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5I4F
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BU of 5i4f by Molmil
scFv 2D10 complexed with alpha 1,6 mannobiose
Descriptor: alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose, scFv 2D10
Authors:Vashisht, S, Kumar, A, Kaur, K.J, Salunke, D.M.
Deposit date:2016-02-12
Release date:2016-12-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.549 Å)
Cite:Antibodies Can Exploit Molecular Crowding to Bind New Antigens at Noncanonical Paratope Positions
CHEMISTRYSELECT, 1, 2016
8JSB
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BU of 8jsb by Molmil
Antibody scFv against the Matrix protein 2 of influenza virus
Descriptor: single chain variable fragment
Authors:Kumar, U, Gaur, V, Salunke, D.M.
Deposit date:2023-06-19
Release date:2024-05-29
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Antibody scFv against the Matrix protein 2 of influenza virus
To Be Published
7W9A
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BU of 7w9a by Molmil
Dynamics of lipid displacement inside the hydrophobic cavity of a non-specific lipid transfer protein from Solanum melongena
Descriptor: LAURIC ACID, Non-specific lipid-transfer protein
Authors:Madni, Z.K, Kumar, A, Salunke, D.M.
Deposit date:2021-12-09
Release date:2022-07-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Dynamics of lipid displacement inside the hydrophobic cavity of a nonspecific lipid transfer protein from Solanum melongena .
J.Biomol.Struct.Dyn., 41, 2023
7YUE
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BU of 7yue by Molmil
Epitope-directed anti-SARS CoV 2 scFv engineered against the key spike protein region.
Descriptor: Single chain variable Fragment, Spike protein S2
Authors:Kumar, U, Jaiswal, D, Gaur, V, Salunke, D.M.
Deposit date:2022-08-17
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Epitope-directed anti-SARS-CoV-2 scFv engineered against the key spike protein region could block membrane fusion.
Protein Sci., 32, 2023
2WTL
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BU of 2wtl by Molmil
Crystal structure of BfrA from M. tuberculosis
Descriptor: BACTERIOFERRITIN, FE (III) ION, UNKNOWN ATOM OR ION, ...
Authors:Gupta, V, Gupta, R.K, Khare, G, Salunke, D.M, Tyagi, A.K.
Deposit date:2009-09-17
Release date:2009-12-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal Structure of Bfra from Mycobacterium Tuberculosis:Incorporation of Selenomethionine Results in Cleavage and Demetallation of Haem
Plos One, 4, 2009
2Y06
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BU of 2y06 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE ANTI-(4-HYDROXY-3-NITROPHENYL) - ACETYL MURINE GERMLINE ANTIBODY BBE6.12H3 FAB FRAGMENT IN COMPLEX WITH A PHAGE DISPLAY DERIVED DODECAPEPTIDE GDPRPSYISHLL
Descriptor: ANTI-NP MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3, HEAVY CHAIN, LIGHT CHAIN, ...
Authors:Khan, T, Salunke, D.M.
Deposit date:2010-11-30
Release date:2011-12-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Elucidation of the Mechanistic Basis of Degeneracy in the Primary Humoral Response.
J.Immunol., 188, 2012
3L2Z
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BU of 3l2z by Molmil
Crystal structure of hydrated Biotin Protein Ligase from M. tuberculosis
Descriptor: BirA bifunctional protein
Authors:Gupta, V, Gupta, R.K, Khare, G, Salunke, D.M, Tyagi, A.K.
Deposit date:2009-12-16
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural ordering of disordered ligand-binding loops of biotin protein ligase into active conformations as a consequence of dehydration.
Plos One, 5, 2010
5YJS
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BU of 5yjs by Molmil
Structure of vicilin from Capsicum annuum
Descriptor: 2-HYDROXYBENZOIC ACID, CHLORIDE ION, COPPER (I) ION, ...
Authors:Shikhi, M, Nair, D.T, Salunke, D.M.
Deposit date:2017-10-11
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structure-guided identification of function: role ofCapsicum annuumvicilin during oxidative stress.
Biochem. J., 475, 2018
3LP9
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BU of 3lp9 by Molmil
Crystal structure of LS24, A Seed Albumin from Lathyrus sativus
Descriptor: CALCIUM ION, CHLORIDE ION, LS-24, ...
Authors:Gaur, V, Qureshi, I.A, Singh, A, Chanana, V, Salunke, D.M.
