Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4LD9
DownloadVisualize
BU of 4ld9 by Molmil
Crystal structure of the N-terminally acetylated BAH domain of Sir3 bound to the nucleosome core particle
Descriptor: Histone H2A, Histone H2B 1.1, Histone H3.2, ...
Authors:Arnaudo, N, Fernandez, I.S, McLaughlin, S.H, Peak-Chew, S.Y, Rhodes, D, Martino, F.
Deposit date:2013-06-24
Release date:2013-08-14
Last modified:2013-09-18
Method:X-RAY DIFFRACTION (3.306 Å)
Cite:The N-terminal acetylation of Sir3 stabilizes its binding to the nucleosome core particle.
Nat.Struct.Mol.Biol., 20, 2013
1P3L
DownloadVisualize
BU of 1p3l by Molmil
Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
Descriptor: Histone H2A, Histone H2B, Histone H3, ...
Authors:Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K.
Deposit date:2003-04-17
Release date:2004-02-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions
EMBO J., 23, 2004
1P3A
DownloadVisualize
BU of 1p3a by Molmil
Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
Descriptor: Histone H2A, Histone H2B, Histone H3, ...
Authors:Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K.
Deposit date:2003-04-17
Release date:2004-02-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions
EMBO J., 23, 2004
1P3F
DownloadVisualize
BU of 1p3f by Molmil
Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
Descriptor: Histone H2A, Histone H2B, Histone H3, ...
Authors:Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K.
Deposit date:2003-04-17
Release date:2004-02-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions
EMBO J., 23, 2004
1P3B
DownloadVisualize
BU of 1p3b by Molmil
Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
Descriptor: Histone H2A, Histone H2B, Histone H3, ...
Authors:Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K.
Deposit date:2003-04-17
Release date:2004-02-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions
EMBO J., 23, 2004
1P3O
DownloadVisualize
BU of 1p3o by Molmil
Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
Descriptor: Histone H2A, Histone H2B, Histone H3, ...
Authors:Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K.
Deposit date:2003-04-17
Release date:2004-02-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions
EMBO J., 23, 2004
1P3I
DownloadVisualize
BU of 1p3i by Molmil
Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
Descriptor: Histone H2A, Histone H2B, Histone H3, ...
Authors:Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K.
Deposit date:2003-04-17
Release date:2004-02-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions
EMBO J., 23, 2004
1P3M
DownloadVisualize
BU of 1p3m by Molmil
Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
Descriptor: Histone H2A, Histone H2B, Histone H3, ...
Authors:Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K.
Deposit date:2003-04-17
Release date:2004-02-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions
EMBO J., 23, 2004
1P3P
DownloadVisualize
BU of 1p3p by Molmil
Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
Descriptor: Histone H2A, Histone H2B, Histone H3, ...
Authors:Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K.
Deposit date:2003-04-17
Release date:2004-02-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions
EMBO J., 23, 2004
1P3G
DownloadVisualize
BU of 1p3g by Molmil
Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
Descriptor: Histone H2A, Histone H2B, Histone H3, ...
Authors:Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K.
Deposit date:2003-04-17
Release date:2004-02-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions
EMBO J., 23, 2004
1M1A
DownloadVisualize
BU of 1m1a by Molmil
LIGAND BINDING ALTERS THE STRUCTURE AND DYNAMICS OF NUCLEOSOMAL DNA
Descriptor: 3-AMINO-(DIMETHYLPROPYLAMINE), 4-AMINO-(1-METHYLIMIDAZOLE)-2-CARBOXYLIC ACID, 4-AMINO-(1-METHYLPYRROLE)-2-CARBOXYLIC ACID, ...
Authors:Suto, R.K, Edayathumangalam, R.S, White, C.L, Melander, C, Gottesfeld, J.M, Dervan, P.B, Luger, K.
Deposit date:2002-06-18
Release date:2003-02-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structures of Nucleosome Core Particles in Complex with Minor Groove DNA-binding Ligands
J.MOL.BIOL., 326, 2003
1P3K
DownloadVisualize
BU of 1p3k by Molmil
Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
Descriptor: Histone H2A, Histone H2B, Histone H3, ...
Authors:Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K.
Deposit date:2003-04-17
Release date:2004-02-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions
EMBO J., 23, 2004
1P34
DownloadVisualize
BU of 1p34 by Molmil
Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
Descriptor: Histone H2A, Histone H2B, Histone H3, ...
Authors:Muthurajan, U.M, Bao, Y, Forsberg, L.J, Edayathumangalam, R.S, Dyer, P.N, White, C.L, Luger, K.
Deposit date:2003-04-17
Release date:2004-02-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of histone Sin mutant nucleosomes reveal altered protein-DNA interactions
EMBO J., 23, 2004
1N1J
DownloadVisualize
BU of 1n1j by Molmil
Crystal structure of the NF-YB/NF-YC histone pair
Descriptor: NF-YB, NF-YC
Authors:Romier, C, Cocchiarella, F, Mantovani, R, Moras, D.
Deposit date:2002-10-18
Release date:2003-02-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The NF-YB/NF-YC structure gives insight into DNA binding and transcription regulation by CCAAT factor NF-Y
J.Biol.Chem., 278, 2003
6W4L
DownloadVisualize
BU of 6w4l by Molmil
The crystal structure of a single chain H2B-H2A histone chimera from Xenopus laevis
Descriptor: Histone H2B 1.1,Histone H2A type 1, PYROPHOSPHATE
Authors:Warren, C, Bonanno, J.B, Almo, S.C, Shechter, D.
