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PDBj stands for the Protein Data Bank Japan. From the PDBj website, one can access macromolecular structures, deposit experimental data, and also make use of a variety of structural bioinformatics web services. PDBj is a member of the Worldwide PDB.

PDBj's services are mostly based on the XML (extensible markup language) files called PDBML and PDBMLplus (see also Data Format ).

In PDBj, following service are available.

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    • SEALA (SEquence ALignment Analyzer)
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    • CRNPRED (Structure prediction service based on the sequence)
    • Spanner (Structure prediction service using structure known molecules with similar sequence)
    • SFAS (Multiple service both sequence alignment and structure prediction)
  • Derived database
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    • ProMode Elastic (Database of normal mode analysis of PDB data)
  • Educational Service
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2012-07-13 (last edited: 3 months ago)2014-08-12
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