1CS9
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SOLUTION STRUCTURE OF CGGIRGERA IN CONTACT WITH THE MONOCLONAL ANTIBODY MAB 4X11, NMR, 7 STRUCTURES
Descriptor:HISTONE H3 PEPTIDE
Authors:Phan Chan Du, A., Petit, M.C., Guichard, G., Briand, J.P., Muller, S., Cung, M.T.
Deposit date:1999-08-18
Release date:1999-09-02
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Structure of antibody-bound peptides and retro-inverso analogues. A transferred nuclear Overhauser effect spectroscopy and molecular dynamics approach.
Biochemistry, 40, 2001
1CT6
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SOLUTION STRUCTURE OF CGGIRGERG IN CONTACT WITH THE MONOCLONAL ANTIBODY MAB 4X11, NMR, 11 STRUCTURES
Descriptor:HISTONE H3 PEPTIDE
Authors:Phan Chan Du, A., Petit, M.C., Guichard, G., Briand, J.P., Muller, S., Cung, M.T.
Deposit date:1999-08-19
Release date:1999-09-02
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Structure of antibody-bound peptides and retro-inverso analogues. A transferred nuclear Overhauser effect spectroscopy and molecular dynamics approach.
Biochemistry, 40, 2001
1Q9C
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CRYSTAL STRUCTURE OF THE HISTONE DOMAIN OF SON OF SEVENLESS
Descriptor:Son of sevenless protein homolog 1
Authors:Sondermann, H., Soisson, S.M., Bar-Sagi, D., Kuriyan, J.
Deposit date:2003-08-24
Release date:2003-12-09
Modification date:2009-02-24
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Tandem Histone Folds in the Structure of the N-terminal Segment of the Ras Activator Son of Sevenless
Structure, 11, 2003
2JMJ
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NMR SOLUTION STRUCTURE OF THE PHD DOMAIN FROM THE YEAST YNG1 PROTEIN IN COMPLEX WITH H3(1-9)K4ME3 PEPTIDE
Descriptor:Protein YNG1, Histone H3
Authors:Ilin, S., Taverna, S.D., Rogers, R.S., Tanny, J.C., Lavender, H., Li, H., Baker, L., Boyle, J., Blair, L.P., Chait, B.T., Patel, D.J., Aitchison, J.D., Tackett, A.J., Allis, C.D.
Deposit date:2006-11-15
Release date:2007-07-03
Modification date:2009-02-24
Method:SOLUTION NMR
Cite:Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs
Mol.Cell, 24, 2006
2LBM
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SOLUTION STRUCTURE OF THE ADD DOMAIN OF ATRX COMPLEXED WITH HISTONE TAIL H3 1-15 K9ME3
Descriptor:Transcriptional regulator ATRX (E.C.3.6.4.12), histone tail H3 K9me3
Authors:Eustermann, S., Yang, J., Neuhaus, D.
Deposit date:2011-04-08
Release date:2011-06-29
Method:SOLUTION NMR
Cite:Combinatorial readout of histone H3 modifications specifies localization of ATRX to heterochromatin
Nat.Struct.Mol.Biol., 2011
2LY8
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THE BUDDING YEAST CHAPERONE SCM3 RECOGNIZES THE PARTIALLY UNFOLDED DIMER OF THE CENTROMERE-SPECIFIC CSE4/H4 HISTONE VARIANT
Descriptor:Budding yeast chaperone Scm3
Authors:Hong, J., Feng, H., Zhou, Z., Ghirlando, R., Bai, Y.
Deposit date:2012-09-13
Release date:2012-12-12
Modification date:2013-04-03
Method:SOLUTION NMR
Cite:Identification of Functionally Conserved Regions in the Structure of the Chaperone/CenH3/H4 Complex.
J.Mol.Biol., 425, 2013
2M0O
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THE SOLUTION STRUCTURE OF HUMAN PHF1 IN COMPLEX WITH H3K36ME3
Descriptor:PHD finger protein 1, H3K36me3 peptide
Authors:Song, J., Patel, D.J.
Deposit date:2012-10-30
Release date:2013-01-16
Modification date:2013-02-27
Method:SOLUTION NMR
Cite:An H3K36 Methylation-Engaging Tudor Motif of Polycomb-like Proteins Mediates PRC2 Complex Targeting.
Mol.Cell, 49, 2013
3A1B
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CRYSTAL STRUCTURE OF THE DNMT3A ADD DOMAIN IN COMPLEX WITH HISTONE H3
Descriptor:DNA (cytosine-5)-methyltransferase 3A, Histone H3.1 (E.C.2.1.1.37)
Authors:Otani, J., Arita, K., Ariyoshi, M., Shirakawa, M.
Deposit date:2009-03-28
Release date:2009-11-10
Modification date:2011-07-13
Method:X-RAY DIFFRACTION (2.292 Å)
Cite:Structural basis for recognition of H3K4 methylation status by the DNA methyltransferase 3A ATRX-DNMT3-DNMT3L domain
Embo Rep., 10, 2009
3GL6
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CRYSTAL STRUCTURE OF JARID1A-PHD3 COMPLEXED WITH H3(1-9)K4ME3 PEPTIDE
Descriptor:Histone demethylase JARID1A (E.C.1.14.11.-), H3(1-9)K4me3 peptide
Authors:Wang, Z., Song, J., Patel, D.J.
Deposit date:2009-03-11
Release date:2009-05-05
Modification date:2009-11-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Haematopoietic malignancies caused by dysregulation of a chromatin-binding PHD finger.
Nature, 459, 2009
3QL9
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MONOCLINIC COMPLEX STRUCTURE OF ATRX ADD BOUND TO HISTONE H3K9ME3 PEPTIDE
Descriptor:Transcriptional regulator ATRX (E.C.3.6.4.12), peptide of Histone H3.3
Authors:Xiang, B., Li, H.
Deposit date:2011-02-02
Release date:2011-06-15
Modification date:2014-03-05
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:ATRX ADD domain links an atypical histone methylation recognition mechanism to human mental-retardation syndrome
Nat.Struct.Mol.Biol., 18, 2011
3QLA
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HEXAGONAL COMPLEX STRUCTURE OF ATRX ADD BOUND TO H3K9ME3 PEPTIDE
Descriptor:Transcriptional regulator ATRX (E.C.3.6.4.12), peptide of Histone H3.3
Authors:Xiang, B., Li, H.
Deposit date:2011-02-02
Release date:2011-06-15
Modification date:2014-03-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:ATRX ADD domain links an atypical histone methylation recognition mechanism to human mental-retardation syndrome
Nat.Struct.Mol.Biol., 18, 2011
3QLC
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COMPLEX STRUCTURE OF ATRX ADD DOMAIN BOUND TO UNMODIFIED H3 1-15 PEPTIDE
Descriptor:Transcriptional regulator ATRX (E.C.3.6.4.12), peptide of Histone H3.3
Authors:Li, H., Patel, D.J.
Deposit date:2011-02-02
Release date:2011-06-15
Modification date:2014-03-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:ATRX ADD domain links an atypical histone methylation recognition mechanism to human mental-retardation syndrome
Nat.Struct.Mol.Biol., 18, 2011
4BD3
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PHF19 LINKS METHYLATED LYSINE 36 OF HISTONE H3 TO REGULATION OF POLYCOMB ACTIVITY
Descriptor:PHD FINGER PROTEIN 19, HISTONE H3
Authors:Lapinaite, A., Simon, B., Carlomagno, T.
Deposit date:2012-10-04
Release date:2012-10-31
Modification date:2012-12-19
Method:SOLUTION NMR
Cite:Phf19 Links Methylated Lys36 of Histone H3 to Regulation of Polycomb Activity
Nat.Struct.Mol.Biol., 19, 2012
4GNE
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CRYSTAL STRUCTURE OF NSD3 TANDEM PHD5-C5HCH DOMAINS COMPLEXED WITH H3 PEPTIDE 1-7
Descriptor:Histone-lysine N-methyltransferase NSD3 (E.C.2.1.1.43), Histone H3.3
Authors:Li, F., He, C., Wu, J., Shi, Y.
Deposit date:2012-08-17
Release date:2013-01-02
Modification date:2013-09-04
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:The methyltransferase NSD3 has chromatin-binding motifs, PHD5-C5HCH, that are distinct from other NSD (nuclear receptor SET domain) family members in their histone H3 recognition.
J.Biol.Chem., 288, 2013
4GNF
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CRYSTAL STRUCTURE OF NSD3 TANDEM PHD5-C5HCH DOMAINS COMPLEXED WITH H3 PEPTIDE 1-15
Descriptor:Histone-lysine N-methyltransferase NSD3 (E.C.2.1.1.43), Histone H3.3
Authors:Li, F., He, C., Wu, J., Shi, Y.
Deposit date:2012-08-17
Release date:2013-01-02
Modification date:2013-09-04
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The methyltransferase NSD3 has chromatin-binding motifs, PHD5-C5HCH, that are distinct from other NSD (nuclear receptor SET domain) family members in their histone H3 recognition.
J.Biol.Chem., 288, 2013
4GNG
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CRYSTAL STRUCTURE OF NSD3 TANDEM PHD5-C5HCH DOMAINS COMPLEXED WITH H3K9ME3 PEPTIDE
Descriptor:Histone-lysine N-methyltransferase NSD3 (E.C.2.1.1.43), Histone H3.3
Authors:Li, F., He, C., Wu, J., Shi, Y.
Deposit date:2012-08-17
Release date:2013-01-02
Modification date:2013-09-04
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The methyltransferase NSD3 has chromatin-binding motifs, PHD5-C5HCH, that are distinct from other NSD (nuclear receptor SET domain) family members in their histone H3 recognition.
