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Yorodumi- PDB-1ahd: DETERMINATION OF THE NMR SOLUTION STRUCTURE OF AN ANTENNAPEDIA HO... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1ahd | ||||||
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Title | DETERMINATION OF THE NMR SOLUTION STRUCTURE OF AN ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX | ||||||
Components |
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Keywords | DNA BINDING PROTEIN/DNA / DNA BINDING PROTEIN-DNA complex | ||||||
Function / homology | Function and homology information specification of segmental identity, thorax / anterior/posterior axis specification / DNA-binding transcription factor activity, RNA polymerase II-specific / DNA binding / nucleus Similarity search - Function | ||||||
Biological species | Drosophila subobscura (fry) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Billeter, M. / Qian, Y.Q. / Otting, G. / Muller, M. / Gehring, W.J. / Wuthrich, K. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1993 Title: Determination of the nuclear magnetic resonance solution structure of an Antennapedia homeodomain-DNA complex. Authors: Billeter, M. / Qian, Y.Q. / Otting, G. / Muller, M. / Gehring, W. / Wuthrich, K. #1: Journal: J.Mol.Biol. / Year: 1993 Title: Nuclear magnetic resonance spectroscopy of a DNA complex with the uniformly 13C-labeled Antennapedia homeodomain and structure determination of the DNA-bound homeodomain Authors: Qian, Y.Q. / Otting, G. / Billeter, M. / Mueller, M. / Gehring, W.J. / Wuthrich, K. #2: Journal: J.Mol.Biol. / Year: 1990 Title: Determination of the Three-Dimensional Structure of the Antennapedia Homeodomain from Drosophila in Solution by 1H Nuclear Magnetic Resonance Spectroscopy Authors: Billeter, M. / Qian, Y.-Q. / Otting, G. / Mueller, M. / Gehring, W.J. / Wuthrich, K. #3: Journal: Embo J. / Year: 1990 Title: Protein-DNA Contacts in the Structure of a Homeodomain-DNA Complex Determined by Nuclear Magnetic Resonance Spectroscopy in Solution Authors: Otting, G. / Qian, Y.Q. / Billeter, M. / Mueller, M. / Affolter, M. / Gehring, W.J. / Wuthrich, K. #4: Journal: Cell(Cambridge,Mass.) / Year: 1989 Title: The Structure of the Antennapedia Homeodomain Determined by NMR Spectroscopy in Solution: Comparison with Prokaryotic Repressors Authors: Qian, Y.-Q. / Billeter, M. / Otting, G. / Mueller, M. / Gehring, W.J. / Wuthrich, K. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1ahd.cif.gz | 751.4 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1ahd.ent.gz | 632.5 KB | Display | PDB format |
PDBx/mmJSON format | 1ahd.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1ahd_validation.pdf.gz | 372.6 KB | Display | wwPDB validaton report |
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Full document | 1ahd_full_validation.pdf.gz | 640.2 KB | Display | |
Data in XML | 1ahd_validation.xml.gz | 24.7 KB | Display | |
Data in CIF | 1ahd_validation.cif.gz | 44.4 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ah/1ahd ftp://data.pdbj.org/pub/pdb/validation_reports/ah/1ahd | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: DNA chain | Mass: 4337.855 Da / Num. of mol.: 1 / Mutation: C39S / Source method: obtained synthetically |
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#2: DNA chain | Mass: 4221.751 Da / Num. of mol.: 1 / Source method: obtained synthetically |
#3: Protein | Mass: 8661.094 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Drosophila subobscura (fry) / Gene: Antp / Organ: FRUIT / Production host: Escherichia coli (E. coli) / References: UniProt: Q24645 |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Crystal grow | *PLUS Method: other / Details: NMR |
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-Processing
Software |
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NMR ensemble | Conformers submitted total number: 16 |