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- PDB-8t7f: Structure of the S1 variant of Fab F1 -

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データを開く

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基本情報

登録情報

データベース: PDB / ID: 8t7f

タイトル

Structure of the S1 variant of Fab F1

要素

S1 variant of Fab F1 heavy chain
S1 variant of Fab F1 light chain

キーワード

IMMUNE SYSTEM / enhanced crystallization / EphA2 binding / engineered protein / Fab

生物種

Homo sapiens (ヒト)

手法

X線回折 /

シンクロトロン /

分子置換 / 解像度: 3.5 Å

データ登録者

Singer, A.U. / Bruce, H.A. / Enderle, L. / Blazer, L. / Adams, J.J. / Sicheri, F. / Sidhu, S.S.

資金援助

1件

引用

ジャーナル: Protein Sci. / 年: 2024
タイトル: Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
著者: Bruce, H.A. / Singer, A.U. / Filippova, E.V. / Blazer, L.L. / Adams, J.J. / Enderle, L. / Ben-David, M. / Radley, E.H. / Mao, D.Y.L. / Pau, V. / Orlicky, S. / Sicheri, F. / Kurinov, I. / ...

履歴

登録	2023年6月20日	登録サイト: RCSB / 処理サイト: RCSB
改定 1.0	2023年11月22日	Provider: repository / タイプ: Initial release
改定 1.1	2024年1月10日	Group: Database references / カテゴリ: citation / citation_author Item: _citation.journal_volume / _citation.title ..._citation.journal_volume / _citation.title / _citation.year / _citation_author.name
改定 1.2	2024年10月23日	Group: Structure summary カテゴリ: pdbx_entry_details / pdbx_modification_feature Item: _pdbx_entry_details.has_protein_modification

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構造の表示

構造ビューア	分子: MolmilJmol/JSmol

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ダウンロードとリンク

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ダウンロード

PDBx/mmCIF形式	8t7f.cif.gz	1.1 MB	表示	PDBx/mmCIF形式
PDB形式	pdb8t7f.ent.gz	819.5 KB	表示	PDB形式
PDBx/mmJSON形式	8t7f.json.gz		ツリー表示	PDBx/mmJSON形式
その他	その他のダウンロード

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検証レポート

文書・要旨	8t7f_validation.pdf.gz	1.4 MB	表示	wwPDB検証レポート
文書・詳細版	8t7f_full_validation.pdf.gz	1.4 MB	表示
XML形式データ	8t7f_validation.xml.gz	91 KB	表示
CIF形式データ	8t7f_validation.cif.gz	123.2 KB	表示
アーカイブディレクトリ	https://data.pdbj.org/pub/pdb/validation_reports/t7/8t7f ftp://data.pdbj.org/pub/pdb/validation_reports/t7/8t7f	HTTPS FTP

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関連構造データ

関連構造データ	8t58C 8t6iC 8t7gC 8t7iC 8t8iC 8t9yC 8trsC 8trtC 8ts5C 3dvnS C: 同じ文献を引用 (文献) S: 精密化の開始モデル

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リンク

PDBのページ	PDBj / wwPDB / NCBI
「今月の分子」の関連する項目	#21 - 2001年9月抗体 (Antibodies) 類似性 (1) #256 - 2021年4月 SARSコロナウイルス2型のスパイクと抗体 (SARS-CoV-2 Spike and Antibodies) 類似性 (1)

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集合体

登録構造単位

C: S1 variant of Fab F1 heavy chain

G: S1 variant of Fab F1 light chain

A: S1 variant of Fab F1 heavy chain

B: S1 variant of Fab F1 light chain

D: S1 variant of Fab F1 heavy chain

E: S1 variant of Fab F1 light chain

F: S1 variant of Fab F1 heavy chain

H: S1 variant of Fab F1 light chain

I: S1 variant of Fab F1 heavy chain

J: S1 variant of Fab F1 light chain

K: S1 variant of Fab F1 heavy chain

L: S1 variant of Fab F1 light chain

ヘテロ分子

294 kDa, 12 ポリマー
Omokage検索でこの集合体の類似形状データを探す (詳細)

C: S1 variant of Fab F1 heavy chain

G: S1 variant of Fab F1 light chain

ヘテロ分子

登録者が定義した集合体
49 kDa, 2 ポリマー
Omokage検索でこの集合体の類似形状データを探す (詳細)

A: S1 variant of Fab F1 heavy chain

B: S1 variant of Fab F1 light chain

登録者が定義した集合体
48.8 kDa, 2 ポリマー
Omokage検索でこの集合体の類似形状データを探す (詳細)

D: S1 variant of Fab F1 heavy chain

E: S1 variant of Fab F1 light chain

ヘテロ分子

登録者が定義した集合体
49.1 kDa, 2 ポリマー
Omokage検索でこの集合体の類似形状データを探す (詳細)

F: S1 variant of Fab F1 heavy chain

H: S1 variant of Fab F1 light chain

登録者が定義した集合体
48.8 kDa, 2 ポリマー
Omokage検索でこの集合体の類似形状データを探す (詳細)

I: S1 variant of Fab F1 heavy chain

J: S1 variant of Fab F1 light chain

登録者が定義した集合体
48.8 kDa, 2 ポリマー
Omokage検索でこの集合体の類似形状データを探す (詳細)

K: S1 variant of Fab F1 heavy chain

L: S1 variant of Fab F1 light chain

ヘテロ分子

登録者が定義した集合体
48.9 kDa, 2 ポリマー
Omokage検索でこの集合体の類似形状データを探す (詳細)

単位格子

Length a, b, c (Å)	80.757, 189.456, 216.468
Angle α, β, γ (deg.)	90.000, 90.000, 90.000
Int Tables number	19
Space group name H-M	P2₁2₁2₁
Space group name Hall	P2ac2ab
Symmetry operation	#1: x,y,z #2: x+1/2,-y+1/2,-z #3: -x,y+1/2,-z+1/2 #4: -x+1/2,-y,z+1/2

非結晶学的対称性 (NCS)

NCSドメイン:

ID	Ens-ID	詳細
d_1	ens_1	(chain "A" and ((resid 1 through 2 and (name N...
d_2	ens_1	(chain "C" and ((resid 1 through 2 and (name N...
d_3	ens_1	(chain "D" and ((resid 1 through 2 and (name N...
d_4	ens_1	(chain "F" and ((resid 1 through 2 and (name N...
d_5	ens_1	(chain "I" and ((resid 1 through 2 and (name N...
d_6	ens_1	(chain "K" and ((resid 1 through 2 and (name N...
d_1	ens_2	(chain "B" and (resid 4 through 54 or resid 74...
d_2	ens_2	(chain "E" and (resid 4 through 17 or (resid 18...
d_3	ens_2	(chain "G" and (resid 4 through 17 or (resid 18...
d_4	ens_2	(chain "H" and (resid 4 through 23 or (resid 24...
d_5	ens_2	(chain "J" and (resid 4 through 23 or (resid 24...
d_6	ens_2	(chain "L" and (resid 4 through 17 or (resid 18...

NCSドメイン領域:

Dom-ID	Component-ID	Ens-ID	Beg auth comp-ID	Beg label comp-ID	End auth comp-ID	End label comp-ID	Auth asym-ID	Label asym-ID	Auth seq-ID	Label seq-ID
d_1	1	ens_1	GLU	GLU	PRO	PRO	A	C	1 - 150	1 - 142
d_1	2	ens_1	THR	THR	PRO	PRO	A	C	159 - 237	151 - 229
d_2	1	ens_1	GLU	GLU	PRO	PRO	C	A	1 - 150	1 - 142
d_2	2	ens_1	THR	THR	PRO	PRO	C	A	159 - 237	151 - 229
d_3	1	ens_1	GLU	GLU	PRO	PRO	D	E	1 - 150	1 - 142
d_3	2	ens_1	THR	THR	PRO	PRO	D	E	159 - 237	151 - 229
d_4	1	ens_1	GLU	GLU	PRO	PRO	F	G	1 - 150	1 - 142
d_4	2	ens_1	THR	THR	PRO	PRO	F	G	159 - 237	151 - 229
d_5	1	ens_1	GLU	GLU	PRO	PRO	I	I	1 - 150	1 - 142
d_5	2	ens_1	THR	THR	PRO	PRO	I	I	159 - 237	151 - 229
d_6	1	ens_1	GLU	GLU	PRO	PRO	K	K	1 - 150	1 - 142
d_6	2	ens_1	THR	THR	PRO	PRO	K	K	159 - 237	151 - 229
d_1	1	ens_2	MET	MET	ILE	ILE	B	D	4 - 54	4 - 48
d_1	2	ens_2	SER	SER	ARG	ARG	B	D	74 - 229	60 - 213
d_2	1	ens_2	MET	MET	SER	SER	E	F	4 - 26	4 - 26
d_2	2	ens_2	VAL	VAL	ILE	ILE	E	F	29 - 54	29 - 48
d_2	3	ens_2	SER	SER	ARG	ARG	E	F	74 - 229	60 - 213
d_3	1	ens_2	MET	MET	SER	SER	G	B	4 - 26	4 - 26
d_3	2	ens_2	VAL	VAL	ILE	ILE	G	B	29 - 54	29 - 48
d_3	3	ens_2	SER	SER	ARG	ARG	G	B	74 - 229	60 - 213
d_4	1	ens_2	MET	MET	SER	SER	H	H	4 - 26	4 - 26
d_4	2	ens_2	VAL	VAL	ILE	ILE	H	H	29 - 54	29 - 48
d_4	3	ens_2	SER	SER	ARG	ARG	H	H	74 - 229	60 - 213
d_5	1	ens_2	MET	MET	SER	SER	J	J	4 - 26	4 - 26
d_5	2	ens_2	VAL	VAL	ILE	ILE	J	J	29 - 54	29 - 48
d_5	3	ens_2	SER	SER	ARG	ARG	J	J	74 - 229	60 - 213
d_6	1	ens_2	MET	MET	SER	SER	L	L	4 - 26	4 - 26
d_6	2	ens_2	VAL	VAL	ARG	ARG	L	L	29 - 229	29 - 213

NCSアンサンブル:

ID
ens_1
ens_2

NCS oper:

ID	Code	Matrix	ベクター
1	given	(-0.994357398402, 0.105958528353, -0.00511414826382), (0.105980969338, 0.994358703559, -0.00433621899005), (0.00462583845462, -0.00485375382419, -0.999977521094)	-36.9353308606, 2.55181674948, 107.675819678
2	given	(0.991436622514, -0.130545512694, -0.00336045431744), (-0.0700815229741, -0.510172777953, -0.857211943905), (0.11019076039, 0.8501068202, -0.51495280422)	-4.98503007365, -11.5164814898, 115.876387741
3	given	(0.991778346736, -0.0656117097133, 0.109867258521), (-0.127934174442, -0.488745926122, 0.862994940141), (-0.00292539848038, -0.869955471991, -0.493121606499)	-8.41952368174, -104.718413299, 48.3541815939
4	given	(-0.994074057264, 0.0606104568165, -0.090239355042), (0.0458334425366, -0.519040232962, -0.853520083016), (-0.0985700979971, -0.852598152174, 0.513186444374)	-34.5322847959, -9.72074217691, -7.80156738262
5	given	(-0.999516590054, -0.0309823572684, 0.00258452021292), (0.0174029509561, -0.488667471182, 0.872296532096), (-0.0257628318448, 0.871919833555, 0.48897042891)	-42.8770363065, -103.055665571, 60.2092857653
6	given	(0.990689896925, -0.13592198692, 0.00766430703413), (-0.0628612793211, -0.506659744502, -0.859851360913), (0.120755901275, 0.851364267968, -0.510486920043)	-6.522114063, -11.0472940174, 115.785308763
7	given	(-0.993613213307, 0.110912633458, -0.0207646353302), (0.110919557007, 0.993829048129, 0.000821564091854), (0.020727619602, -0.00148688721499, -0.99978405416)	-35.1229959065, 2.27031766154, 108.107229575
8	given	(0.989344006546, -0.0855662742987, 0.11780003996), (-0.14466588854, -0.486365314844, 0.861696327722), (-0.0164382908161, -0.869555744745, -0.493561130333)	-10.1536723969, -104.745123135, 48.1362976472
9	given	(-0.994193344102, 0.051335506372, -0.0945740996685), (0.0532400622214, -0.529110004919, -0.846881395751), (-0.0935151876288, -0.84699897785, 0.523304539635)	-34.2985501494, -10.7650210235, -8.51494009738
10	given	(-0.99963667132, -0.0263080474815, -0.0058661734268), (0.00778733974528, -0.490237718233, 0.871553978226), (-0.0258047029174, 0.871191635784, 0.490264470513)	-41.9840070528, -103.458123162, 60.1180100101