Deposit date:2020-03-11
Release date:2020-05-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structure of a single-chain H2A/H2B dimer.
Acta Crystallogr.,Sect.F, 76, 2020
6W5N
DownloadVisualize
BU of 6w5n by Molmil
Cryo-EM structure of MLL1 in complex with RbBP5, WDR5, SET1, and ASH2L bound to the nucleosome (Class05)
Descriptor: DNA (147-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Park, S.H, Lee, Y.T, Ayoub, A, Dou, Y, Cho, U.
Deposit date:2020-03-13
Release date:2021-03-31
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Mechanism for DPY30 and ASH2L intrinsically disordered regions to modulate the MLL/SET1 activity on chromatin.
Nat Commun, 12, 2021
6W5I
DownloadVisualize
BU of 6w5i by Molmil
Cryo-EM structure of MLL1 in complex with RbBP5, WDR5, SET1, and ASH2L bound to the nucleosome (Class01)
Descriptor: DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Park, S.H, Lee, Y.T, Ayoub, A, Dou, Y, Cho, U.
Deposit date:2020-03-13
Release date:2021-03-31
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Mechanism for DPY30 and ASH2L intrinsically disordered regions to modulate the MLL/SET1 activity on chromatin.
Nat Commun, 12, 2021
6W5M
DownloadVisualize
BU of 6w5m by Molmil
Cryo-EM structure of MLL1 in complex with RbBP5, WDR5, SET1, and ASH2L bound to the nucleosome (Class02)
Descriptor: DNA (147-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Park, S.H, Lee, Y.T, Ayoub, A, Dou, Y, Cho, U.
Deposit date:2020-03-13
Release date:2021-03-31
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Mechanism for DPY30 and ASH2L intrinsically disordered regions to modulate the MLL/SET1 activity on chromatin.
Nat Commun, 12, 2021
6WKR
DownloadVisualize
BU of 6wkr by Molmil
PRC2-AEBP2-JARID2 bound to H2AK119ub1 nucleosome
Descriptor: DNA (314-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Kasinath, V, Nogales, E, Beck, C, Sauer, P, Poepsel, S, Kosmatka, J, Faini, M, Toso, D, Aebersold, R.
Deposit date:2020-04-16
Release date:2021-02-03
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:JARID2 and AEBP2 regulate PRC2 in the presence of H2AK119ub1 and other histone modifications.
Science, 371, 2021
6X5A
DownloadVisualize
BU of 6x5a by Molmil
The mouse cGAS catalytic domain binding to human nucleosome that purified from HEK293T cells
Descriptor: Cyclic GMP-AMP synthase, DNA (natural), Histone H2A type 1, ...
Authors:Pengbiao, X, Pingwei, L, Baoyu, Z.
Deposit date:2020-05-25
Release date:2020-09-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.36 Å)
Cite:The molecular basis of tight nuclear tethering and inactivation of cGAS.
Nature, 587, 2020
6WZ9
DownloadVisualize
BU of 6wz9 by Molmil
Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
Descriptor: DNA, Histone H2A, Histone H2B 1.1, ...
Authors:Halic, M, Bilokapic, S.
Deposit date:2020-05-13
Release date:2020-09-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Bridging of DNA breaks activates PARP2-HPF1 to modify chromatin.
Nature, 585, 2020
6WZ5
DownloadVisualize
BU of 6wz5 by Molmil
Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
Descriptor: DNA (153-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Halic, M, Bilokapic, S.
Deposit date:2020-05-13
Release date:2020-09-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Bridging of DNA breaks activates PARP2-HPF1 to modify chromatin.
Nature, 585, 2020
6X59
DownloadVisualize
BU of 6x59 by Molmil
The mouse cGAS catalytic domain binding to human assembled nucleosome
Descriptor: Cyclic GMP-AMP synthase, DNA, Histone H2A type 1, ...
Authors:Pengbiao, X, Pingwei, L, Baoyu, Z.
Deposit date:2020-05-25
Release date:2020-09-16
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:The molecular basis of tight nuclear tethering and inactivation of cGAS.
Nature, 587, 2020
6X0N
DownloadVisualize
BU of 6x0n by Molmil
Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
Descriptor: DNA (167-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Halic, M, Bilokapic, S.
Deposit date:2020-05-16
Release date:2020-09-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Bridging of DNA breaks activates PARP2-HPF1 to modify chromatin.
Nature, 585, 2020
6XWS
DownloadVisualize
BU of 6xws by Molmil
Crystal Structure of Drosophila CAL1 1-160 bound to CENP-A/H4
Descriptor: Chromosome alignment defect 1,Chromosome alignment defect 1, Histone H3-like centromeric protein cid, Histone H4
Authors:Jeyaprakash, A.A, Medina-Pritchard, B, Lazou, V, Zou, J, Byron, O, Abad, M.A, Rappsilber, J, Heun, P.
Deposit date:2020-01-24
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (4.36 Å)
Cite:Structural basis for centromere maintenance by Drosophila CENP-A chaperone CAL1.
Embo J., 39, 2020

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon