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2RSL
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BU of 2rsl by Molmil
REFINEMENT OF GAMMA DELTA RESOLVASE REVEALS A STRIKINGLY FLEXIBLE MOLECULE
Descriptor: GAMMA DELTA-RESOLVASE, SULFATE ION
Authors:Rice, P.A, Steitz, T.A.
Deposit date:1993-09-08
Release date:1994-04-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Refinement of gamma delta resolvase reveals a strikingly flexible molecule.
Structure, 2, 1994
1IHF
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BU of 1ihf by Molmil
INTEGRATION HOST FACTOR/DNA COMPLEX
Descriptor: CADMIUM ION, DNA (35-MER), DNA (5'-D(*GP*CP*TP*TP*AP*TP*CP*AP*AP*TP*TP*TP*GP*TP*TP*GP*C P*AP*CP*C)-3'), ...
Authors:Rice, P.A, Yang, S.-W, Mizuuchi, K, Nash, H.A.
Deposit date:1996-08-21
Release date:1997-02-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn.
Cell(Cambridge,Mass.), 87, 1996
1P4E
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BU of 1p4e by Molmil
Flpe W330F mutant-DNA Holliday Junction Complex
Descriptor: 33-MER, 5'-D(*TP*AP*AP*GP*TP*TP*CP*CP*TP*AP*TP*TP*C)-3', 5'-D(*TP*TP*TP*AP*AP*AP*AP*GP*AP*AP*TP*AP*GP*GP*AP*AP*CP*TP*TP*C)-3', ...
Authors:Rice, P.A, Chen, Y.
Deposit date:2003-04-23
Release date:2003-05-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The role of the conserved Trp330 in Flp-mediated recombination. Functional and structural analysis
J.Biol.Chem., 278, 2003
1GDR
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BU of 1gdr by Molmil
MODEL FOR A DNA MEDIATED SYNAPTIC COMPLEX SUGGESTED BY CRYSTAL PACKING OF GAMMA DELTA RESOLVASE SUBUNITS
Descriptor: GAMMA DELTA-RESOLVASE
Authors:Rice, P.A, Steitz, T.A.
Deposit date:1993-08-31
Release date:1994-04-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Model for a DNA-mediated synaptic complex suggested by crystal packing of gamma delta resolvase subunits.
EMBO J., 13, 1994
6BTC
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BU of 6btc by Molmil
SCCmec type IV LP1413 - nucleic acids binding protein
Descriptor: LP1413 - SCCmec type IV-encoded DNA binding protein
Authors:Rice, P.A, Mir-Sanchis, I.
Deposit date:2017-12-06
Release date:2018-07-25
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.1774075 Å)
Cite:Crystal Structure of an Unusual Single-Stranded DNA-Binding Protein Encoded by Staphylococcal Cassette Chromosome Elements.
Structure, 26, 2018
5DGK
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BU of 5dgk by Molmil
SCCmec type IV Cch - active helicase
Descriptor: Active helicase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Rice, P.A, Mir-Sanchis, I.
Deposit date:2015-08-27
Release date:2016-08-24
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (2.895 Å)
Cite:Staphylococcal SCCmec elements encode an active MCM-like helicase and thus may be replicative.
Nat.Struct.Mol.Biol., 23, 2016
2NP2
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BU of 2np2 by Molmil
Hbb-DNA complex
Descriptor: 36-MER, Hbb
Authors:Rice, P.A, Mouw, K.W.
Deposit date:2006-10-26
Release date:2007-02-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Shaping the Borrelia burgdorferi genome: crystal structure and binding properties of the DNA-bending protein Hbb.
Mol.Microbiol., 63, 2007
2R0Q
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BU of 2r0q by Molmil
Crystal structure of a serine recombinase- DNA regulatory complex
Descriptor: 31-MER, Putative transposon Tn552 DNA-invertase bin3, SULFATE ION
Authors:Rice, P.A, Mouw, K.W.
Deposit date:2007-08-21
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Architecture of a serine recombinase-DNA regulatory complex.
