Entry Database : PDB / ID : 3c4b Structure visualization Downloads & linksTitle Structure of RNaseIIIb and dsRNA binding domains of mouse Dicer ComponentsEndoribonuclease Dicer Dicer Details Keywords HYDROLASE / RNase / dsRNA binding protein / ATP-binding / Endonuclease / Helicase / Nuclease / Nucleotide-binding / Phosphoprotein / RNA-binding / RNA-mediated gene silencingFunction / homology Function and homology informationFunction Domain/homology Component
regulation of muscle cell apoptotic process / myoblast differentiation involved in skeletal muscle regeneration / MicroRNA (miRNA) biogenesis / Small interfering RNA (siRNA) biogenesis / ganglion development / regulation of enamel mineralization / hair follicle cell proliferation / zygote asymmetric cell division / regulation of oligodendrocyte differentiation / cardiac neural crest cell development involved in outflow tract morphogenesis ... regulation of muscle cell apoptotic process / myoblast differentiation involved in skeletal muscle regeneration / MicroRNA (miRNA) biogenesis / Small interfering RNA (siRNA) biogenesis / ganglion development / regulation of enamel mineralization / hair follicle cell proliferation / zygote asymmetric cell division / regulation of oligodendrocyte differentiation / cardiac neural crest cell development involved in outflow tract morphogenesis / positive regulation of endothelial cell-matrix adhesion via fibronectin / positive regulation of establishment of endothelial barrier / olfactory bulb interneuron differentiation / positive regulation of hepatic stellate cell proliferation / trophectodermal cell proliferation / regulation of miRNA metabolic process / regulation of odontogenesis of dentin-containing tooth / regulation of RNA metabolic process / spermatogonial cell division / peripheral nervous system myelin formation / regulation of epithelial cell differentiation / regulation of regulatory T cell differentiation / global gene silencing by mRNA cleavage / pre-miRNA binding / pericentric heterochromatin formation / spinal cord motor neuron differentiation / regulation of Notch signaling pathway / epidermis morphogenesis / negative regulation of Schwann cell proliferation / positive regulation of myelination / reproductive structure development / ribonuclease III / deoxyribonuclease I activity / apoptotic DNA fragmentation / inner ear receptor cell development / meiotic spindle organization / nerve development / RISC-loading complex / positive regulation of Schwann cell differentiation / regulatory ncRNA-mediated post-transcriptional gene silencing / RISC complex assembly / miRNA processing / pre-miRNA processing / ribonuclease III activity / intestinal epithelial cell development / siRNA processing / regulation of stem cell differentiation / siRNA binding / mRNA stabilization / anatomical structure development / digestive tract development / regulation of viral genome replication / RISC complex / embryonic hindlimb morphogenesis / miRNA binding / cartilage development / cardiac muscle cell development / embryonic limb morphogenesis / positive regulation of vascular endothelial cell proliferation / regulation of myelination / positive regulation of miRNA metabolic process / regulation of neuron differentiation / negative regulation of glial cell proliferation / hair follicle morphogenesis / stem cell population maintenance / branching morphogenesis of an epithelial tube / postsynaptic density, intracellular component / negative regulation of tumor necrosis factor production / regulation of neurogenesis / hair follicle development / endoplasmic reticulum-Golgi intermediate compartment / negative regulation of tumor necrosis factor-mediated signaling pathway / positive regulation of collagen biosynthetic process / spindle assembly / RNA processing / RNA endonuclease activity / spleen development / post-embryonic development / neuron projection morphogenesis / positive regulation of endothelial cell migration / helicase activity / lung development / regulation of protein phosphorylation / multicellular organism growth / cerebral cortex development / rRNA processing / double-stranded RNA binding / gene expression / growth cone / regulation of inflammatory response / regulation of gene expression / defense response to virus / angiogenesis / cell population proliferation / regulation of cell cycle / axon / protein domain specific binding / negative regulation of gene expression / dendrite / glutamatergic synapse Similarity search - Function Ribonuclease III domain / Ribonuclease iii, N-terminal Endonuclease Domain; Chain A / Dicer, double-stranded RNA-binding domain / : / Dicer, partner-binding domain / Dicer, dsRNA-binding domain / Ribonuclease III / : / Dicer, platform domain / Dicer dimerisation domain ... Ribonuclease III domain / Ribonuclease iii, N-terminal Endonuclease Domain; Chain A / Dicer, double-stranded RNA-binding domain / : / Dicer, partner-binding domain / Dicer, dsRNA-binding domain / Ribonuclease III / : / Dicer, platform domain / Dicer dimerisation domain / Dicer dimerisation domain / Dicer dimerisation domain superfamily / Dicer double-stranded RNA-binding fold domain profile. / Ribonuclease III family signature. / Ribonuclease III domain / Ribonuclease III family domain profile. / Ribonuclease III family / Ribonuclease III domain / PAZ domain superfamily / PAZ / PAZ domain / PAZ domain / Double Stranded RNA Binding Domain - #20 / PAZ domain profile. / Helicase/UvrB, N-terminal / Type III restriction enzyme, res subunit / Double-stranded RNA binding motif / Ribonuclease III, endonuclease domain superfamily / Double stranded RNA-binding domain (dsRBD) profile. / Double-stranded RNA-binding domain / Double Stranded RNA Binding Domain / Helicase conserved C-terminal domain / helicase superfamily c-terminal domain / Superfamilies 1 and 2 helicase C-terminal domain profile. / Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. / DEAD-like helicases superfamily / Helicase, C-terminal / Helicase superfamily 1/2, ATP-binding domain / P-loop containing nucleoside triphosphate hydrolase / 2-Layer Sandwich / Orthogonal Bundle / Mainly Alpha / Alpha Beta Similarity search - Domain/homologyBiological species Mus musculus (house mouse)Method X-RAY DIFFRACTION / SYNCHROTRON / Resolution : 1.68 Å DetailsAuthors Lee, J.K. / Du, Z. / Tjhen, R.J. / Stroud, R.M. / James, T.L. CitationJournal : Proc.Natl.Acad.Sci.Usa / Year : 2008Title : Structural and biochemical insights into the dicing mechanism of mouse Dicer: A conserved lysine is critical for dsRNA cleavage.Authors : Du, Z. / Lee, J.K. / Tjhen, R. / Stroud, R.M. / James, T.L. History Deposition Jan 29, 2008 Deposition site : RCSB / Processing site : RCSBRevision 1.0 Feb 19, 2008 Provider : repository / Type : Initial releaseRevision 1.1 Jul 13, 2011 Group : Advisory / Version format compliance
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