[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 58 items for (author: sharif & h)

EMDB-33200:
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-ordered form)

EMDB-33201:
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-disordered form)

EMDB-33298:
Cryo-EM map of apo-DNMT1 (aa:351-1616)

EMDB-33299:
Cryo-EM map of DNMT1 (aa:351-1616) in complex with ubiquitinated H3

PDB-7xi9:
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-ordered form)

PDB-7xib:
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-disordered form)

EMDB-12512:
cAMP-free rabbit HCN4 stabilized in LMNG-CHS detergent mixture

EMDB-12513:
cAMP-bound rabbit HCN4 stabilized in LMNG-CHS detergent mixture

PDB-7np3:
cAMP-free rabbit HCN4 stabilized in LMNG-CHS detergent mixture

PDB-7np4:
cAMP-bound rabbit HCN4 stabilized in LMNG-CHS detergent mixture

EMDB-12466:
Rabbit HCN4 stabilised in amphipol A8-35

PDB-7nmn:
Rabbit HCN4 stabilised in amphipol A8-35

EMDB-22367:
Human DPP9-CARD8 complex

PDB-7jkq:
Human DPP9-CARD8 complex

EMDB-22402:
Human DPP9-CARD8 complex

EMDB-22974:
Structure of DPP9 bound to catalytically-inactive CARD8 (S297A)

PDB-7jn7:
Human DPP9-CARD8 complex

EMDB-22074:
Cryo-EM structure of NLRP1-DPP9 complex

EMDB-22075:
Cryo-EM structure of NLRP1-DPP9-VbP complex

PDB-6x6a:
Cryo-EM structure of NLRP1-DPP9 complex

PDB-6x6c:
Cryo-EM structure of NLRP1-DPP9-VbP complex

EMDB-22452:
Adeno-Associated Virus Helicase domain Heptamer with ssDNA

EMDB-22455:
Adeno-Associated Virus 2 Rep68 HD Hexamer-ssDNA with ATPgS

PDB-7jsf:
Adeno-Associated Virus Helicase domain Heptamer with ssDNA

PDB-7jsi:
Adeno-Associated Virus 2 Rep68 HD Hexamer-ssDNA with ATPgS

EMDB-21382:
Negative stain EM map of an MTA-HDAC-MBD complex

EMDB-22233:
Cryo-EM structure of ASC-Caspase1 Octamer

EMDB-22451:
Adeno-Associated Virus Origin Binding Domain in complex with ssDNA

EMDB-22453:
Adeno-Associated Virus 2 Rep68 HD Hexamer-ssDNA with ATPgS

EMDB-22454:
Adeno-Associated Virus 2 Rep68 HD Heptamer-ssAAVS1 with ATPgS

PDB-7jse:
Adeno-Associated Virus Origin Binding Domain in complex with ssDNA

PDB-7jsg:
Adeno-Associated Virus 2 Rep68 HD-Heptamer-ssDNA with ATPgS

PDB-7jsh:
Adeno-Associated Virus 2 Rep68 HD Heptamer-ssAAVS1 with ATPgS

EMDB-22895:
Low resolution map of the nucleosome remodelling and deacetylase complex from MEL cells.

EMDB-22904:
Low resolution map of the nucleosome deacetylase complex from murine erythroleukemia cells.

EMDB-22905:
Map of the nucleosome deacetylase complex in a twisted conformation

EMDB-22906:
The untwisted conformation of the nucleosome deacetylase complex

EMDB-22219:
Cryo-EM structure of CARD8-CARD filament

EMDB-22220:
Cryo-EM structure of the NLRP1-CARD filament

PDB-6xkj:
Cryo-EM structure of CARD8-CARD filament

PDB-6xkk:
Cryo-EM structure of the NLRP1-CARD filament

PDB-7keu:
Cryo-EM structure of the Caspase-1-CARD:ASC-CARD octamer

EMDB-0541:
Structure of a MAPK pathway complex

EMDB-20550:
Structure of a MAPK pathway complex

EMDB-20551:
Structure of a MAPK pathway complex

EMDB-20552:
Structure of a MAPK pathway complex

PDB-6nyb:
Structure of a MAPK pathway complex

PDB-6q0j:
Structure of a MAPK pathway complex

PDB-6q0k:
Structure of a MAPK pathway complex

PDB-6q0t:
Structure of a MAPK pathway complex

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more