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Showing all 49 items for (author: kostyuchenko, & v.a.)
PDB-7dwt:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 1 particle)
Method: single particle / : Fibriansah G, Ng TS, Kostyuchenko VA, Shi J, Lok SM
PDB-7dwu:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 2 particle)
Method: single particle / : Fibriansah G, Ng TS, Kostyuchenko VA, Shi J, Lok SM
PDB-7cvy:
Cryo-EM structure of Chikungunya virus in complex with Fab fragments of mAb CHK-124
Method: single particle / : Zhou QF, Fox JM, Earnest JT, Ng TS, Kim AS, Fibriansah G, Kostyuchenko VA, Shu B, Diamond MS, Lok SM
PDB-7cvz:
Cryo-EM structure of Chikungunya virus in complex with Fab fragments of mAb CHK-263
Method: single particle / : Zhou QF, Fox JM, Earnest JT, Ng TS, Kim AS, Fibriansah G, Kostyuchenko VA, Shu B, Diamond MS, Lok SM
PDB-7cw0:
Cryo-EM structure of Chikungunya virus in complex with mAb CHK-263 IgG
Method: single particle / : Zhou QF, Fox JM, Earnest JT, Ng TS, Kim AS, Fibriansah G, Kostyuchenko VA, Shu B, Diamond MS, Lok SM
PDB-7cw2:
Cryo-EM structure of Chikungunya virus in complex with Fab fragments of mAb CHK-263 (subregion around icosahedral 5-fold vertex)
Method: single particle / : Zhou QF, Fox JM, Earnest JT, Ng TS, Kim AS, Fibriansah G, Kostyuchenko VA, Shu B, Diamond MS, Lok SM
PDB-7cw3:
Cryo-EM structure of Chikungunya virus in complex with mAb CHK-263 IgG (subregion around icosahedral 2-fold vertex)
Method: single particle / : Zhou QF, Fox JM, Earnest JT, Ng TS, Kim AS, Fibriansah G, Kostyuchenko VA, Shu B, Diamond MS, Lok SM
PDB-7c2s:
Helical reconstruction of Dengue virus serotype 3 complexed with Fab C10
Method: helical / : Morrone S, Chew SV, Lim XN, Ng TS, Kostyuchenko VA, Zhang S, Lok SM
PDB-7c2t:
Helical reconstruction of Zika virus complexed with Fab C10
Method: helical / : Morrone S, Chew SV, Lim XN, Ng TS, Kostyuchenko VA, Zhang S, Lok SM
PDB-7bu8:
Cryo-EM structure of zika virus complexed with Fab SIgN-3C at pH 6.5
Method: single particle / : Zhang S, Chew SV, Lim XN, Ng TS, Kostyuchenko VA, Lok SM
PDB-7bua:
Cryo-EM structure of zika virus complexed with Fab SIgN-3C at pH 8.0
Method: single particle / : Zhang S, Chew SV, Lim XN, Ng TS, Kostyuchenko VA, Lok SM
PDB-7bub:
Cryo-EM structure of Dengue virus serotype 2 complexed with Fab SIgN-3C at pH 6.5
Method: single particle / : Zhang S, Chew SV, Lim XN, Ng TS, Kostyuchenko VA, Lok SM
PDB-7bud:
Cryo-EM structure of Dengue virus serotype 2 complexed with Fab SIgN-3C at pH 8.0
Method: single particle / : Zhang S, Chew SV, Lim XN, Ng TS, Kostyuchenko VA, Lok SM
PDB-7bue:
Cryo-EM structure of Dengue virus serotype 2 complexed with Fab SIgN-3C at pH 5.0
Method: single particle / : Zhang S, Chew SV, Lim XN, Ng TS, Kostyuchenko VA, Lok SM
PDB-7buf:
Cryo-EM structure of Dengue virus serotype 2 complexed with SIgN-3C IgG
Method: single particle / : Zhang S, Chew SV, Lim XN, Ng TS, Kostyuchenko VA, Lok SM
PDB-6lnt:
Cryo-EM structure of immature Zika virus in complex with human antibody DV62.5 Fab
Method: single particle / : Tan TY, Fibriansah G, Kostyuchenko VA, Ng TS, Lim XX, Lim XN, Shi J, Morais MC, Corti D, Lok SM
PDB-6lnu:
Cryo-EM structure of immature Zika virus
Method: single particle / : Tan TY, Fibriansah G, Kostyuchenko VA, Ng TS, Lim XX, Lim XN, Shi J, Morais MC, Corti D, Lok SM
PDB-6idi:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 8.0.
