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Open data
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Basic information
Entry | Database: SASBDB / ID: SASDB95 |
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![]() | Shigella outer membrane protein IcsA autotransporter
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Function / homology | ![]() cell tip / cell outer membrane / periplasmic space / cell adhesion / cell surface / extracellular region Similarity search - Function |
Biological species | ![]() |
![]() | ![]() Title: The Shigella Virulence Factor IcsA Relieves N-WASP Autoinhibition by Displacing the VCA Domain Authors: Mauricio R / Jeffries C / Svergun D |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
-Models
Model #558 | ![]() Type: dummy / Software: DAMMIN / Radius of dummy atoms: 3.40 A / Chi-square value: 1.858 / P-value: 0.841000 ![]() |
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Model #559 | ![]() Type: dummy / Software: GASBOR / Radius of dummy atoms: 1.90 A / Chi-square value: 1.86 / P-value: 0.841000 ![]() |
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Sample
![]() | Name: Shigella outer membrane protein IcsA autotransporter |
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Buffer | Name: Tris / Concentration: 50.00 mM / pH: 7.4 / Composition: 150 mM NaCl, 10 mM CaCl2, 3% v/v glycerol |
Entity #385 | Name: IcsA / Type: protein / Description: Outer membrane protein IcsA (53-758) / Formula weight: 72.476 / Num. of mol.: 1 / Source: Shigella flexneri / References: UniProt: Q7BCK4 Sequence: TPLSGTQELH FSEDNYEKLL TPVDGLSPLG AGEDGMDAWY ITSSNPSHAS RTKLRINSDI MISAGHGGAG DNNDGNSCGG NGGDSITGSD LSIINQGMIL GGSGGSGADH NGDGGEAVTG DNLFIINGEI ISGGHGGDSY SDSDGGNGGD AVTGVNLPII NKGTISGGNG ...Sequence: TPLSGTQELH FSEDNYEKLL TPVDGLSPLG AGEDGMDAWY ITSSNPSHAS RTKLRINSDI MISAGHGGAG DNNDGNSCGG NGGDSITGSD LSIINQGMIL GGSGGSGADH NGDGGEAVTG DNLFIINGEI ISGGHGGDSY SDSDGGNGGD AVTGVNLPII NKGTISGGNG GNNYGEGDGG NGGDAITGSS LSVINKGTFA GGNGGAAYGY GYDGYGGNAI TGDNLSVINN GAILGGNGGH WGDAINGSNM TIANSGYIIS GKEDDGTQNV AGNAIHITGG NNSLILHEGS VITGDVQVNN SSILKIINND YTGTTPTIEG DLCAGDCTTV SLSGNKFTVS GDVSFGENSS LNLAGISSLE ASGNMSFGNN VKVEAIINNW AQKDYKLLSA DKGITGFSVS NISIINPLLT TGAIDYTKSY ISDQNKLIYG LSWNDTDGDS HGEFNLKENA ELTVSTILAD NLSHHNINSW DGKSLTKSGE GTLILAEKNT YSGFTNINAG ILKMGTVEAM TRTAGVIVNK GATLNFSGMN QTVNTLLNSG TVLINNINAP FLPDPVIVTG NMTLEKNGHV ILNNSSSNVG QTYVQKGNWH GKGGILSLGA VLGNDNSKTD RLEIAGHASG ITYVAVTNEG GSGDKTLEGV QIISTDSSDK NAFIQKGRIV AGSYDYRLKQ GTVSGLNTNK WYLTSQMDNQ ESKQMSNQES TQMSSR |
-Experimental information
Beam | Instrument name: PETRA III P12 / City: Hamburg / 国: Germany ![]() | |||||||||||||||||||||||||||||||||
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Detector | Name: Pilatus 2M | |||||||||||||||||||||||||||||||||
Scan |
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Distance distribution function P(R) |
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Result | Comments: The bead models displayed for IcsA are individual/representative low-resolution structural examples calculated using DAMMIN or GASBOR. A cohort of individual GASBOR and DAMMIN models are ...Comments: The bead models displayed for IcsA are individual/representative low-resolution structural examples calculated using DAMMIN or GASBOR. A cohort of individual GASBOR and DAMMIN models are supplied in the full entry zip archive and include the average DAMMIN-based spatial representation of IcsA in solution (damfilt.pdb; NSD = 0.7). Individual reduced SEC-SAXS data frames/blocks and Rg/I(0) analysis through the IcsA elution peak are included in the full entry zip archive.
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