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要素

#1: 抗体	S1 variant of Fab F1 heavy chain 分子量: 25332.188 Da / 分子数: 6 / 由来タイプ: 組換発現 / 詳細: engineered Fab from phage display / 由来: (組換発現) Homo sapiens (ヒト) / プラスミド: pSCSTa / 細胞株 (発現宿主): Expi293 / 発現宿主: Homo sapiens (ヒト)
#2: 抗体	S1 variant of Fab F1 light chain 分子量: 23479.033 Da / 分子数: 6 / Mutation: Q165S, K167Y, Q217A / 由来タイプ: 組換発現詳細: Fab produced by randomization of CDR regions and selected by phage display 由来: (組換発現) Homo sapiens (ヒト) / プラスミド: pSCSTa / 細胞株 (発現宿主): Expi293 / 発現宿主: Homo sapiens (ヒト)
#3: 化合物	ChemComp-EPE / 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID / HEPES / HEPES 分子量: 238.305 Da / 分子数: 2 / 由来タイプ: 合成 / 式: C₈H₁₈N₂O₄S / タイプ: SUBJECT OF INVESTIGATION / コメント: pH緩衝剤*YM
#4: 化合物	ChemComp-SO4 / SULFATE ION / 硫酸ジアニオン分子量: 96.063 Da / 分子数: 2 / 由来タイプ: 合成 / 式: SO₄ / タイプ: SUBJECT OF INVESTIGATION
研究の焦点であるリガンドがあるか	Y
Has protein modification	Y

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実験情報

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実験

実験	手法: X線回折 / 使用した結晶の数: 1

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試料調製

結晶	マシュー密度: 2.83 Å³/Da / 溶媒含有率: 56.49 %
結晶化	温度: 298 K / 手法: 蒸気拡散法, シッティングドロップ法 / pH: 6.5 詳細: 20% PEG3350, 200 mM ammonium sulfate, 100 mM Bis-Tris HCl, pH 6.5

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データ収集

回折	平均測定温度: 100 K / Serial crystal experiment: N
放射光源	由来: シンクロトロン / サイト: APS / ビームライン: 21-ID-E / 波長: 0.97918 Å
検出器	タイプ: DECTRIS EIGER X 16M / 検出器: PIXEL / 日付: 2020年11月24日 / 詳細: Mirrors
放射	プロトコル: SINGLE WAVELENGTH / 単色(M)・ラウエ(L): M / 散乱光タイプ: x-ray
放射波長	波長: 0.97918 Å / 相対比: 1
反射	解像度: 3.5→95.04 Å / Num. obs: 40200 / % possible obs: 93.1 % / 冗長度: 6.7 % / B_iso Wilson estimate: 91.74 Å² / CC_1/2: 0.997 / R_merge(I) obs: 0.178 / R_pim(I) all: 0.074 / R_rim(I) all: 0.193 / Net I/σ(I): 7.9
反射シェル	解像度: 3.5→3.64 Å / 冗長度: 6.7 % / R_merge(I) obs: 1.001 / Mean I/σ(I) obs: 2.1 / Num. unique obs: 4729 / CC_1/2: 0.789 / R_pim(I) all: 0.411 / % possible all: 99

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解析

ソフトウェア

名称	バージョン	分類
PHENIX	1.20.1_4487	精密化
PHENIX	1.20.1_4487	精密化
MOSFLM		データ削減
Aimless		データスケーリング
PHASER		位相決定

精密化

構造決定の手法:

分子置換
開始モデル: PDB entry 3DVN

3dvn

解像度: 3.5→94.73 Å / SU ML: 0.5512 / 交差検証法: FREE R-VALUE / σ(F): 1.34 / 位相誤差: 34.0687
立体化学のターゲット値: GeoStd + Monomer Library + CDL v1.2

	R_factor	反射数	%反射
R_free	0.306	1909	4.81 %
R_work	0.2426	37818	-
obs	0.2457	39727	92.92 %

溶媒の処理

減衰半径: 0.9 Å / VDWプローブ半径: 1.11 Å / 溶媒モデル: FLAT BULK SOLVENT MODEL

原子変位パラメータ

B_iso mean: 96.55 Å²

精密化ステップ

サイクル: LAST / 解像度: 3.5→94.73 Å

	タンパク質	核酸	リガンド	溶媒	全体
原子数	18925	0	40	0	18965

拘束条件

Refine-ID	タイプ	Dev ideal	数
X-RAY DIFFRACTION	f_bond_d	0.0052	19458
X-RAY DIFFRACTION	f_angle_d	0.9964	26655
X-RAY DIFFRACTION	f_chiral_restr	0.0522	3030
X-RAY DIFFRACTION	f_plane_restr	0.0078	3396
X-RAY DIFFRACTION	f_dihedral_angle_d	16.4143	6456