Method: single particle / : Wirawan M, Fibriansah G, Ng TS, Zhang Q, Kostyuchenko VA, Shi J, Lok SM
PDB-6idk:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class I particle)
Method: single particle / : Wirawan M, Fibriansah G, Ng TS, Zhang Q, Kostyuchenko VA, Shi J, Lok SM
PDB-6idl:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class II particle)
Method: single particle / : Wirawan M, Fibriansah G, Ng TS, Zhang Q, Kostyuchenko VA, Shi J, Lok SM
PDB-5iz7:
Cryo-EM structure of thermally stable Zika virus strain H/PF/2013
Method: single particle / : Kostyuchenko VA, Zhang S, Fibriansah G, Lok SM
PDB-4uif:
Cryo-EM structure of Dengue virus serotype 2 in complex with antigen-binding fragments of human antibody 2D22
Method: single particle / : Fibriansah G, Ibarra KD, Ng TS, Smith SA, Tan JL, Lim XN, Ooi JSG, Kostyuchenko VA, Wang J, de Silva AM, Harris E, Crowe Junior JE, Lok SM
PDB-4uih:
Cryo-EM structure of Dengue virus serotype 2 strain New Guinea-C complexed with human antibody 2D22 Fab at 37 degree C. The Fab molecules were added to the virus before 37 degree C incubation.
Method: single particle / : Fibriansah G, Ibarra KD, Ng TS, Smith SA, Tan JL, Lim XN, Ooi JSG, Kostyuchenko VA, Wang J, de Silva AM, Harris E, Crowe JE, Lok SM
PDB-5a1z:
Cryo-EM structure of Dengue virus serotype 2 strain PVP94-07 complexed with human antibody 2D22 Fab at 37 degrees C
Method: single particle / : Fibriansah G, Ibarra KD, Ng TS, Smith SA, Tan JL, Lim XN, Ooi JSG, Kostyuchenko VA, Wang J, de Silva AM, Harris E, Crowe Jr JE, Lok SM
PDB-3j6s:
Cryo-EM structure of Dengue virus serotype 3 at 28 degrees C
Method: single particle / : Fibriansah G, Tan JL, Smith SA, de Alwis R, Ng TS, Kostyuchenko VA, Kukkaro P, de Silva AM, Crowe Jr JE, Lok SM
PDB-3j6t:
Cryo-EM structure of Dengue virus serotype 3 at 37 degrees C
Method: single particle / : Fibriansah G, Tan JL, Smith SA, de Alwis R, Ng TS, Kostyuchenko VA, Kukkaro P, de Silva AM, Crowe Jr JE, Lok SM
PDB-3j6u:
Cryo-EM structure of Dengue virus serotype 3 in complex with human antibody 5J7 Fab
Method: single particle / : Fibriansah G, Tan JL, Smith SA, de Alwis R, Ng TS, Kostyuchenko VA, Kukkaro P, de Silva AM, Crowe Jr JE, Lok SM
PDB-4c2i:
Cryo-EM structure of Dengue virus serotype 1 complexed with Fab fragments of human antibody 1F4
Method: single particle / : Fibriansah G, Tan JL, de Alwis R, Smith SA, Ng TS, Kostyuchenko VA, Ibarra KD, Harris E, de Silva A, Crowe Junior JE, Lok SM
PDB-4cbf:
Near-atomic resolution cryo-EM structure of Dengue serotype 4 virus
Method: single particle / : Kostyuchenko VA, Chew PL, Ng TS, Lok SM
PDB-4cct:
Dengue 1 cryo-EM reconstruction
Method: single particle / : Kostyuchenko VA, Zhang Q, Tan JL, Ng TS, Lok SM
PDB-4cau:
THREE-DIMENSIONAL STRUCTURE OF DENGUE VIRUS SEROTYPE 1 COMPLEXED WITH 2 HMAB 14C10 FAB
Method: single particle / : Teoh EP, Kukkaro P, Teo EW, Lim AP, Tan TT, Yip A, Schul W, Aung M, Kostyuchenko VA, Leo YS, Chan SH, Smith KG, Chan AH, Zou G, Ooi EE, Kemeny DM, Tan GK, Ng JK, Ng ML, Alonso S, Fisher D, Shi PY, Hanson BJ, Lok SM, Macary PA
PDB-4b03:
6A Electron cryomicroscopy structure of immature Dengue virus serotype 1
Method: single particle / : Kostyuchenko VA, Zhang Q, Tan LC, Ng TS, Lok SM
PDB-3zko:
The structure of ''breathing'' dengue virus.
