+Open data
-Basic information
Entry | Database: PDB / ID: 1mak | ||||||
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Title | SOLUTION STRUCTURE OF AN ISOLATED ANTIBODY VL DOMAIN | ||||||
Components | IGG2A-KAPPA 26-10 FV (LIGHT CHAIN) | ||||||
Keywords | IMMUNOGLOBULIN | ||||||
Function / homology | Function and homology information immunoglobulin complex / antigen binding / adaptive immune response / immune response / extracellular space Similarity search - Function | ||||||
Biological species | Mus musculus (house mouse) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Constantine, K.L. / Friedrichs, M.S. / Metzler, W.J. / Wittekind, M. / Hensley, P. / Mueller, L. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1994 Title: Solution structure of an isolated antibody VL domain. Authors: Constantine, K.L. / Friedrichs, M.S. / Metzler, W.J. / Wittekind, M. / Hensley, P. / Mueller, L. #1: Journal: To be Published Title: 26-10 Fab: Digoxin Complex-Affinity and Specificity from Surface Complementarity Authors: Jeffrey, P.D. / Strong, R.K. / Sieker, L.C. / Chang, C.Y. / Campbell, R.L. / Petsko, G.A. / Haber, E. / Margolies, M.N. / Sheriff, S. #2: Journal: J.Biomol.NMR / Year: 1993 Title: Aliphatic 1H and 13C Resonance Assignments for the 26-10 Antibody Vl Domain Derived from Heteronuclear Multidimensional NMR Spectroscopy Authors: Constantine, K.L. / Goldfarb, V. / Wittekind, M. / Friedrichs, M.S. / Anthony, J. / Ng, S.-C. / Mueller, L. #3: Journal: Proteins / Year: 1993 Title: Characterization of the Backbone Dynamics of an Anti-Digoxin Antibody Vl Domain by Inverse Detected 1H-15N NMR: Comparisons with X-Ray Data for the Fab Authors: Constantine, K.L. / Friedrichs, M.S. / Goldfarb, V. / Jeffrey, P.D. / Sheriff, S. / Mueller, L. #4: Journal: J.Mol.Biol. / Year: 1993 Title: Production and Characterization of an Antibody Fv Fragment 15N-Labelled in the Vl Domain Only Authors: Goldfarb, V. / Wittekind, M. / Jeffrey, P.D. / Mueller, L. / Constantine, K.L. #5: Journal: Biochemistry / Year: 1992 Title: Sequential 1H and 15N NMR Assignments and Secondary Structure of a Recombinant Anti-Digoxin Antibody Vl Domain Authors: Constantine, K.L. / Goldfarb, V. / Wittekind, M. / Anthony, J. / Ng, S.-C. / Mueller, L. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1mak.cif.gz | 503.9 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1mak.ent.gz | 435.5 KB | Display | PDB format |
PDBx/mmJSON format | 1mak.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1mak_validation.pdf.gz | 354 KB | Display | wwPDB validaton report |
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Full document | 1mak_full_validation.pdf.gz | 464.2 KB | Display | |
Data in XML | 1mak_validation.xml.gz | 28.7 KB | Display | |
Data in CIF | 1mak_validation.cif.gz | 47.8 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ma/1mak ftp://data.pdbj.org/pub/pdb/validation_reports/ma/1mak | HTTPS FTP |
-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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Atom site foot note | 1: CIS PROLINE - PRO 8 MODEL 1 / 2: CIS PROLINE - PRO 100 MODEL 1 / 3: CIS PROLINE - PRO 8 MODEL 2 / 4: CIS PROLINE - PRO 100 MODEL 2 / 5: CIS PROLINE - PRO 8 MODEL 3 / 6: CIS PROLINE - PRO 100 MODEL 3 / 7: CIS PROLINE - PRO 8 MODEL 4 / 8: CIS PROLINE - PRO 100 MODEL 4 / 9: CIS PROLINE - PRO 8 MODEL 5 / 10: CIS PROLINE - PRO 100 MODEL 5 / 11: CIS PROLINE - PRO 8 MODEL 6 / 12: CIS PROLINE - PRO 100 MODEL 6 / 13: CIS PROLINE - PRO 8 MODEL 7 / 14: CIS PROLINE - PRO 100 MODEL 7 / 15: CIS PROLINE - PRO 8 MODEL 8 / 16: CIS PROLINE - PRO 100 MODEL 8 / 17: CIS PROLINE - PRO 8 MODEL 9 / 18: CIS PROLINE - PRO 100 MODEL 9 / 19: CIS PROLINE - PRO 8 MODEL 10 / 20: CIS PROLINE - PRO 100 MODEL 10 / 21: CIS PROLINE - PRO 8 MODEL 11 / 22: CIS PROLINE - PRO 100 MODEL 11 / 23: CIS PROLINE - PRO 8 MODEL 12 / 24: CIS PROLINE - PRO 100 MODEL 12 / 25: CIS PROLINE - PRO 8 MODEL 13 / 26: CIS PROLINE - PRO 100 MODEL 13 / 27: CIS PROLINE - PRO 8 MODEL 14 / 28: CIS PROLINE - PRO 100 MODEL 14 / 29: CIS PROLINE - PRO 8 MODEL 15 / 30: CIS PROLINE - PRO 100 MODEL 15 | |||||||||
NMR ensembles |
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-Components
#1: Antibody | Mass: 12285.821 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Mus musculus (house mouse) / References: UniProt: P01631 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Processing
Software |
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NMR software |
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NMR ensemble | Conformers submitted total number: 15 |