[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 124 items for (author: britt & w)

EMDB-29281:
Cryo-EM structure of STING oligomer bound to cGAMP and NVS-STG2
Method: single particle / : Li J, Canham SM, Zhang X, Bai X, Feng Y

EMDB-29282:
Cryo-EM structure of STING oligomer bound to cGAMP, NVS-STG2 and C53
Method: single particle / : Li J, Canham SM, Zhang X, Bai X, Feng Y

PDB-8flk:
Cryo-EM structure of STING oligomer bound to cGAMP and NVS-STG2
Method: single particle / : Li J, Canham SM, Zhang X, Bai X, Feng Y

PDB-8flm:
Cryo-EM structure of STING oligomer bound to cGAMP, NVS-STG2 and C53
Method: single particle / : Li J, Canham SM, Zhang X, Bai X, Feng Y

EMDB-29578:
G4 RNA-mediated PRC2 dimer
Method: single particle / : Song J, Kasinath V

EMDB-29647:
Body1 of G4 RNA-mediated PRC2 dimer from multibody refinement
Method: single particle / : Jiarui JS, Vignesh VK

EMDB-29656:
Body2 of G4 RNA-mediated PRC2 dimer from multibody refinement
Method: single particle / : Jiarui JS, Vignesh VK

PDB-8fyh:
G4 RNA-mediated PRC2 dimer
Method: single particle / : Song J, Kasinath V

EMDB-17540:
Cryo-EM structure of full-length human UBR5 (homotetramer)
Method: single particle / : Aguirre JD, Kater L, Kempf G, Cavadini S, Thoma NH

PDB-8p83:
Cryo-EM structure of full-length human UBR5 (homotetramer)
Method: single particle / : Aguirre JD, Kater L, Kempf G, Cavadini S, Thoma NH

EMDB-17542:
Negative stain map of UBR5 (dimer) in complex with RARA/RXRA
Method: single particle / : Aguirre JD, Cavadini S, Kempf G, Kater L, Thoma NH

EMDB-15022:
CryoEM structure of Ku heterodimer bound to DNA, PAXX and XLF
Method: single particle / : Hardwick SW, Kefala-Stavridi A, Chirgadze DY, Blundell TL, Chaplin AK

EMDB-16044:
DNA-PK Ku80 mediated dimer bound to PAXX
Method: single particle / : Hardwick SW, Chaplin AK

EMDB-16070:
DNA-PK XLF mediated dimer bound to PAXX
Method: single particle / : Hardwick SW, Chaplin AK

EMDB-16074:
DNA-PK Ku80 mediated dimer bound to PAXX and XLF
Method: single particle / : Hardwick SW, Chaplin AK

PDB-7zyg:
CryoEM structure of Ku heterodimer bound to DNA, PAXX and XLF
Method: single particle / : Hardwick SW, Kefala-Stavridi A, Chirgadze DY, Blundell TL, Chaplin AK

PDB-8bh3:
DNA-PK Ku80 mediated dimer bound to PAXX
Method: single particle / : Hardwick SW, Chaplin AK

PDB-8bhv:
DNA-PK XLF mediated dimer bound to PAXX
Method: single particle / : Hardwick SW, Chaplin AK

PDB-8bhy:
DNA-PK Ku80 mediated dimer bound to PAXX and XLF
Method: single particle / : Hardwick SW, Chaplin AK

EMDB-14995:
CryoEM structure of Ku heterodimer bound to DNA and PAXX
Method: single particle / : Hardwick SW, Kefala-Stavridi A, Chirgadze DY, Blundell TL, Chaplin AK

PDB-7zwa:
CryoEM structure of Ku heterodimer bound to DNA and PAXX
Method: single particle / : Hardwick SW, Kefala-Stavridi A, Chirgadze DY, Blundell TL, Chaplin AK

EMDB-14986:
CryoEM structure of Ku heterodimer bound to DNA
Method: single particle / : Hardwick SW, Kefala-Stavridi A, Chirgadze DY, Blundell TL, Chaplin AK

PDB-7zvt:
CryoEM structure of Ku heterodimer bound to DNA
Method: single particle / : Hardwick SW, Kefala-Stavridi A, Chirgadze DY, Blundell TL, Chaplin AK