Mol.Cell, 30, 2008
8SH5
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BU of 8sh5 by Molmil
Crystal structure of 3'cap-independent translation enhancers (CITE) from Pea enation mosaic virus RNA 2 (PEMV2) with Fab BL3-6K170A
Descriptor: Fab BL3-6K170A heavy chain, Fab BL3-6K170A light chain, RNA (88-MER)
Authors:Lewicka, A, Roman, C, Rice, P.A, Piccirilli, J.A.
Deposit date:2023-04-13
Release date:2023-08-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of a cap-independent translation enhancer RNA.
Nucleic Acids Res., 51, 2023
6NY9
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BU of 6ny9 by Molmil
Alpha/beta hydrolase domain-containing protein 10 from mouse
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Mycophenolic acid acyl-glucuronide esterase, mitochondrial, ...
Authors:Cao, Y, Rice, P.A, Dickinson, B.C.
Deposit date:2019-02-11
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:ABHD10 is an S-depalmitoylase affecting redox homeostasis through peroxiredoxin-5.
Nat.Chem.Biol., 15, 2019
4FCY
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BU of 4fcy by Molmil
Crystal structure of the bacteriophage Mu transpososome
Descriptor: DNA (13-MER), DNA (49-MER), DNA (68-MER), ...
Authors:Montano, S.P, Pigli, Y.Z, Rice, P.A.
Deposit date:2012-05-25
Release date:2012-11-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.706 Å)
Cite:The Mu transpososome structure sheds light on DDE recombinase evolution.
Nature, 491, 2012
3HVT
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BU of 3hvt by Molmil
STRUCTURAL BASIS OF ASYMMETRY IN THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE HETERODIMER
Descriptor: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51), HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66)
Authors:Steitz, T.A, Smerdon, S.J, Jaeger, J, Wang, J, Kohlstaedt, L.A, Chirino, A.J, Friedman, J.M, Rice, P.A.
Deposit date:1994-07-25
Release date:1994-10-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the binding site for nonnucleoside inhibitors of the reverse transcriptase of human immunodeficiency virus type 1.
Proc.Natl.Acad.Sci.Usa, 91, 1994
4Q9Q
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BU of 4q9q by Molmil
Crystal structure of an RNA aptamer bound to bromo-ligand analog in complex with Fab
Descriptor: (5Z)-5-(3-bromobenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one, Fab BL3-6, HEAVY CHAIN, ...
Authors:Huang, H, Suslov, N.B, Li, N.-S, Shelke, S.A, Evans, M.E, Koldobskaya, Y, Rice, P.A, Piccirilli, J.A.
Deposit date:2014-05-01
Release date:2014-06-18
Last modified:2017-07-26
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:A G-quadruplex-containing RNA activates fluorescence in a GFP-like fluorophore.
Nat.Chem.Biol., 10, 2014
4Q9R
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BU of 4q9r by Molmil
Crystal structure of an RNA aptamer bound to trifluoroethyl-ligand analog in complex with Fab
Descriptor: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2-methyl-3-(2,2,2-trifluoroethyl)-3,5-dihydro-4H-imidazol-4-one, Fab BL3-6, HEAVY CHAIN, ...
Authors:Huang, H, Suslov, N.B, Li, N.-S, Shelke, S.A, Evans, M.E, Koldobskaya, Y, Rice, P.A, Piccirilli, J.A.
Deposit date:2014-05-01
Release date:2014-06-18
Last modified:2017-07-26
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:A G-quadruplex-containing RNA activates fluorescence in a GFP-like fluorophore.
Nat.Chem.Biol., 10, 2014
4R4P
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BU of 4r4p by Molmil
Crystal Structure of the VS ribozyme-A756G mutant
Descriptor: MAGNESIUM ION, VS ribozyme RNA
Authors:Piccirilli, J.A, Suslov, N.B, Dasgupta, S, Huang, H, Lilley, D.M.J, Rice, P.A.
Deposit date:2014-08-19
Release date:2015-09-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Crystal structure of the Varkud satellite ribozyme.
Nat.Chem.Biol., 11, 2015
4R4V
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BU of 4r4v by Molmil
Crystal structure of the VS ribozyme - G638A mutant
Descriptor: MAGNESIUM ION, POTASSIUM ION, VS ribozyme RNA
Authors:Piccirilli, J.A, Suslov, N.B, Dasgupta, S, Huang, H, Lilley, D.M.J, Rice, P.A.
