+Open data
-Basic information
Entry | Database: PDB / ID: 2b0u | ||||||
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Title | The Structure of the Follistatin:Activin Complex | ||||||
Components |
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Keywords | SIGNALING PROTEIN / activin / follistatin / TGF-beta / morphogen / inhibin | ||||||
Function / homology | Function and homology information activin receptor antagonist activity / activin A complex / inhibin A complex / cardiac fibroblast cell development / regulation of follicle-stimulating hormone secretion / negative regulation of B cell differentiation / positive regulation of ovulation / GABAergic neuron differentiation / Antagonism of Activin by Follistatin / negative regulation of follicle-stimulating hormone secretion ...activin receptor antagonist activity / activin A complex / inhibin A complex / cardiac fibroblast cell development / regulation of follicle-stimulating hormone secretion / negative regulation of B cell differentiation / positive regulation of ovulation / GABAergic neuron differentiation / Antagonism of Activin by Follistatin / negative regulation of follicle-stimulating hormone secretion / progesterone secretion / type II activin receptor binding / striatal medium spiny neuron differentiation / ameloblast differentiation / negative regulation of macrophage differentiation / Glycoprotein hormones / positive regulation of follicle-stimulating hormone secretion / cellular response to oxygen-glucose deprivation / hemoglobin biosynthetic process / positive regulation of hair follicle development / regulation of BMP signaling pathway / gamete generation / cellular response to follicle-stimulating hormone stimulus / cellular response to cholesterol / pattern specification process / Signaling by BMP / activin binding / negative regulation of phosphorylation / activin receptor signaling pathway / heparan sulfate proteoglycan binding / Signaling by Activin / negative regulation of activin receptor signaling pathway / SMAD protein signal transduction / mesodermal cell differentiation / positive regulation of extrinsic apoptotic signaling pathway in absence of ligand / cellular response to angiotensin / positive regulation of transcription by RNA polymerase III / odontogenesis / negative regulation of epithelial cell differentiation / response to aldosterone / hair follicle morphogenesis / negative regulation of G1/S transition of mitotic cell cycle / female gonad development / roof of mouth development / eyelid development in camera-type eye / endodermal cell differentiation / odontogenesis of dentin-containing tooth / peptide hormone binding / positive regulation of SMAD protein signal transduction / negative regulation of type II interferon production / keratinocyte proliferation / hair follicle development / positive regulation of collagen biosynthetic process / BMP signaling pathway / hematopoietic progenitor cell differentiation / extrinsic apoptotic signaling pathway / ovarian follicle development / positive regulation of protein metabolic process / erythrocyte differentiation / positive regulation of erythrocyte differentiation / skeletal system development / cytokine activity / growth factor activity / defense response / hormone activity / negative regulation of cell growth / response to organic cyclic compound / autophagy / cytokine-mediated signaling pathway / male gonad development / cell-cell signaling / nervous system development / cellular response to hypoxia / transcription by RNA polymerase II / cell differentiation / positive regulation of ERK1 and ERK2 cascade / cell surface receptor signaling pathway / positive regulation of protein phosphorylation / negative regulation of cell population proliferation / protein-containing complex binding / positive regulation of gene expression / regulation of transcription by RNA polymerase II / perinuclear region of cytoplasm / positive regulation of DNA-templated transcription / negative regulation of transcription by RNA polymerase II / positive regulation of transcription by RNA polymerase II / extracellular space / extracellular region / identical protein binding / nucleus / cytoplasm Similarity search - Function | ||||||
Biological species | Homo sapiens (human) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MIR / MIRAS / Resolution: 2.8 Å | ||||||
Authors | Thompson, T.B. / Lerch, T.F. / Cook, R.W. / Woodruff, T.K. / Jardetzky, T.S. | ||||||
Citation | Journal: Dev.Cell / Year: 2005 Title: The Structure of the Follistatin:Activin Complex Reveals Antagonism of Both Type I and Type II Receptor Binding. Authors: Thompson, T.B. / Lerch, T.F. / Cook, R.W. / Woodruff, T.K. / Jardetzky, T.S. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2b0u.cif.gz | 161.8 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2b0u.ent.gz | 130.7 KB | Display | PDB format |
PDBx/mmJSON format | 2b0u.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/b0/2b0u ftp://data.pdbj.org/pub/pdb/validation_reports/b0/2b0u | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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-Components
-Protein , 2 types, 4 molecules ABCD
#1: Protein | Mass: 12991.865 Da / Num. of mol.: 2 / Fragment: Activin (mature form) Source method: isolated from a genetically manipulated source Source: (gene. exp.) Homo sapiens (human) / Gene: INHBA / Cell (production host): Ovary / Production host: Cricetulus griseus (Chinese hamster) / References: UniProt: P08476 #2: Protein | Mass: 31592.205 Da / Num. of mol.: 2 / Fragment: Follistatin-288 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Homo sapiens (human) / Gene: FST / Cell (production host): Ovary / Production host: Cricetulus griseus (Chinese hamster) / References: UniProt: P19883 |
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-Non-polymers , 4 types, 151 molecules
#3: Chemical | ChemComp-IR3 / #4: Chemical | ChemComp-MLI / #5: Chemical | ChemComp-MPD / ( | #6: Water | ChemComp-HOH / | |
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-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION / Number of used crystals: 1 |
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-Sample preparation
Crystal | Density Matthews: 2.61 Å3/Da / Density % sol: 52.88 % |
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Crystal grow | Temperature: 295 K / Method: vapor diffusion, hanging drop / pH: 7 Details: PEG 3350, 200 mM Malonate, pH 7.0, vapor diffusion, hanging drop, temperature 295K |
-Data collection
Diffraction | Mean temperature: 100 K |
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Diffraction source | Source: SYNCHROTRON / Site: APS / Beamline: 5ID-B / Wavelength: 0.97923 Å |
Detector | Type: MARRESEARCH / Detector: CCD / Date: Dec 3, 2004 |
Radiation | Protocol: SINGLE WAVELENGTH / Scattering type: x-ray |
Radiation wavelength | Wavelength: 0.97923 Å / Relative weight: 1 |
Reflection | Resolution: 2.8→19.35 Å / Num. all: 23605 / Num. obs: 23416 / % possible obs: 99.2 % / Observed criterion σ(F): 0 / Observed criterion σ(I): 0 |
-Phasing
Phasing | Method: MIRAS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Phasing set |
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Phasing MIR | Resolution: 2.8→29.66 Å / FOM acentric: 0.224 / FOM centric: 0.199 / Reflection acentric: 20139 / Reflection centric: 2620 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Phasing MIR der | Der set-ID: 1 / Resolution: 2.8→29.66 Å
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Phasing MIR der shell |
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