EMDB-14955:
Cryo-EM structure of Ku 70/80 bound to inositol hexakisphosphate
Method: single particle / : Kefala Stavridi A, Chaplin AK, Blundell TL

PDB-7zt6:
Cryo-EM structure of Ku 70/80 bound to inositol hexakisphosphate
Method: single particle / : Kefala Stavridi A, Chaplin AK, Blundell TL

EMDB-15244:
Tomogram of an Ebola VLP composed of GP, VP40, NP, VP24 and VP35 at pH 7.4 (Figure 1A-D)
Method: electron tomography / : Winter SL, Chlanda P

EMDB-15268:
Tomogram of an Ebola VLP composed of VP40 at pH 4.5 (Figure 1J)
Method: electron tomography / : Winter SL, Chlanda P

EMDB-15951:
Tomogram of an EBOV-infected Huh7 cell showing a late endosome with internalized EBOV particles
Method: electron tomography / : Winter SL, Chlanda P

EMDB-15956:
Tomogram of an extracellular EBOV particle adjacent to an EBOV-infected Huh7 cell
Method: electron tomography / : Winter SL, Chlanda P

EMDB-16128:
Tomogram of a late endosome of A549 cell infected with influenza A virus.
Method: electron tomography / : Klein S, Chlanda P

EMDB-16129:
Tomogram of a late endosome of A549 cell infected with influenza A virus (Figure 6C).
Method: electron tomography / : Klein S, Chlanda P

EMDB-16130:
Tomogram of a late endosome of A549 cell infected with influenza A virus (Figure 6E)
Method: electron tomography / : Klein S, Chlanda P

EMDB-16131:
Tomogram of a late endosome of A549 cell infected with influenza A virus (Figure 6G)
Method: electron tomography / : Klein S, Chlanda P

EMDB-16132:
Tomogram of a late endosome of A549 cell infected with influenza A virus (Figure 6I,K,M)
Method: electron tomography / : Klein S, Chlanda P

EMDB-16133:
Tomogram of a late endosome of A549 cell infected with influenza A virus (Figure 6O)
Method: electron tomography / : Klein S, Chlanda P

EMDB-29714:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF16-BRD4(BD2)-MMH2
Method: single particle / : Ma MW, Hunkeler M, Jin CY, Fischer ES

PDB-8g46:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF16-BRD4(BD2)-MMH2
Method: single particle / : Ma MW, Hunkeler M, Jin CY, Fischer ES

EMDB-15705:
Tomogram of a late endosome of A549 cell (Figure 1R)
Method: electron tomography / : Klein S, Chlanda P

EMDB-15707:
Tomogram of a late endosome of A549 cell treated with IFN-beta (Figure 1T)
Method: electron tomography / : Klein S, Chlanda P

EMDB-15708:
Tomogram of a late endosome of A549-IFITM3 cell (Figure 1V)
Method: electron tomography / : Klein S, Chlanda P

EMDB-15131:
Tomogram of a late endosome of A549-IFITM3 cells infected with influenza A virus (Figure S7)
Method: electron tomography / : Klein S, Chlanda P

EMDB-15130:
Tomogram of a late endosome of A549-IFITM3 cells infected with influenza A virus (Figure 4E)
Method: electron tomography / : Klein S, Chlanda P

EMDB-15132:
Tomogram of a late endosome of A549-IFITM3 cells infected with influenza A virus (Figure S8)
Method: electron tomography / : Klein S, Chlanda P

EMDB-15133:
Tomogram of a late endosome of A549-IFITM3 cells infected with influenza A virus (Figure S9)
Method: electron tomography / : Klein S, Chlanda P

EMDB-24937:
44SR3C ribosomal particle
Method: single particle / : Ortega J, Seffouh A

EMDB-24940:
44SR3C ribosomal particle class 2
Method: single particle / : Ortega J, Seffouh A

EMDB-24950:
44SR70P Class1 ribosomal particle
Method: single particle / : Ortega J, Seffouh A

EMDB-24951:
44SR70P Class2 ribosomal particle
Method: single particle / : Ortega J, Seffouh A

EMDB-24960:
The RbgA treated 44SR3C particles_Class1
Method: single particle / : Ortega J, Seffouh A

EMDB-24962:
The RbgA treated 44SR3C particles _Class2
Method: single particle / : Ortega J, Seffouh A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more