Refine LS restraints NCS

Ens-ID	Dom-ID	Asym-ID	Auth asym-ID	Refine-ID	タイプ	Rms dev position (Å)
ens_1	d_2	C	A	X-RAY DIFFRACTION	Torsion NCS	0.821858333969
ens_1	d_3	C	A	X-RAY DIFFRACTION	Torsion NCS	0.885436182616
ens_1	d_4	C	A	X-RAY DIFFRACTION	Torsion NCS	0.90758503456
ens_1	d_5	C	A	X-RAY DIFFRACTION	Torsion NCS	0.840924331263
ens_1	d_6	C	A	X-RAY DIFFRACTION	Torsion NCS	0.913377162534
ens_2	d_2	D	B	X-RAY DIFFRACTION	Torsion NCS	1.15876365001
ens_2	d_3	D	B	X-RAY DIFFRACTION	Torsion NCS	1.11143077976
ens_2	d_4	D	B	X-RAY DIFFRACTION	Torsion NCS	1.19254338191
ens_2	d_5	D	B	X-RAY DIFFRACTION	Torsion NCS	1.2618909854
ens_2	d_6	D	B	X-RAY DIFFRACTION	Torsion NCS	1.28649475367

LS精密化シェル

解像度 (Å)	R_factor R_free	Num. reflection R_free	R_factor R_work	Num. reflection R_work	Refine-ID	% reflection obs (%)
3.5-3.59	0.4206	139	0.3345	2818	X-RAY DIFFRACTION	99.83
3.59-3.68	0.4154	68	0.3581	1394	X-RAY DIFFRACTION	48.25
3.69-3.79	0.3798	133	0.3538	2764	X-RAY DIFFRACTION	96.92
3.79-3.92	0.4387	91	0.326	1670	X-RAY DIFFRACTION	58.78
3.92-4.06	0.3756	152	0.2998	2841	X-RAY DIFFRACTION	98.32
4.06-4.22	0.352	145	0.2673	2868	X-RAY DIFFRACTION	99.93
4.22-4.41	0.2726	163	0.2381	2850	X-RAY DIFFRACTION	99.87
4.41-4.64	0.2731	148	0.2137	2880	X-RAY DIFFRACTION	99.97
4.64-4.93	0.2762	158	0.2171	2861	X-RAY DIFFRACTION	99.6
4.93-5.31	0.2816	142	0.2229	2924	X-RAY DIFFRACTION	99.9
5.31-5.85	0.3104	128	0.2335	2937	X-RAY DIFFRACTION	99.93
5.85-6.69	0.2864	126	0.257	2953	X-RAY DIFFRACTION	99.84
6.69-8.43	0.3059	151	0.2356	2960	X-RAY DIFFRACTION	99.9
8.43-94.73	0.261	165	0.1847	3098	X-RAY DIFFRACTION	99.21