Deposit date:2010-02-05
Release date:2010-02-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and functional insights of hemopexin fold protein from grass pea
Plant Physiol., 152, 2010
2A6J
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BU of 2a6j by Molmil
Crystal structure analysis of the anti-arsonate germline antibody 36-65
Descriptor: Germline antibody 36-65 Fab heavy chain, Germline antibody 36-65 Fab light chain
Authors:Sethi, D.K, Agarwal, A, Manivel, V, Rao, K.V, Salunke, D.M.
Deposit date:2005-07-02
Release date:2006-06-13
Last modified:2018-03-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Differential epitope positioning within the germline antibody paratope enhances promiscuity in the primary immune response.
Immunity, 24, 2006
2A6I
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BU of 2a6i by Molmil
Crystal structure analysis of the anti-arsonate germline antibody 36-65 in complex with a phage display derived dodecapeptide KLASIPTHTSPL
Descriptor: Dodecapeptide: KLASIPTHTSPL, Germline antibody 36-65 Fab heavy chain, Germline antibody 36-65 Fab light chain
Authors:Sethi, D.K, Agarwal, A, Manivel, V, Rao, K.V, Salunke, D.M.
Deposit date:2005-07-02
Release date:2006-06-13
Last modified:2018-03-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Differential epitope positioning within the germline antibody paratope enhances promiscuity in the primary immune response.
Immunity, 24, 2006
2A6D
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BU of 2a6d by Molmil
Crystal structure analysis of the anti-arsonate germline antibody 36-65 in complex with a phage display derived dodecapeptide RLLIADPPSPRE
Descriptor: Dodecapeptide, RLLIADPPSPRE, Germline antibody 36-65 Fab Heavy chain, ...
Authors:Sethi, D.K, Agarwal, A, Manivel, V, Rao, K.V, Salunke, D.M.
Deposit date:2005-07-02
Release date:2006-06-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Differential epitope positioning within the germline antibody paratope enhances promiscuity in the primary immune response.
Immunity, 24, 2006
2A6K
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BU of 2a6k by Molmil
Crystal Structure Analysis of the germline antibody 36-65 Fab in complex with the dodecapeptide SLGDNLTNHNLR
Descriptor: DODECAPEPTIDE: SLGDNLTNHNLR, Germline antibody 36-65 Fab heavy chain, Germline antibody 36-65 Fab light chain
Authors:Sethi, D.K, Agarwal, A, Manivel, V, Rao, K.V, Salunke, D.M.
Deposit date:2005-07-03
Release date:2006-06-13
Last modified:2018-03-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Differential epitope positioning within the germline antibody paratope enhances promiscuity in the primary immune response.
Immunity, 24, 2006
8H73
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BU of 8h73 by Molmil
Crystal structure of antibody scFv against M2e Influenza peptide
Descriptor: CITRATE ANION, Single Chain Variable Fragment
Authors:Kumar, U, Madni, Z.K, Gaur, V, Salunke, D.M.
Deposit date:2022-10-18
Release date:2023-08-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:A structure and knowledge-based combinatorial approach to engineering universal scFv antibodies against influenza M2 protein.
J.Biomed.Sci., 30, 2023
8H3B
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BU of 8h3b by Molmil
Crystal structure of antibody scFv against M2e Influenza peptide
Descriptor: GLYCEROL, Single Chain Variable Fragment
Authors:Kumar, U, Madni, Z.K, Gaur, V, Salunke, D.M.
Deposit date:2022-10-08
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A structure and knowledge-based combinatorial approach to engineering universal scFv antibodies against influenza M2 protein.
J.Biomed.Sci., 30, 2023
8H3C
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BU of 8h3c by Molmil
Crystal structure of M2e Influenza peptide in complex with antibody scFv
Descriptor: Matrix protein 2, Single Chain Variable Fragment
Authors:Kumar, U, Madni, Z.K, Gaur, V, Salunke, D.M.
Deposit date:2022-10-08
Release date:2023-08-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:A structure and knowledge-based combinatorial approach to engineering universal scFv antibodies against influenza M2 protein.
J.Biomed.Sci., 30, 2023
8IA6
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BU of 8ia6 by Molmil
Crystal structure of scFv antibody against Phospholipase A2 of Echis carinatus venom
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, scFv antibody
Authors:Kumar, A, Madni, Z.K, Salunke, D.M.
