[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 44 items for (author: de & march & m)

EMDB-28900:
Propionate bound to human olfactory receptor OR51E2 in complex with miniGs399 (transmembrane domain)
Method: single particle / : Billesboelle CB, Manglik A

EMDB-28896:
Human olfactory receptor OR51E2 bound to propionate in complex with miniGs399
Method: single particle / : Billesboelle CB, Manglik A

PDB-8f76:
Human olfactory receptor OR51E2 bound to propionate in complex with miniGs399
Method: single particle / : Billesboelle CB, Manglik A

EMDB-14922:
cryo-EM structure of omicron spike in complex with de novo designed binder, full map
Method: single particle / : Pablo G, Sarah W, Alexandra VH, Anthony M, Andreas S, Zander H, Dongchun N, Shuguang T, Freyr S, Casper G, Priscilla T, Alexandra T, Stephane R, Sandrine G, Jane M, Aaron P, Zepeng X, Yan C, Pu H, George G, Elisa O, Beat F, Didier T, Henning S, Michael B, Bruno EC

PDB-7zrv:
cryo-EM structure of omicron spike in complex with de novo designed binder, full map
Method: single particle / : Pablo G, Sarah W, Alexandra VH, Anthony M, Andreas S, Zander H, Dongchun N, Shuguang T, Freyr S, Casper G, Priscilla T, Alexandra T, Stephane R, Sandrine G, Jane M, Aaron P, Zepeng X, Yan C, Pu H, George G, Elisa O, Beat F, Didier T, Henning S, Michael B, Bruno EC

EMDB-14930:
cryo-EM structure of omicron spike in complex with de novo designed binder, local
Method: single particle / : Pablo G, Sarah W, Alexandra VH, Anthony M, Andreas S, Zander H, Dongchun N, Shuguang T, Freyr S, Casper G, Priscilla T, Alexandra T, Stephane R, Sandrine G, Jane M, Aaron P, Zepeng X, Yan C, Pu H, George G, Elisa O, Beat F, Didier T, Henning S, Michael B, Bruno EC

EMDB-14947:
cryo-EM structure of D614 spike in complex with de novo designed binder, full and local maps(addition)
Method: single particle / : Pablo G, Sarah W, Alexandra VH, Anthony M, Andreas S, Zander H, Dongchun N, Shuguang T, Freyr S, Casper G, Priscilla T, Alexandra T, Stephane R, Sandrine G, Jane M, Aaron P, Zepeng X, Yan C, Pu H, George G, Elisa O, Beat F, Didier T, Henning S, Michael B, Bruno EC

PDB-7zsd:
cryo-EM structure of omicron spike in complex with de novo designed binder, local
Method: single particle / : Pablo G, Sarah W, Alexandra VH, Anthony M, Andreas S, Zander H, Dongchun N, Shuguang T, Freyr S, Casper G, Priscilla T, Alexandra T, Stephane R, Sandrine G, Jane M, Aaron P, Zepeng X, Yan C, Pu H, George G, Elisa O, Beat F, Didier T, Henning S, Michael B, Bruno EC

PDB-7zss:
cryo-EM structure of D614 spike in complex with de novo designed binder
Method: single particle / : Pablo G, Sarah W, Alexandra VH, Anthony M, Andreas S, Zander H, Dongchun N, Shuguang T, Freyr S, Casper G, Priscilla T, Alexandra T, Stephane R, Sandrine G, Jane M, Aaron P, Zepeng X, Yan C, Pu H, George G, Elisa O, Beat F, Didier T, Henning S, Michael B, Bruno EC

EMDB-28092:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-093
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28090:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-040
Method: single particle / : Li H, Callaway H, Yu X, Shek J, Saphire EO

EMDB-28091:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-045
Method: single particle / : Li H, Callaway H, Yu X, Shek J, Saphire EO

EMDB-28093:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-156
Method: single particle / : Shek J, Callaway H, Li H, Yu X, Saphire EO

EMDB-28094:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-234
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28095:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-260
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28096:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-279
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28097:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-290
Method: single particle / : Yu X, Callaway H, Li H, Shek J, Saphire EO

EMDB-28098:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-294
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28099:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-295
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28100:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-299
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28102:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-334
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28103:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-360
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28104:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-361
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28105:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-362
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28106:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-368
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28168:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-292
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28169:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-333
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28170:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-355
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-28171:
Negative stain EM map of SARS-CoV-2 Spike in complex with CoVIC-371
Method: single particle / : Callaway H, Li H, Yu X, Shek J, Saphire EO

EMDB-13319:
Human methemoglobin bound to Staphylococcus aureus hemophore IsdB
Method: single particle / : De Bei O, Chirgadze DY, Hardwick SW, Luisi BF, Campanini B

EMDB-13320:
Human carboxyhemoglobin bound to Staphylococcus aureus hemophore IsdB - 1:2 complex
Method: single particle / : De Bei O, Chirgadze DY, Hardwick SW, Luisi BF, Campanini B

EMDB-13325:
Human carboxyhemoglobin bound to Staphylococcus aureus hemophore IsdB - 1:1 complex
Method: single particle / : De Bei O, Chirgadze DY, Hardwick SW, Luisi BF, Campanini B

PDB-7pcf:
Human methemoglobin bound to Staphylococcus aureus hemophore IsdB
Method: single particle / : De Bei O, Gianquinto E, Chirgadze DY, Hardwick SW, Spyrakis F, Luisi BF, Campanini B

PDB-7pch:
Human carboxyhemoglobin bound to Staphylococcus aureus hemophore IsdB - 1:2 complex
Method: single particle / : De Bei O, Gianquinto E, Chirgadze DY, Hardwick SW, Spyrakis F, Luisi BF, Campanini B

PDB-7pcq:
Human carboxyhemoglobin bound to Staphylococcus aureus hemophore IsdB - 1:1 complex
Method: single particle / : De Bei O, Gianquinto E, Chirgadze DY, Hardwick SW, Spyrakis F, Luisi BF, Campanini B

EMDB-4704:
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 1, free nuclesome
Method: single particle / : Marabelli C, Pilotto S, Chittori S, Subramaniam S, Mattevi A

EMDB-4705:
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 2
Method: single particle / : Marabelli C, Pilotto S, Chittori S, Subramaniam S, Mattevi A

EMDB-4710:
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 3
Method: single particle / : Marabelli C, Pilotto S, Chittori S, Subramaniam S, Mattevi A

EMDB-4711:
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 4
Method: single particle / : Marabelli C, Pilotto S, Chittori S, Subramaniam S, Mattevi A

EMDB-4712:
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 5
Method: single particle / : Marabelli C, Pilotto S, Chittori S, Subramaniam S, Mattevi A

PDB-6r1t:
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 1, free nuclesome
Method: single particle / : Marabelli C, Pilotto S, Chittori S, Subramaniam S, Mattevi A

PDB-6r1u:
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 2
Method: single particle / : Marabelli C, Pilotto S, Chittori S, Subramaniam S, Mattevi A

PDB-6r25:
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 3
Method: single particle / : Marabelli C, Pilotto S, Chittori S, Subramaniam S, Mattevi A

EMDB-2640:
Negative-stain electron microscopy of the human GINS complex
Method: single particle / : Carroni M, De March M, Krastanova I, Medagli B, Taylor IK, Brick P, Amenitsch H, Patwardhan A, Onesti S

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more