精密化 TLS

手法: refined / Refine-ID: X-RAY DIFFRACTION

ID	L11 (°²)	L12 (°²)	L13 (°²)	L22 (°²)	L23 (°²)	L33 (°²)	S11 (Å °)	S12 (Å °)	S13 (Å °)	S21 (Å °)	S22 (Å °)	S23 (Å °)	S31 (Å °)	S32 (Å °)	S33 (Å °)	T11 (Å²)	T12 (Å²)	T13 (Å²)	T22 (Å²)	T23 (Å²)	T33 (Å²)	Origin x (Å)	Origin y (Å)	Origin z (Å)
1	2.81027558531	-1.20850613682	-0.912276491496	4.5334517269	4.06118442361	3.44171803558	-0.36680538168	-0.72846585705	-0.102866555009	0.96715527601	0.688211069815	-0.332272471755	0.982187125799	1.35253934347	-0.305431748139	0.643631032693	0.065148159236	-0.0260106195584	0.868541616664	0.157028170442	0.537058953199	-33.1336932749	-46.9757140522	37.0086947929
2	4.09200925865	-1.97345815166	-2.71755493336	2.81803777098	3.03187570991	6.66808857971	-0.427881069845	0.00924021836302	0.12696071618	-0.208021180958	-0.0189692188868	-0.00754604894758	0.0245878609887	0.175173421999	0.45438826957	0.641733603219	0.00379385136959	-0.0741495413706	0.322539751209	0.103921440365	0.612361294251	-43.0760635743	-44.2320757906	34.5798710003
3	7.66062967009	-3.83386782512	-7.12890757869	2.85757652559	3.56930226251	8.78054466042	-0.0524212151392	0.110577030776	-0.192321567412	0.0132052584293	-0.345842205426	-0.159498092516	-0.00203281318964	-0.0626686046297	0.384739727414	0.433043596538	0.0219376510356	-0.0612210009467	0.47737818604	0.0832743325993	0.543960526811	-40.5019434105	-45.8956712199	33.830321662
4	2.75722264163	-1.48812012291	-1.32082975188	7.4734970053	-0.6893232115	3.85190242064	-0.0289751797281	0.288308056599	0.377888836387	0.155487174678	-0.118645344685	-0.88550445535	-0.279983865267	0.76219578913	0.177387787056	0.521897720036	-0.00657964733054	-0.0752214140909	0.926213779408	0.0484665127711	0.599907392459	-17.7796292305	-41.7388446148	4.65999230682
5	5.1181676112	1.68131391439	-1.87262114085	5.42487100941	-3.1358471994	6.90553290892	0.392924119666	0.149696484276	1.52057253045	0.155558610903	-0.00474513055019	0.548487849989	-1.75712973317	-0.596626641903	-0.372656462323	1.14253894543	0.187854223122	0.126682231755	0.594000166565	0.0169930441195	0.711767246056	-44.3581802879	-26.5137216801	27.5620516328
6	2.1189341647	-0.572438102361	-1.30035785924	5.76604648837	-0.56411424117	7.43960491582	0.299753663513	0.42733508661	0.181071683834	-0.0300971135244	-0.418491731511	-0.372248965673	-0.518193412878	-0.152096208346	0.113588683507	0.427105292225	-0.00739970910659	-0.00800771471149	0.761015899734	0.174950119336	0.498471152127	-31.0467257827	-36.475763619	-2.33961828998
7	5.29761881388	2.63207712659	-1.53980344714	2.11836037818	-1.5600899528	5.72923777761	-0.543315415034	0.36827709928	0.0830635232514	-0.213043967416	0.506677501769	-0.0404477604575	0.478462146754	-1.29747440321	0.158389722426	0.639575574098	-0.128872109186	0.0197845556261	0.914149396708	-0.153013347011	0.612071797287	-11.6790192732	-50.4831860489	76.6858525952
8	6.2967591255	0.862104946736	-2.42713726193	2.57538533551	-1.32513001992	7.98081704453	-0.244363610573	0.700612117343	-0.589474119258	-0.344809421003	0.291479337935	-0.124871962429	-0.0425269230256	-0.88920209637	-0.0465226565357	0.7207638537	-0.0338570171757	-0.0429635679522	0.672111928869	-0.146643943281	0.537062246658	-1.9723596164	-46.5990338726	70.5092194003
9	4.92150035766	-1.88184266323	-4.26463118522	9.16405501767	-4.09960110798	6.9517494705	0.0236958641149	0.684523278795	-0.892016345894	-0.668605282148	-0.777589400353	-0.103268570858	0.745296047321	0.493328909479	0.703116177127	0.594126152994	-0.119327268432	0.118826565581	0.773975691914	-0.153837357918	0.762454180068	-2.85445645833	-54.6570826326	74.7433041543
10	9.24805124961	0.615746672479	-4.7250765387	4.66360841089	-2.21668630107	6.44189268116	0.0868717793232	0.700504465518	0.570213029376	-0.44482525862	-0.239664963947	0.309791196572	0.530355766851	0.683753083162	0.155793543806	0.688500477279	0.098490961442	-0.14543108323	0.801513452693	-0.076108904551	0.501811189801	5.45574400509	-40.784440529	67.2926128466
11	3.6651878665	6.12490916253	-7.4265659289	9.40271721557	-6.12782929261	9.00362100163	0.983401242557	-0.06991849297	0.614294610004	0.299053950637	0.092051685374	1.29460953786	0.218390794547	-0.643349578298	-0.883596125283	0.715823657943	-0.127535262782	-0.109139961536	1.09499952684	0.159221834415	0.72274028336	-12.1220762036	-49.03828558	83.9335434771
12	5.36160009919	-5.85088148644	-4.73363738733	5.7664333662	5.08573175819	4.25608045099	-0.308183330557	-0.0885193371532	0.0964306333066	1.39104049188	-0.236201084412	-0.459512730749	0.862405503159	-0.606948553404	0.228135030041	0.950219179827	-0.0524245430128	0.0150061636847	1.66916629633	-0.123494259745	0.661598701482	-22.6814362567	-42.1806886429	108.189099916
13	8.42293880726	5.12018519131	-0.332879615627	8.17130175203	-1.82776108803	3.98584634046	-1.76148591136	-1.08628239534	1.66875169605	0.0518069379706	2.52869370821	1.45615270697	0.192811345518	-0.770819070468	-0.439298632533	0.965954978893	0.364345838863	-0.102755423555	1.84271800734	-0.0371899982646	0.748788560019	-24.1896189106	-43.7351757859	95.4144661014
14	7.24884170359	-3.76164835866	-3.51336656663	7.58200414989	2.63092021721	1.7994776577	-0.685969486223	-1.1431193261	-0.948635297418	1.77006283823	0.695616118696	1.09462405203	-0.250628784272	0.496930849742	0.0326048819464	0.824634029649	0.0823465905736	-0.108865238949	1.03826866458	0.165492636782	0.643872057164	-17.3689735584	-41.4748794973	99.5554545075
15	4.82079369128	-1.23723500347	-2.72032769962	2.56727429103	2.16865740573	2.1336910103	-0.514437310911	-1.17365267123	0.586526698288	1.30340321271	0.484957259456	1.50759148693	0.335462454632	0.303671931242	0.0612703417093	0.994417462403	-0.0192550983348	-0.0919254426744	1.67131047569	-0.316365843016	1.14680740185	-22.88471265	-36.1917244735	105.656591239
16	9.60471828185	-5.0679498267	-5.35328313654	7.5654658836	2.30081186267	2.69058852185	0.266944581026	0.414582913701	-0.643490495313	-0.383352605561	-1.53157243608	1.92908356742	-1.60613053407	-1.718242432	0.995495153743	0.853208973859	0.0221448375866	-0.00253986525318	1.70742346013	-0.155259389172	0.829902486134	-30.3700141173	-43.0925096922	103.529955585
17	4.40542549856	-1.84378945416	-1.45188527589	2.88458295088	1.14232944276	6.17973220112	0.242862391504	0.175207348664	1.09168365915	-0.295746904397	0.258744734497	-0.909627376034	-1.55840767243	0.0821084033143	-0.475737027068	1.90747947967	-0.150601585188	0.320962952251	0.677639107542	-0.118476584694	1.00818849038	3.14016617046	-26.8942044491	81.6168514231
18	3.16946033402	-1.38144122396	-2.62858938037	1.74047601005	2.86191805716	8.79638800361	0.574770429256	-0.419777545553	-0.0562032900338	-0.558316470078	-0.271157650383	0.100566243512	-2.25453550813	-0.49392792056	-0.344685327742	1.10828487734	-0.0603232704044	-0.155377360656	1.08087152018	-0.0700906040056	0.607352535999	-5.73006389774	-37.7976920543	95.9111760408