Deposit date:2023-02-07
Release date:2024-02-14
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of scFv antibody against Phospholipase A2 of Echis carinatus venom
To Be Published
6JBP
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BU of 6jbp by Molmil
Structure of MP-4 from Mucuna pruriens at 2.22 Angstroms
Descriptor: Kunitz-type trypsin inhibitor-like 2 protein
Authors:Jain, A, Shikhi, M, Kumar, A, Kumar, A, Nair, D.T, Salunke, D.M.
Deposit date:2019-01-26
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.217 Å)
Cite:The structure of MP-4 from Mucuna pruriens at 2.22 angstrom resolution.
Acta Crystallogr.,Sect.F, 76, 2020
2Y07
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BU of 2y07 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE ANTI-(4-HYDROXY-3-NITROPHENYL) - ACETYL MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3 FAB FRAGMENT IN COMPLEX WITH A PHAGE DISPLAY DERIVED DODECAPEPTIDE PPYPAWHAPGNI
Descriptor: ANTI-NP MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3, HEAVY CHAIN, LIGHT CHAIN, ...
Authors:Khan, T, Salunke, D.M.
Deposit date:2010-11-30
Release date:2011-12-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Elucidation of the Mechanistic Basis of Degeneracy in the Primary Humoral Response.
J.Immunol., 188, 2012
2Y36
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BU of 2y36 by Molmil
Crystal structure analysis of the anti-(4-hydroxy-3-nitrophenyl)- acetyl murine germline antibody BBE6.12H3 Fab fragment in complex with a phage display derived dodecapeptide DLWTTAIPTIPS
Descriptor: ANTI-NP MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3, DODECAPEPTIDE (DLWTTAIPTIPS)
Authors:Khan, T, Salunke, D.M.
Deposit date:2010-12-18
Release date:2011-12-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Elucidation of the Mechanistic Basis of Degeneracy in the Primary Humoral Response.
J.Immunol., 188, 2012
2XZQ
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BU of 2xzq by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE ANTI-(4-HYDROXY-3-NITROPHENYL)- ACETYL MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3 FAB FRAGMENT IN COMPLEX WITH A PHAGE DISPLAY DERIVED DODECAPEPTIDE YQLRPNAETLRF
Descriptor: ANTI-NP MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3, HEAVY CHAIN, LIGHT CHAIN, ...
Authors:Khan, T, Salunke, D.M.
Deposit date:2010-12-01
Release date:2011-12-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Elucidation of the Mechanistic Basis of Degeneracy in the Primary Humoral Response.
J.Immunol., 188, 2012
1PXD
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BU of 1pxd by Molmil
Crystal structure of the complex of jacalin with meso-tetrasulphonatophenylporphyrin.
Descriptor: 5,10,15,20-TETRAKIS(4-SULPFONATOPHENYL)-21H,23H-PORPHINE, Agglutinin alpha chain, Agglutinin beta-3 chain
Authors:Goel, M, Anuradha, P, Kaur, K.J, Maiya, B.G, Swamy, M.J, Salunke, D.M.
Deposit date:2003-07-03
Release date:2004-02-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Porphyrin binding to jacalin is facilitated by the inherent plasticity of the carbohydrate-binding site: novel mode of lectin-ligand interaction.
Acta Crystallogr.,Sect.D, 60, 2004
6IWO
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BU of 6iwo by Molmil
Structural insight into probable lipid transfer mechanism of non-specific lipid transfer protein via intermediate structures in Solanum melongena
Descriptor: GLYCEROL, MYRISTIC ACID, Non-specific lipid-transfer protein, ...
Authors:Madni, Z.K, Salunke, D.M.
Deposit date:2018-12-05
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural insights into the lipid transfer mechanism of a non-specific lipid transfer protein.
Plant J., 102, 2020
6IX1
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BU of 6ix1 by Molmil
Structure of 2S albumin seed protein from Dolichos
Descriptor: 2S Albumin protein, SULFATE ION
Authors:Sharma, S.C, Kumar, A, Salunke, D.M.
Deposit date:2018-12-08
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:High resolution structural and functional analysis of a hemopexin motif protein from Dolichos.
Sci Rep, 9, 2019
6IWM
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BU of 6iwm by Molmil
Structural insight into probable lipid transfer mechanism of non-specific lipid transfer protein via intermediate structures in Solanum melongena
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Non-specific lipid-transfer protein, ...
Authors:Madni, Z.K, Salunke, D.M.
Deposit date:2018-12-05
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural insights into the lipid transfer mechanism of a non-specific lipid transfer protein.
Plant J., 102, 2020

 

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