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3FBD
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BU of 3fbd by Molmil
Crystal structure of the nuclease domain of COLE7(D493Q mutant) in complex with an 18-BP duplex DNA
Descriptor: 5'-D(*DGP*DGP*DAP*DAP*DTP*DTP*DCP*DGP*DAP*DTP*DCP*DGP*DAP*DAP*DTP*DTP*DCP*DC)-3', Colicin-E7
Authors:Wang, Y.T, Doudeva, L.G, Yuan, H.S.
Deposit date:2008-11-19
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Redesign of high-affinity nonspecific nucleases with altered sequence preference
To be Published
2IVH
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BU of 2ivh by Molmil
Crystal structure of the nuclease domain of ColE7 (H545Q mutant) in complex with an 18-bp duplex DNA
Descriptor: 5'-D(*GP*GP*AP*AP*TP*TP*CP*GP*AP*TP *CP*GP*AP*AP*TP*TP*CP*C)-3', COLCIN-E7, ZINC ION
Authors:Wang, Y.T, Yang, W.J, Li, C.L, Doudeva, L.G, Yuan, H.S.
Deposit date:2006-06-13
Release date:2007-01-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for Sequence-Dependent DNA Cleavage by Nonspecific Endonucleases.
Nucleic Acids Res., 35, 2007
2IVK
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BU of 2ivk by Molmil
Crystal structure of the periplasmic endonuclease Vvn complexed with a 16-bp DNA
Descriptor: 5'-D(*AP*AP*TP*TP*CP*GP*AP*TP*CP*GP *AP*AP*TP*TP*C)-3', 5'-D(*GP*AP*AP*TP*TP*CP*GP*AP*TP*CP *GP*AP*AP*TP*T)-3', 5'-D(*GP*AP*AP*TP*TP*CP*GP*AP*TP*CP *GP*AP*AP*TP*TP*C)-3', ...
Authors:Wang, Y.T, Yang, W.J, Li, C.L, Doudeva, L.G, Yuan, H.S.
Deposit date:2006-06-14
Release date:2007-01-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Basis for Sequence-Dependent DNA Cleavage by Nonspecific Endonucleases.
Nucleic Acids Res., 35, 2007
4IUF
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BU of 4iuf by Molmil
Crystal Structure of Human TDP-43 RRM1 Domain in Complex with a Single-stranded DNA
Descriptor: 5'-D(*GP*TP*TP*GP*(XUA)P*GP*CP*GP*T)-3', TAR DNA-binding protein 43
Authors:Kuo, P.H, Doudeva, L.G, Wang, Y.T, Yang, W.Z, Yuan, H.S.
Deposit date:2013-01-21
Release date:2014-01-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.752 Å)
Cite:The crystal structure of TDP-43 RRM1-DNA complex reveals the specific recognition for UG- and TG-rich nucleic acids.
Nucleic Acids Res., 42, 2014
8GQU
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BU of 8gqu by Molmil
AK-42 inhibitor binding human ClC-2 TMD
Descriptor: 2-[[2,6-bis(chloranyl)-3-phenylmethoxy-phenyl]amino]pyridine-3-carboxylic acid, Chloride channel protein 2
Authors:Wang, L.
Deposit date:2022-08-30
Release date:2023-07-05
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structures of ClC-2 chloride channel reveal the blocking mechanism of its specific inhibitor AK-42
Nat Commun, 14, 2023
3D2W
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BU of 3d2w by Molmil
Crystal structure of mouse TDP-43 RRM2 domain in complex with DNA
Descriptor: DNA (5'-D(*DGP*DTP*DTP*DGP*DAP*DGP*DCP*DGP*DTP*DT)-3'), PHOSPHATE ION, TAR DNA-binding protein 43
Authors:Kuo, P.H, Yuan, H.S.
Deposit date:2008-05-09
Release date:2009-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into TDP-43 in nucleic-acid binding and domain interactions
Nucleic Acids Res., 37, 2009
3GIX
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BU of 3gix by Molmil
Crystal structure of human splicing factor dim2
Descriptor: Thioredoxin-like protein 4B, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Jin, T.C, Guo, F, Zhang, Y.Z.
Deposit date:2009-03-06
Release date:2010-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Crystal structure of human splicing factor dim2
To be Published
7XF5
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BU of 7xf5 by Molmil
Full length human CLC-2 channel in apo state
Descriptor: Chloride channel protein 2
Authors:Wang, L.
Deposit date:2022-04-01
Release date:2023-05-03
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures of ClC-2 chloride channel reveal the blocking mechanism of its specific inhibitor AK-42
Nat Commun, 14, 2023
7XJA
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BU of 7xja by Molmil
TMD masked refine map of human ClC-2
Descriptor: Chloride channel protein 2
Authors:Wang, L.
Deposit date:2022-04-15
Release date:2023-05-17
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structures of ClC-2 chloride channel reveal the blocking mechanism of its specific inhibitor AK-42
Nat Commun, 14, 2023
3S5B
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BU of 3s5b by Molmil
Crystal Structure of CED-3 Protease Suppressor-6 (CPS-6) from Caenorhabditis elegans
Descriptor: Endonuclease G, MAGNESIUM ION
Authors:Yuan, H.S, Lin, J.L.J.
Deposit date:2011-05-23
Release date:2012-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Structural insights into apoptotic DNA degradation by CED-3 protease suppressor-6 (CPS-6) from Caenorhabditis elegans
J.Biol.Chem., 287, 2012
3V9W
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BU of 3v9w by Molmil
Crystal structure of RNase T in complex with a preferred ssDNA (TTA) with two Mg in the active site
Descriptor: COBALT (II) ION, DNA (5'-D(*GP*CP*TP*TP*A)-3'), MAGNESIUM ION, ...
Authors:Hsiao, Y.-Y, Yuan, H.S.
Deposit date:2011-12-28
Release date:2012-07-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
3V9Z
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BU of 3v9z by Molmil
Crystal structure of RNase T in complex with a product ssDNA (ACC) with one Mg in the active site
Descriptor: COBALT (II) ION, DNA (5'-D(*TP*TP*AP*CP*AP*CP*C)-3'), MAGNESIUM ION, ...
Authors:Hsiao, Y.-Y, Yuan, H.S.
Deposit date:2011-12-28
Release date:2012-07-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
3V9S
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BU of 3v9s by Molmil
Crystal structure of RNase T in complex with a product ssDNA (AAC) with one Mg in the active site
Descriptor: COBALT (II) ION, DNA (5'-D(*TP*TP*AP*CP*AP*AP*C)-3'), MAGNESIUM ION, ...
Authors:Hsiao, Y.-Y, Yuan, H.S.
Deposit date:2011-12-28
Release date:2012-07-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
3V9U
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BU of 3v9u by Molmil
Crystal structure of RNase T in complex with a preferred ssDNA (AAT) with two Mg in the active site
Descriptor: COBALT (II) ION, DNA (5'-D(*TP*TP*AP*CP*AP*AP*T)-3'), MAGNESIUM ION, ...
Authors:Hsiao, Y.-Y, Yuan, H.S.
Deposit date:2011-12-28
Release date:2012-07-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
3VA3
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BU of 3va3 by Molmil
Crystal structure of RNase T in complex with a duplex DNA product (stem loop DNA with 2 nucleotide 3' overhang)
Descriptor: COBALT (II) ION, DNA (5'-D(*GP*GP*CP*CP*CP*TP*CP*TP*TP*TP*AP*GP*GP*GP*CP*CP*TP*T)-3'), Ribonuclease T
Authors:Hsiao, Y.-Y, Yuan, H.S.
Deposit date:2011-12-28
Release date:2012-07-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.714 Å)
Cite:How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
3V9X
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BU of 3v9x by Molmil
Crystal structure of RNase T in complex with a preferred ssDNA (AAA) with two Mg in the active site
Descriptor: DNA (5'-D(*TP*TP*AP*TP*AP*AP*A)-3'), MAGNESIUM ION, Ribonuclease T
Authors:Hsiao, Y.-Y, Yuan, H.S.
Deposit date:2011-12-28
Release date:2012-07-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
3VA0
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BU of 3va0 by Molmil
Crystal structure of RNase T in complex with a di-nucleotide product (GG) with one Mg in the active site
Descriptor: COBALT (II) ION, DNA (5'-D(*GP*G)-3'), MAGNESIUM ION, ...
Authors:Hsiao, Y.-Y, Yuan, H.S.
Deposit date:2011-12-28
Release date:2012-07-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes
Nucleic Acids Res., 40, 2012
4Y0F
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BU of 4y0f by Molmil
Crystal Structure of Human TDP-43 RRM1 Domain in Complex with an Unmodified Single-stranded DNA
Descriptor: DNA (5'-D(*GP*TP*TP*GP*AP*GP*CP*GP*TP*T)-3'), TAR DNA-binding protein 43
Authors:Chiang, C.H, Kuo, P.H, Doudeva, L.G, Wang, Y.T, Yuan, H.S.
Deposit date:2015-02-06
Release date:2016-02-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.648 Å)
Cite:Structural analysis of disease-related TDP-43 D169G mutation: linking enhanced stability and caspase cleavage efficiency to protein accumulation
Sci Rep, 6, 2016
4QN0
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BU of 4qn0 by Molmil
Crystal structure of the CPS-6 mutant Q130K
Descriptor: Endonuclease G, mitochondrial, MAGNESIUM ION
Authors:Lin, J.L.J, Yuan, H.S.
Deposit date:2014-06-17
Release date:2015-06-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Oxidative Stress Impairs Cell Death by Repressing the Nuclease Activity of Mitochondrial Endonuclease G
Cell Rep, 16, 2016

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