19	4.82924019884	1.77509431333	-1.85988485157	7.014338409	0.337292869757	7.93916431049	0.671110623049	-0.852063924247	0.112706936344	0.383152306618	-0.136378770529	-0.7610641603	-1.25231554649	1.184781948	-0.459883235753	0.845969739082	-0.126088730284	0.0454788387047	1.1400484497	-0.12613132445	0.56813119239	-9.62120297495	-37.6602680424	111.565732554
20	2.23685629314	0.610641593138	1.81399287519	5.23659102313	6.41778451198	2.06707139926	-1.33862967401	-0.247806772769	-0.448835995364	-0.381735323437	-1.33622460005	0.906223537075	-1.03175563759	-0.751424735472	2.32807509508	0.453062017474	-0.0242311906608	-0.0702367841753	0.871041958504	0.244677474252	0.709962394307	-10.2249323175	-50.271610628	32.5652988303
21	4.24765298875	2.50492352779	3.61985530151	4.47269686827	4.26528266243	6.12149218468	-0.193575906218	-0.205597095165	0.311860723177	0.0615135176658	-0.335763636528	0.482049987377	-0.343717572669	-0.69264118618	0.511107490201	0.492209754885	0.00154926042557	0.0491563860927	0.531338763967	0.053856567162	0.455254599354	-4.87818837934	-47.2880125816	40.6453481742
22	4.18088136363	2.35786817135	4.2869782132	4.36297075444	3.92009171357	5.68052630728	0.0784791217629	0.276875483349	-0.310201938129	-0.305538591101	-0.106305456683	-0.657544489606	-0.174773475966	0.352194140529	-0.150208674514	0.415022167595	0.0831549501714	0.0848441244695	0.62334682911	0.162762785346	0.484156149669	3.36256325428	-48.8634510052	38.8645924247
23	4.65151885936	3.86995981643	1.97848419579	4.94656605741	0.06182027709	4.40904953037	-0.0778356625728	0.615054946871	0.204950856058	-0.149838139203	0.338397885768	0.482241249259	-0.584034892763	0.611952621035	-0.0696385187118	0.481405752668	0.0104717041302	-0.161339594718	0.593047415934	0.173015825832	0.51996952001	-1.55684572558	-49.0502213226	32.3193246121
24	4.3071630252	3.13873841945	1.92152635343	4.15754244236	1.87160471037	2.17023062725	0.474853402847	-0.297450189864	0.0601025409141	0.471059498541	-0.0508713641159	0.159504730376	0.417430238485	-0.0595667474186	-0.329523313551	0.56525522505	0.124116721939	-0.0223592772084	0.565169501132	0.0354740797914	0.609465249961	5.30494167223	-48.471599373	49.0386209774
25	5.30854591387	2.3630381543	1.01299498957	4.23337868482	1.90234486249	3.07537464582	-0.0637433804166	0.546434249744	-0.282567279212	-0.0818527353696	0.322172719111	0.907473064276	0.250454324455	-0.0909428304778	-0.22323634249	0.640535229431	0.0231308112982	-0.218874720613	0.654440123506	0.16815148009	0.829100352673	-20.2344228769	-72.2704007917	23.0860698054
26	1.90440053788	2.52127547346	-0.262757908436	2.66999516074	-0.577638503727	1.50956715347	1.12110658889	0.554140782089	-1.71271682944	0.299880968998	-0.827623519708	1.19924735305	1.10483036492	-0.242251768635	-0.299898758911	0.73960716013	-0.0546447758107	-0.14397368985	0.967500489568	0.122793466965	1.36706066939	-23.1266379078	-78.2412141076	33.5929818046
27	1.98090508953	1.98409876731	-0.267220305437	4.05631514688	-0.319614107031	2.45453393443	-0.207683094378	0.365716288059	-0.753723548872	-0.513689483808	0.63687798328	0.678241261763	0.608489037154	-0.65865427694	-0.320420381189	0.814114557507	-0.00753961394635	-0.203924692918	0.68288355218	0.187419886605	1.03806925949	-24.8359524915	-76.1620042285	23.8230206985
28	7.71632223639	2.12078354816	0.625030118318	10.0308622821	-1.73905120151	3.21089108399	-0.0139513557197	-1.23487379851	-1.07869082319	0.653735311645	0.112566940944	-0.149546682317	0.386261943841	0.151942640227	-0.110018208246	0.900605272116	0.0805390113467	-0.104376476883	0.742920358575	0.121972913123	0.659021202264	1.04415784064	-67.334341532	51.7069359228
29	1.31386789443	1.63395479549	2.6193978816	3.85972496884	1.53812527458	4.09345310579	0.635402377445	0.505648902318	-1.05141897076	0.132986989526	0.40960897316	-0.582679420689	1.29492963433	0.458060333873	-1.04629215673	0.896620851037	0.194216940937	-0.216061563365	0.682444227673	-0.0823170530846	0.973702689358	-8.63574918392	-82.2164947583	28.7328815862
30	2.1354386011	2.45843135309	1.81373763534	6.46763395582	-0.20429317046	3.19969991063	0.235996150918	-0.453122041305	0.388075556868	0.544815338047	-0.30907113976	1.18088818513	-0.019590845256	-0.542353979646	-0.00202193030265	0.485315028047	0.102163899764	0.0716881381008	0.691097206388	-0.161220003774	0.659089129066	-5.19093570264	-18.0637971825	54.3889620951
31	8.57733370933	-2.40969251864	0.327525549211	4.57008932901	-0.0349571574898	3.61998117587	-0.0559529743496	-1.01673540568	0.884908156799	1.03133627599	0.365317770712	-0.496394363857	-0.352069930748	-0.375358529026	-0.260148156314	0.668505620592	0.143912157607	-0.172561176874	0.665489117546	-0.178921426605	0.569197585712	2.50792681968	-15.7271518479	57.2116910609
32	3.8460803493	-1.97512499042	0.71966294886	6.55730423902	0.775808352095	1.28816886483	0.341653419885	-0.154196240563	0.38748364357	-0.518826101625	-0.312996567056	0.14664577236	0.422368343615	-0.363126689036	-0.0213795281826	0.76709895751	0.062673542732	0.0446719703527	0.616090066631	-0.0815776265619	0.74703252744	0.977159585101	-19.4772158445	50.1937145825
33	3.6809712858	-0.0507100324178	-0.0367722008545	6.30593237689	0.374959815196	3.51689414307	-0.0934262285445	0.0468561255521	0.972169351198	-0.285577489247	-0.0382209637778	0.30461767409	-0.580298220582	-0.530262732737	0.129426085601	0.570743073073	0.115943144659	-0.0539441947558	0.687380438448	-0.0195866609632	0.815292395223	-18.4266845236	7.64789316216	33.8923067131
34	2.89082317287	-0.666449570494	-3.40071128978	2.79570687005	-0.540393685621	6.77658115517	0.996751544351	1.26019858339	0.259325984435	-1.70235436968	-0.604124849223	-0.459360585927	0.585653776118	0.681089793315	-0.385375863301	1.1718473671	0.348178392307	0.019942186881	1.01740554609	0.046723548312	0.593035639398	8.93564397191	-18.9003919299	32.2895835464
35	4.57426897739	-3.73903873585	2.50168567706	8.25234655938	-2.38464680026	3.45063403873	0.913939873331	1.60999841577	-0.652179433334	-0.992793780224	-0.588678182466	0.340421730307	0.340221477598	0.584460486187	-0.198528192197	0.798925763661	0.168278574571	0.0842071758993	1.00189465028	-0.180174356944	0.645836246139	4.50638059836	-22.6216130689	35.1448154209
36	4.96473222041	-2.40407045868	-2.05091824404	6.57769880827	-3.34225719787	6.71141196334	0.539013237364	0.922299971956	1.89368699223	-0.0520164978806	-0.822012421694	-1.72862873667	-0.239060329865	0.188072314489	0.28342323184	0.801502627553	-0.101685333096	-0.187076761737	0.897778992097	0.208711392734	1.14491345523	-6.62087038381	8.11697787395	26.0677900093
37	2.92450745619	-0.772128712228	-3.03923812624	8.85753769282	-4.13918191866	5.29564487884	0.724031832029	-0.325862173427	1.08524558107	0.11520742261	-1.50457319498	-0.835516162036	-0.471830774119	0.608868122912	0.65175049116	0.715919130383	-0.0142932842812	-0.0665162039339	0.860078340445	0.216193987589	1.11134311876	-4.31328570169	8.77856312785	29.8798895222
