[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,329 items for (author: ban & v)

EMDB-43751:
TRPM7 structure in complex with anticancer agent CCT128930 in closed state
Method: single particle / : Nadezhdin KD, Sobolevsky AI

PDB-8w2l:
TRPM7 structure in complex with anticancer agent CCT128930 in closed state
Method: single particle / : Nadezhdin KD, Sobolevsky AI

EMDB-40650:
Phosphoinositide phosphate 3 kinase gamma
Method: single particle / : Chen CL, Tesmer JJG, Bandekar SJ, Cash J

EMDB-40651:
Phosphoinositide phosphate 3 kinase gamma bound with ATP
Method: single particle / : Chen CL, Tesmer JJG, Bandekar SJ, Cash J

EMDB-40652:
Phosphoinositide phosphate 3 kinase gamma bound with ADP
Method: single particle / : Chen CL, Tesmer JJG, Bandekar SJ, Cash J

EMDB-40653:
Phosphoinositide phosphate 3 kinase gamma bound with ADP and Gbetagamma
Method: single particle / : Chen CL, Tesmer JJG, Bandekar SJ, Cash J

EMDB-40654:
Phosphoinositide phosphate 3 kinase gamma bound with ADP and two Gbetagamma subunits in State 1
Method: single particle / : Chen CL, Tesmer JJG, Bandekar SJ, Cash J

EMDB-40655:
Phosphoinositide phosphate 3 kinase gamma bound with ADP and two Gbetagamma subunits in State 2
Method: single particle / : Chen CL, Tesmer JJG, Bandekar SJ, Cash J

EMDB-41907:
Computationally Designed, Expandable O4 Octahedral Handshake Nanocage
Method: single particle / : Weidle C, Borst A

EMDB-42031:
Computational Designed Nanocage O43_129_+8
Method: single particle / : Weidle C, Kibler RD

EMDB-19440:
Cryo-EM structure of human NTCP-Bulevirtide complex
Method: single particle / : Liu H, Zakrzewicz D, Nosol K, Irobalieva RN, Mukherjee S, Bang-Soerensen R, Goldmann N, Kunz S, Rossi L, Kossiakoff AA, Urban S, Glebe D, Geyer J, Locher KP

PDB-8rqf:
Cryo-EM structure of human NTCP-Bulevirtide complex
Method: single particle / : Liu H, Zakrzewicz D, Nosol K, Irobalieva RN, Mukherjee S, Bang-Soerensen R, Goldmann N, Kunz S, Rossi L, Kossiakoff AA, Urban S, Glebe D, Geyer J, Locher KP

EMDB-43318:
Twistless helix 12 repeat ring design R12B
Method: single particle / : Calise SJ, Kollman JM

EMDB-29974:
Cryo-EM structure of synthetic tetrameric building block sC4
Method: single particle / : Redler RL, Huddy TF, Hsia Y, Baker D, Ekiert D, Bhabha G

EMDB-41364:
CryoEM Structure of a Computationally Designed T3 Tetrahedral Nanocage
Method: single particle / : Weidle C, Borst AJ

EMDB-42906:
Computational Designed Nanocage O43_129
Method: single particle / : Weidle C, Kibler RD

EMDB-42944:
Computational Designed Nanocage O43_129_+4
Method: single particle / : Carr KD, Weidle C, Borst AJ

PDB-8gel:
Cryo-EM structure of synthetic tetrameric building block sC4
Method: single particle / : Redler RL, Huddy TF, Hsia Y, Baker D, Ekiert D, Bhabha G

PDB-8tl7:
CryoEM Structure of a Computationally Designed T3 Tetrahedral Nanocage
Method: single particle / : Weidle C, Borst AJ

PDB-8v2d:
Computational Designed Nanocage O43_129
Method: single particle / : Weidle C, Kibler RD

PDB-8v3b:
Computational Designed Nanocage O43_129_+4
Method: single particle / : Carr KD, Weidle C, Borst AJ

EMDB-19042:
MAP7 MTBD (microtubule binding domain) decorated microtubule protofilament
Method: single particle / : Bangera M, Moores CA

EMDB-19043:
MAP7 MTBD (microtubule binding domain) decorated Taxol stabilized microtubule (13pf) protofilament
Method: single particle / : Bangera M, Moores CA

EMDB-19044:
MAP7 MTBD (microtubule binding domain) decorated Taxol stabilized microtubule (14pf) protofilament
Method: single particle / : Bangera M, Moores CA

PDB-8rc1:
MAP7 MTBD (microtubule binding domain) decorated microtubule protofilament
Method: single particle / : Bangera M, Moores CA

EMDB-19184:
Late alpha-Synuclein fibril structure from liquid-liquid phase separations.
Method: helical / : De Simone A, Barritt JD, Chen S, Cascella R, Cecchi C, Bigi A, Jarvis JA, Chiti F, Dobson CM, Fusco G

PDB-8ri9:
Late alpha-Synuclein fibril structure from liquid-liquid phase separations.
Method: helical / : De Simone A, Barritt JD, Chen S, Cascella R, Cecchi C, Bigi A, Jarvis JA, Chiti F, Dobson CM, Fusco G

EMDB-35817:
Structure of Niacin-GPR109A-G protein complex
Method: single particle / : Yadav MK, Sarma P, Chami M, Banerjee R, Shukla AK

EMDB-35822:
Structure of MK6892-GPR109A-G-protein complex
Method: single particle / : Yadav MK, Sarma P, Chami M, Banerjee R, Shukla AK

EMDB-35831:
Structure of GSK256073-GPR109A-G-protein complex
Method: single particle / : Yadav MK, Sarma P, Chami M, Banerjee R, Shukla AK

EMDB-36193:
Structure of Acipimox-GPR109A-G protein complex
Method: single particle / : Yadav MK, Sarma P, Chami M, Banerjee R, Shukla AK

EMDB-36280:
Structure of MMF-GPR109A-G protein complex
Method: single particle / : Yadav MK, Sarma P, Chami M, Banerjee R, Shukla AK

PDB-8iy9:
Structure of Niacin-GPR109A-G protein complex
Method: single particle / : Yadav MK, Sarma P, Chami M, Banerjee R, Shukla AK

PDB-8iyh:
Structure of MK6892-GPR109A-G-protein complex
Method: single particle / : Yadav MK, Sarma P, Chami M, Banerjee R, Shukla AK

PDB-8iyw:
Structure of GSK256073-GPR109A-G-protein complex
Method: single particle / : Yadav MK, Sarma P, Chami M, Banerjee R, Shukla AK

PDB-8jer:
Structure of Acipimox-GPR109A-G protein complex
Method: single particle / : Yadav MK, Sarma P, Chami M, Banerjee R, Shukla AK

PDB-8jhn:
Structure of MMF-GPR109A-G protein complex
Method: single particle / : Yadav MK, Sarma P, Chami M, Banerjee R, Shukla AK

EMDB-19250:
Pseudoatomic model of a second-order Sierpinski triangle formed by the citrate synthase from Synechococcus elongatus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

EMDB-19251:
Structure of a first order Sierpinski triangle formed by the H369R mutant of the citrate synthase from Synechococcus elongatus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

PDB-8rjk:
Pseudoatomic model of a second-order Sierpinski triangle formed by the citrate synthase from Synechococcus elongatus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

PDB-8rjl:
Structure of a first order Sierpinski triangle formed by the H369R mutant of the citrate synthase from Synechococcus elongatus
Method: single particle / : Lo YK, Bohn S, Sendker FL, Schuller JM, Hochberg G

EMDB-16903:
60S ribosomal subunit bound to the E3-UFM1 complex (native, UFM1 pulldown)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

EMDB-16880:
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

EMDB-16902:
60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

EMDB-16905:
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)
Method: single particle / : Penchev I, DaRosa PA, Peter JJ, Kulathu Y, Becker T, Beckmann R, Kopito R

EMDB-16908:
60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

PDB-8ohd:
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

PDB-8oj0:
60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

PDB-8oj5:
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)
Method: single particle / : Penchev I, DaRosa PA, Peter JJ, Kulathu Y, Becker T, Beckmann R, Kopito R

PDB-8oj8:
60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)
Method: single particle / : Penchev I, DaRosa PA, Becker T, Beckmann R, Kopito R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more