J.Biol.Chem., 288, 2013
4HCZ
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PHF1 TUDOR IN COMPLEX WITH H3K36ME3
Descriptor:PHD finger protein 1, H3L-like histone
Authors:Musselman, C.A., Roy, S., Nunez, J., Kutateladze, T.G.
Deposit date:2012-10-01
Release date:2012-11-14
Modification date:2012-12-19
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Molecular basis for H3K36me3 recognition by the Tudor domain of PHF1.
Nat.Struct.Mol.Biol., 19, 2012
4QBQ
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CRYSTAL STRUCTURE OF DNMT3A ADD DOMAIN BOUND TO H3 PEPTIDE
Descriptor:DNA (cytosine-5)-methyltransferase 3A (E.C.2.1.1.37), Histone H3
Authors:Li, H., Patel, D.J.
Deposit date:2014-05-08
Release date:2015-05-13
Method:X-RAY DIFFRACTION (2.406 Å)
Cite:Engineering of a histone-recognition domain in a de novo DNA methyltransferase alters the epigenetic landscape of ESCs
To be Published
4QBR
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CRYSTAL STRUCTURE OF DNMT3A ADD DOMAIN G550D MUTANT BOUND TO H3 PEPTIDE
Descriptor:DNA (cytosine-5)-methyltransferase 3A (E.C.2.1.1.37), Histone H3
Authors:Wang, H., Li, H.
Deposit date:2014-05-08
Release date:2015-05-13
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Engineering of a histone-recognition domain in a de novo DNA methyltransferase alters the epigenetic landscape of ESCs
To be Published
4QBS
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CRYSTAL STRUCTURE OF DNMT3A ADD DOMAIN E545R MUTANT BOUND TO H3T3PH PEPTIDE
Descriptor:DNA (cytosine-5)-methyltransferase 3A (E.C.2.1.1.37), Histone H3
Authors:Wang, H., Li, H.
Deposit date:2014-05-08
Release date:2015-05-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Engineering of a histone-recognition domain in a de novo DNA methyltransferase alters the epigenetic landscape of ESCs
To be Published
4W5A
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COMPLEX STRUCTURE OF ATRX ADD BOUND TO H3K9ME3S10PH PEPTIDE
Descriptor:Transcriptional regulator ATRX (E.C.3.6.4.12), Peptide from Histone H3.3
Authors:Zhao, D., Xiang, B., Li, H.
Deposit date:2014-08-17
Release date:2015-01-21
Modification date:2015-06-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:ATRX tolerates activity-dependent histone H3 methyl/phos switching to maintain repetitive element silencing in neurons
Proc.Natl.Acad.Sci.USA, 112, 2015
4YHP
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CRYSTAL STRUCTURE OF 309M3-B FAB IN COMPLEX WITH H3K9ME3 PEPTIDE
Descriptor:H3K9me3 peptide, Fab Heavy Chain , Fab Light Chain
Authors:Hattori, T., Dementieva, I.S., Montano, S.P., Koide, S.
Deposit date:2015-02-27
Release date:2016-02-10
Modification date:2016-03-02
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation.
Proc.Natl.Acad.Sci.USA, 113, 2016
4YHZ
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CRYSTAL STRUCTURE OF 304M3-B FAB IN COMPLEX WITH H3K4ME3 PEPTIDE
Descriptor:Fab Heavy Chain, Fab Light Chain, H3K4me3 peptide
Authors:Hattori, T., Dementieva, I.S., Montano, S.P., Koide, S.
Deposit date:2015-02-27
Release date:2016-02-10
Modification date:2016-03-02
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation.
Proc.Natl.Acad.Sci.USA, 113, 2016
5C11
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CRYSTAL STRUCTURE OF JARID1A PHD FINGER BOUND TO HISTONE H3C4ME3 PEPTIDE
Descriptor:Lysine-specific demethylase 5A (E.C.1.14.11.-), H3 peptide
Authors:Huang, J., Li, H.
Deposit date:2015-06-12
Release date:2015-11-25
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Crystal Structure of Jarid1a PHD finger bound to histone H3C4me3 peptide
Nat Commun, 2015
5D6Y
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CRYSTAL STRUCTURE OF DOUBLE TUDOR DOMAIN OF HUMAN LYSINE DEMETHYLASE KDM4A COMPLEXED WITH HISTONE H3K23ME3
Descriptor:Lysine-specific demethylase 4A (E.C.1.14.11.-), peptide H3K23me3 (19-28)
Authors:Wang, F., Su, Z., Miller, M.D., Denu, J.M., Phillips Jr., G.N., Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-08-13
Release date:2016-02-10
Method:X-RAY DIFFRACTION (2.287 Å)
Cite:Crystal structure of double tudor domain of human lysine demethylase KDM4A complexed with histone H3K23me3
To Be Published
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