38	1.58002593987	-2.4952166433	0.644933167816	4.03643114401	-0.9618003042	4.66170411509	0.767078035308	1.10950388326	1.17735620226	-0.144734346263	-0.96238221491	-0.940207875397	-1.54326284963	1.41034015089	0.0361192645908	1.46273577996	-0.165272887432	0.526366377402	1.27899387046	0.415287180326	1.91288448484	-2.25651727086	16.8925115917	21.4654320085
39	8.45294663937	-4.22080609708	3.16424474334	4.6535750477	-1.17139708651	8.5409913718	-0.194272977865	-0.758587899053	0.116398398101	0.682635726194	0.194869840235	-0.708078628305	-0.830308287471	0.538655032702	-0.039003005897	0.500157755433	-0.060160480121	-0.0839128692463	0.610794332368	-0.132177534858	0.522136909791	-40.3321161446	-46.6536984455	72.2156138471
40	4.71193957405	-2.1738704359	3.76416752002	3.79232733411	-2.99068697706	3.45988527988	0.0354411874789	-0.000900143924509	-0.23083539484	0.226302124035	0.180549950525	0.23209308274	-0.192912553932	0.211494705037	-0.110451065805	0.623806821928	-0.173124784001	-0.0541540220085	0.837567294827	0.00420390464886	0.470301897801	-43.4180688075	-49.2255012767	67.0443721636
41	1.99567025178	-3.18624173445	0.90216166968	4.77005130039	-1.9506626527	4.24490667193	0.306114402909	0.395593564357	-1.54331970446	0.29781983335	0.059792192047	-0.248869495034	0.529386722087	0.0404002293422	-0.340948551119	1.00232079089	-0.133944248287	-0.641275062792	1.03465185985	0.0394718815856	1.83782975066	-22.0946147108	-76.9839526714	83.0695612601
42	5.18262386674	-1.2813537543	2.38511418827	3.6561614132	0.171767688665	3.9419332714	0.94070600825	0.281572998697	-1.52857480547	-0.230258926517	0.155189816155	0.118825933229	1.22319253742	-0.161481926366	-1.09600662941	0.951032787955	0.0483466222053	-0.268359946067	0.733598840706	-0.1362661318	0.867544787312	-50.3928291114	-66.0149867166	59.3526950756
43	7.84394553601	-0.832045572764	0.970231977422	1.96767950233	-1.1594389487	4.80897406357	1.61712015128	2.3927519838	-1.51732404042	-0.294801586309	0.0326117742824	-0.263514355045	1.40595127354	1.42400214706	-1.58438949267	0.941416385506	0.151229929104	-0.105588685481	0.872646822008	-0.381661870347	1.0222282633	-40.9327758992	-59.6640763521	54.1001197098
44	7.15226306714	-0.841450359164	7.04558140723	5.54699033224	-2.34197954366	7.28632494576	1.75394116499	0.887454921496	-3.23566417803	-1.22249255344	0.134138559443	0.414458549186	0.217501569382	0.542605712125	-1.7208085435	1.1444632129	0.301825644615	-0.354657589985	0.950692322642	-0.229517202959	1.48350161015	-46.6982991339	-67.1719108895	52.8568645817
45	6.73711940686	-2.54276121873	-1.62853443912	3.84171813721	1.90534570439	2.95338044527	0.0672276307517	1.98121289535	-0.608061481694	0.490248376939	-1.11731021121	-0.142787790657	0.281433208207	-1.89562113228	0.888013985306	0.823010216418	0.139071823104	-0.210380898323	0.81258360399	-0.188400743327	0.707342437986	-50.4727924929	-54.8379696978	63.870748609
46	1.89746598029	-4.28292542681	2.39940665088	5.98040086173	-2.05871625313	0.627716779396	1.13759310812	-0.888353396619	-2.8887972054	0.0285063330671	0.479443946009	1.02918720746	0.768597715947	0.0257731757943	-1.40874659451	1.147617524	-0.149640501556	-0.642576026413	1.14652083823	0.235306151812	2.15738354652	-35.938976852	-82.3583878771	72.0129544052
47	3.16667067072	-0.648171686143	1.08224103767	3.87793981721	0.375606079741	5.9272715117	0.355389258294	-0.0310523820957	-2.00789770743	0.915106556504	-0.294729273049	0.123007053701	0.9445963286	-0.528246308013	0.0636155759699	1.2742951778	-0.441713346894	-0.640316657145	1.25106246675	0.405622155394	2.33234579699	-33.3977925323	-83.2786214093	84.0558057709
48	1.53251013288	-0.0476619584516	0.268384958562	5.71326177495	-1.71825951038	7.4616455481	-0.650884732627	-0.827343381208	-2.82167771407	0.0126059232172	0.915263421559	0.751867844647	0.72818446258	-2.33806422166	-0.282754126317	1.00862279564	-0.274582564756	-0.401907598223	1.99201448885	0.412148466343	2.7390051524	-40.418120909	-83.4474710319	86.7909782267
49	2.0401988337	2.18913487972	-0.390028278927	8.34091975734	-0.928059991906	5.95904016034	0.8991792771	1.13324160379	-0.352074342913	-0.106739414593	1.32287120787	-0.113865034053	1.99574353353	-0.357056982943	-2.0080728112	0.898507166545	0.0645538271451	-0.564061240052	1.21946112865	-0.228254241878	1.74607708545	-32.7511283305	-80.5670881668	72.0664954307
50	3.17195068073	-2.41906154318	-1.11630689808	2.18846692816	1.29130148313	6.00785137612	0.286303241517	-0.386271459655	-0.893314453201	2.16578185934	-0.904415971279	0.0472693816523	0.183642522845	-1.52596356294	0.408518251195	2.02588950475	-0.681897214534	-0.554949414683	1.17725705605	0.616357767771	2.05191343488	-37.094128293	-90.5381364129	88.6155756748
51	7.36365816128	4.69418704293	0.750037630713	6.2098298144	-0.350450874828	2.71618245754	0.0862474613162	0.514044161807	0.152304606656	-0.113393401089	0.16274803925	0.0627518499816	0.227893312563	0.414695888266	-0.238106228866	0.675018514482	0.048631023272	-0.0760370611999	0.614171221865	-0.0435011907133	0.404615349649	-37.1407250833	-15.1881667136	52.9436058587
52	7.65049669279	8.4967846425	0.3957281741	9.49361438202	0.778901213969	0.363836081648	-0.102727157841	-1.07180144388	0.762866944423	-0.0184576980463	-0.500431524012	0.747028566897	0.435597772235	0.372031717738	0.662039115816	0.854688868656	0.289418572847	0.0081521156752	0.846335314116	0.0596759417666	0.764217186166	-40.8459016749	-17.7627018265	57.636257679
53	0.238874861755	1.14333119833	-2.20258056133	4.16221207666	1.16210602756	6.67760373672	-0.128402692868	-1.05668310857	0.0652248131826	0.081988376718	0.107299341489	-0.368738033725	0.124738307988	1.48232190015	0.0543545399497	0.706789198356	0.305794118004	-0.0192994940662	1.26054973116	-0.262152446425	1.07028668645	-17.0037978028	6.69000049838	74.5580493525
54	8.32148999098	0.711023823371	-0.259019627979	5.94799848765	3.4949560297	6.9554837607	0.42986290152	-1.79234137195	0.0303035783637	1.70972822078	-0.769655991242	0.59993516875	0.781315317415	-1.00548133233	0.217783078439	1.42629237079	-0.248221932377	0.11054094202	1.26107742095	-0.114034523781	0.68051823739	-45.0289007625	-18.2111507094	76.6877554127
55	4.84672119552	1.34998631423	1.8915954089	3.75461610122	3.01718152604	2.91302267812	0.460391723336	-1.04293591351	1.04528024027	1.24928029666	-0.483375626131	0.628823002337	0.789836122253	-0.0504686534402	-0.110952567642	0.978344219193	-0.0881325140381	0.111448953848	0.967979048272	-0.0516670080904	0.595872855363	-39.5147029428	-6.89823444038	74.7629882622
56	3.84161794668	1.87410697101	-2.71807471009	3.66543994054	-1.59196677395	8.86713134381	0.549631394245	-0.669972708673	1.33831784661	0.444633204348	0.212491755342	0.482429792775	-1.0100628531	0.197493195146	-0.728518466234	0.716383730747	0.0645503622067	0.0842391001916	0.780954021623	-0.418501271534	1.31585234356	-30.7605174829	13.2380187782	81.0565464248

