFACTIN SYNTHETASE SUBUNIT 3
Authors:Tanovic, A, Samel, S.A, Essen, L.-O, Marahiel, M.A.
Deposit date:2008-04-29
Release date:2008-07-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the termination module of a nonribosomal peptide synthetase.
Science, 321, 2008
6LQN
DownloadVisualize
BU of 6lqn by Molmil
EBV tegument protein BBRF2
Descriptor: Cytoplasmic envelopment protein 1, NITRATE ION, SULFATE ION
Authors:He, H.P, Luo, M, Cao, Y.L, Gao, S.
Deposit date:2020-01-14
Release date:2020-10-07
Last modified:2021-04-21
Method:X-RAY DIFFRACTION (1.600022 Å)
Cite:Structure of Epstein-Barr virus tegument protein complex BBRF2-BSRF1 reveals its potential role in viral envelopment.
Nat Commun, 11, 2020
2M2J
DownloadVisualize
BU of 2m2j by Molmil
Solution NMR structure of the N-terminal domain of STM1478 from Salmonella typhimurium LT2: Target STR147A of the Northeast Structural Genomics consortium (NESG), and APC101565 of the Midwest Center for Structural Genomics (MCSG).
Descriptor: Putative periplasmic protein
Authors:Houliston, S, Yee, A, Lemak, A, Garcia, M, Wu, B, Savchenko, A, Montelione, G.T, Arrowsmith, C, Northeast Structural Genomics Consortium (NESG), Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-12-21
Release date:2013-05-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Functional Characterization of DUF1471 Domains of Salmonella Proteins SrfN, YdgH/SssB, and YahO.
Plos One, 9, 2014
2MA4
DownloadVisualize
BU of 2ma4 by Molmil
Solution NMR Structure of yahO protein from Salmonella typhimurium, Northeast Structural Genomics Consortium (NESG) Target StR106
Descriptor: Putative periplasmic protein
Authors:Eletsky, A, Zhang, Q, Liu, G, Wang, H, Nwosu, C, Cunningham, K, Ma, L, Xiao, R, Liu, J, Baran, M.C, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-06-27
Release date:2013-08-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Functional Characterization of DUF1471 Domains of Salmonella Proteins SrfN, YdgH/SssB, and YahO.
Plos One, 9, 2014
3CFA
DownloadVisualize
BU of 3cfa by Molmil
Anemonia sulcata red fluorescent protein asRFP
Descriptor: GFP-like fluorescent protein
Authors:Kachalova, G.S, Gundel, S, Wiedenmann, J, Bartunik, H.D.
Deposit date:2008-03-03
Release date:2009-03-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of Anemonia sulcata red fluorescent protein asRFP
To be Published
3CFF
DownloadVisualize
BU of 3cff by Molmil
Photoswitchable red fluorescent protein psRFP, on-state
Descriptor: GFP-like photoswitchable fluorescent protein
Authors:Kachalova, G.S, Gundel, S, Bartunik, H.D, Wiedenmann, J.
Deposit date:2008-03-03
Release date:2009-03-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Anemonia sulcata red fluorescent protein asRFP
To be Published

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon