登録情報 | データベース: PDB / ID: 1sg6 |
---|
タイトル | Crystal structure of Aspergillus nidulans 3-dehydroquinate synthase (AnDHQS) in complex with Zn2+ and NAD+, at 1.7D |
---|
要素 | Pentafunctional AROM polypeptide |
---|
キーワード | LYASE (リアーゼ) / SHIKIMATE PATHWAY (シキミ酸経路) / AROMATIC AMINO ACID BIOSYNTHESIS / DHQS / OPEN FORM / FORM J / DOMAIN MOVEMENT / CYCLASE |
---|
機能・相同性 | 機能・相同性情報
3-dehydroquinate synthase / 3-dehydroquinate synthase activity / shikimate kinase / shikimate kinase activity / shikimate dehydrogenase (NADP+) / 3-ホスホシキミ酸-1-カルボキシビニルトランスフェラーゼ / 3-phosphoshikimate 1-carboxyvinyltransferase activity / shikimate 3-dehydrogenase (NADP+) activity / 3-dehydroquinate dehydratase / 3-dehydroquinate dehydratase activity ...3-dehydroquinate synthase / 3-dehydroquinate synthase activity / shikimate kinase / shikimate kinase activity / shikimate dehydrogenase (NADP+) / 3-ホスホシキミ酸-1-カルボキシビニルトランスフェラーゼ / 3-phosphoshikimate 1-carboxyvinyltransferase activity / shikimate 3-dehydrogenase (NADP+) activity / 3-dehydroquinate dehydratase / 3-dehydroquinate dehydratase activity / chorismate biosynthetic process / aromatic amino acid family biosynthetic process / amino acid biosynthetic process / リン酸化 / ATP binding / metal ion binding / 細胞質類似検索 - 分子機能 Pentafunctional AroM protein / Shikimate dehydrogenase, AroM-type / 3-dehydroquinate synthase AroB / 3-dehydroquinate synthase domain / 3-dehydroquinate synthase / 3-dehydroquinate dehydratase, active site / Shikimate kinase, conserved site / Dehydroquinase class I active site. / Shikimate kinase signature. / SDH, C-terminal ...Pentafunctional AroM protein / Shikimate dehydrogenase, AroM-type / 3-dehydroquinate synthase AroB / 3-dehydroquinate synthase domain / 3-dehydroquinate synthase / 3-dehydroquinate dehydratase, active site / Shikimate kinase, conserved site / Dehydroquinase class I active site. / Shikimate kinase signature. / SDH, C-terminal / Shikimate 5'-dehydrogenase C-terminal domain / Shikimate kinase/Threonine synthase-like 1 / Shikimate kinase/gluconokinase / Shikimate kinase / 3-dehydroquinate dehydratase type I / Type I 3-dehydroquinase / Dehydroquinate synthase-like, alpha domain / Dehydroquinate synthase-like - alpha domain / EPSP synthase signature 1. / 3-ホスホシキミ酸-1-カルボキシビニルトランスフェラーゼ / Shikimate dehydrogenase substrate binding, N-terminal / 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site / Shikimate dehydrogenase substrate binding domain / EPSP synthase signature 2. / Rossmann fold - #1970 / Enolpyruvate transferase domain / Enolpyruvate transferase domain superfamily / EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) / RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta / Aminoacid dehydrogenase-like, N-terminal domain superfamily / Aldolase-type TIM barrel / NAD(P)-binding domain superfamily / Up-down Bundle / P-loop containing nucleoside triphosphate hydrolase / ロスマンフォールド / 3-Layer(aba) Sandwich / Mainly Alpha / Alpha Beta類似検索 - ドメイン・相同性 NICOTINAMIDE-ADENINE-DINUCLEOTIDE / Pentafunctional AROM polypeptide類似検索 - 構成要素 |
---|
生物種 | Emericella nidulans (アスペルギルス・ニデュランス) |
---|
手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 1.7 Å |
---|
Model details | Open form with co-factor, crystal form J, derived from turnover experiment. |
---|
データ登録者 | Nichols, C.E. / Hawkins, A.R. / Stammers, D.K. |
---|
引用 | ジャーナル: Acta Crystallogr.,Sect.D / 年: 2004 タイトル: Structure of the 'open' form of Aspergillus nidulans 3-dehydroquinate synthase at 1.7 A resolution from crystals grown following enzyme turnover. 著者: Nichols, C.E. / Hawkins, A.R. / Stammers, D.K. |
---|
履歴 | 登録 | 2004年2月23日 | 登録サイト: RCSB / 処理サイト: RCSB |
---|
改定 1.0 | 2004年8月31日 | Provider: repository / タイプ: Initial release |
---|
改定 1.1 | 2008年4月29日 | Group: Version format compliance |
---|
改定 1.2 | 2011年7月13日 | Group: Version format compliance |
---|
改定 1.3 | 2011年11月16日 | Group: Atomic model |
---|
改定 1.4 | 2023年8月23日 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description カテゴリ: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / pdbx_struct_conn_angle / struct_conn / struct_site Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_struct_conn_angle.ptnr1_auth_comp_id / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr1_label_atom_id / _pdbx_struct_conn_angle.ptnr1_label_comp_id / _pdbx_struct_conn_angle.ptnr1_label_seq_id / _pdbx_struct_conn_angle.ptnr3_auth_comp_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.ptnr3_label_atom_id / _pdbx_struct_conn_angle.ptnr3_label_comp_id / _pdbx_struct_conn_angle.ptnr3_label_seq_id / _pdbx_struct_conn_angle.value / _struct_conn.pdbx_dist_value / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id |
---|
|
---|