Method: single particle / : Fibriansah G, Ng TS, Kostyuchenko VA, Lee S, Wang J, Lok SM
PDB-2yew:
Modeling Barmah Forest virus structural proteins
Method: single particle / : Kostyuchenko VA, Jakana J, Liu X, Haddow AD, Aung M, Weaver SC, Chiu W, Lok SM
PDB-3ixx:
The pseudo-atomic structure of West Nile immature virus in complex with Fab fragments of the anti-fusion loop antibody E53
Method: single particle / : Cherrier MV, Kaufmann B, Nybakken GE, Lok SM, Warren JT, Nelson CA, Kostyuchenko VA, Holdaway HA, Chipman PR, Kuhn RJ, Diamond MS, Rossmann MG, Fremont DH
PDB-3ixy:
The pseudo-atomic structure of dengue immature virus in complex with Fab fragments of the anti-fusion loop antibody E53
Method: single particle / : Cherrier MV, Kaufmann B, Nybakken GE, Lok SM, Warren JT, Nelson CA, Kostyuchenko VA, Holdaway HA, Chipman PR, Kuhn RJ, Diamond MS, Rossmann MG, Fremont DH
PDB-3foh:
Fitting of gp18M crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 extended tail
Method: single particle / : Aksyuk AA, Leiman PG, Kurochkina LP, Shneider MM, Kostyuchenko VA, Mesyanzhinov VV, Rossmann MG
PDB-3foi:
Fitting of gp18M crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 contracted tail
Method: single particle / : Aksyuk AA, Leiman PG, Kurochkina LP, Shneider MM, Kostyuchenko VA, Mesyanzhinov VV, Rossmann MG
PDB-3c6r:
Low pH Immature Dengue Virus
Method: single particle / : Yu I, Zhang W, Holdway HA, Li L, Kostyuchenko VA, Chipman PR, Kuhn RJ, Rossmann MG, Chen J
PDB-2nsu:
Crystal structure of the ectodomain of human transferrin receptor fitted into a cryo-EM reconstruction of canine parvovirus and feline transferrin receptor complex
Method: single particle / : Hafenstein S, Kostyuchenko VA, Rossmann MG
PDB-2bsg:
The modeled structure of fibritin (gpwac) of bacteriophage T4 based on cryo-EM reconstruction of the extended tail of bacteriophage T4
Method: helical / : Kostyuchenko VA, Chipman PR, Leiman PG, Arisaka F, Mesyanzhinov VV, Rossmann MG
PDB-1zku:
Fitting of the gp9 structure in the EM density of bacteriophage T4 extended tail
Method: single particle / : Kostyuchenko VA
PDB-1tja:
Fitting of gp8, gp9, and gp11 into the cryo-EM reconstruction of the bacteriophage T4 contracted tail
Method: single particle / : Leiman PG, Chipman PR, Kostyuchenko VA, Mesyanzhinov VV, Rossmann MG
PDB-1pdf:
Fitting of gp11 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 baseplate-tail tube complex
Method: single particle / : Kostyuchenko VA, Leiman PG, Chipman PR, Kanamaru S, van Raaij MJ, Arisaka F, Mesyanzhinov VV, Rossmann MG
PDB-1pdi:
Fitting of the C-terminal part of the short tail fibers into the cryo-EM reconstruction of T4 baseplate
Method: single particle / : Kostyuchenko VA, Leiman PG, Chipman PR, Kanamaru S, van Raaij MJ, Arisaka F, Mesyanzhinov VV, Rossmann MG
PDB-1pdj:
Fitting of gp27 into cryoEM reconstruction of bacteriophage T4 baseplate
Method: single particle / : Kostyuchenko VA, Leiman PG, Chipman PR, Kanamaru S, van Raaij MJ, Arisaka F, Mesyanzhinov VV, Rossmann MG
PDB-1pdl:
Fitting of gp5 in the cryoEM reconstruction of the bacteriophage T4 baseplate
Method: single particle / : Kostyuchenko VA, Leiman PG, Chipman PR, Kanamaru S, van Raaij MJ, Arisaka F, Mesyanzhinov VV, Rossmann MG
PDB-1pdm:
Fitting of gp8 structure into the cryoEM reconstruction of the bacteriophage T4 baseplate
Method: single particle / : Kostyuchenko VA, Leiman PG, Chipman PR, Kanamaru S, van Raaij MJ, Arisaka F, Mesyanzhinov VV, Rossmann MG
PDB-1pdp:
Fitting of gp9 structure into the bacteriophage T4 baseplate cryoEM reconstruction
Method: single particle / : Kostyuchenko VA, Leiman PG, Chipman PR, Kanamaru S, van Raaij MJ, Arisaka F, Mesyanzhinov VV, Rossmann MG