Deposit date:2014-08-19
Release date:2015-09-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Crystal structure of the Varkud satellite ribozyme.
Nat.Chem.Biol., 11, 2015
5C35
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BU of 5c35 by Molmil
Constitutively active Sin recombinase cataltyic domain - T77II100T/Q115R
Descriptor: Recombinase Sin, SULFATE ION
Authors:Trejo, C.S, Rice, P.A.
Deposit date:2015-06-16
Release date:2016-12-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Snapshots of a molecular swivel in action
Nucleic Acids Res., 2018
5CY2
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BU of 5cy2 by Molmil
Tn3 resolvase - site III complex crystal form II
Descriptor: DNA (27-MER), Transposon Tn3 resolvase
Authors:Montano, P.S, Rice, P.A.
Deposit date:2015-07-30
Release date:2017-01-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structures of resolvase - accessory site complexes
To Be Published
5CY1
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BU of 5cy1 by Molmil
Tn3 resolvase - site III complex crystal form I
Descriptor: DNA (30-MER), Transposon Tn3 resolvase
Authors:Montano, S.P, Rice, P.A.
Deposit date:2015-07-30
Release date:2017-01-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Tn3 resolvase - accessory site complexes: DNA geometry dictates complex geometry
To Be Published
5C32
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BU of 5c32 by Molmil
Constitutively active Sin recombinase cataltyic domain - I100T
Descriptor: Putative transposon Tn552 DNA-invertase bin3, SULFATE ION
Authors:Trejo, C.S, Rice, P.A.
Deposit date:2015-06-16
Release date:2016-12-21
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (3.053 Å)
Cite:Snapshots of a molecular swivel in action
Nucleic Acids Res., 2018
5C31
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BU of 5c31 by Molmil
Constitutively active Sin recombinase catalytic domain reveals two rotational intermediates
Descriptor: SULFATE ION, Sin, putative plasmid resolvase dimer
Authors:Trejo, C.S, Rice, P.A.
Deposit date:2015-06-16
Release date:2016-12-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Snapshots of a molecular swivel in action
Nucleic Acids Res., 2018
1YFH
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BU of 1yfh by Molmil
wt Human O6-Alkylguanine-DNA Alkyltransferase Bound To DNA Containing an Alkylated Cytosine
Descriptor: 5'-D(*CP*CP*TP*AP*CP*AP*CP*AP*CP*AP*TP*CP*CP*AP*CP*A)-3', 5'-D(*GP*TP*GP*GP*AP*TP*GP*(XCY)P*GP*TP*GP*TP*AP*GP*GP*T)-3', Methylated-DNA--protein-cysteine methyltransferase, ...
Authors:Duguid, E.M, Rice, P.A, He, C.
Deposit date:2004-12-31
Release date:2005-12-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:The structure of the human AGT protein bound to DNA and its implications for damage detection.
J.Mol.Biol., 350, 2005
5C34
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BU of 5c34 by Molmil
Constitutively active Sin recombinase cataltyic domain - I100T/Q115R
Descriptor: Putative transposon Tn552 DNA-invertase bin3, SULFATE ION
Authors:Trejo, C.S, Rice, P.A.
Deposit date:2015-06-16
Release date:2016-12-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.655 Å)
Cite:Snapshots of a molecular swivel in action
Nucleic Acids Res., 2018
3PKZ
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BU of 3pkz by Molmil
Structural basis for catalytic activation of a serine recombinase
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Recombinase Sin, ...
Authors:Keenholtz, R.A, Boocock, M.R, Rowland, S.J, Stark, W.M, Rice, P.A.
Deposit date:2010-11-12
Release date:2011-06-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for catalytic activation of a serine recombinase.
Structure, 19, 2011
3HSE
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BU of 3hse by Molmil
Crystal structure of Staphylococcus aureus protein SarZ in reduced form
Descriptor: HTH-type transcriptional regulator sarZ
Authors:Poor, C.B, Duguid, E, Rice, P.A, He, C.
Deposit date:2009-06-10
Release date:2009-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of the reduced, sulfenic acid, and mixed disulfide forms of SarZ, a redox active global regulator in Staphylococcus aureus.
J.Biol.Chem., 284, 2009

 

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