精密化 TLSグループ

Refine-ID: X-RAY DIFFRACTION

ID	Refine TLS-ID	Selection details	Auth asym-ID	Label asym-ID	Auth seq-ID	Label seq-ID
1	1	chain 'C' and (resid 1 through 34 )	C	A	1 - 34	1 - 33
2	2	chain 'C' and (resid 35 through 67 )	C	A	35 - 67	34 - 60
3	3	chain 'C' and (resid 68 through 143 )	C	A	68 - 143	61 - 135
4	4	chain 'C' and (resid 144 through 238 )	C	A	144 - 238	136 - 226
5	5	chain 'G' and (resid 2 through 116 )	G	B	2 - 116	1 - 95
6	6	chain 'G' and (resid 117 through 231 )	G	B	117 - 231	96 - 210
7	7	chain 'A' and (resid 1 through 18 )	A	C	1 - 18	1 - 17
8	8	chain 'A' and (resid 19 through 67 )	A	C	19 - 67	18 - 60
9	9	chain 'A' and (resid 68 through 99 )	A	C	68 - 99	61 - 91
10	10	chain 'A' and (resid 100 through 124 )	A	C	100 - 124	92 - 116
11	11	chain 'A' and (resid 125 through 143 )	A	C	125 - 143	117 - 135
12	12	chain 'A' and (resid 144 through 169 )	A	C	144 - 169	136 - 156
13	13	chain 'A' and (resid 170 through 181 )	A	C	170 - 181	157 - 168
14	14	chain 'A' and (resid 182 through 199 )	A	C	182 - 199	169 - 186
15	15	chain 'A' and (resid 200 through 212 )	A	C	200 - 212	187 - 199
16	16	chain 'A' and (resid 213 through 239 )	A	C	213 - 239	200 - 226
17	17	chain 'B' and (resid 4 through 100 )	B	D	4 - 100	1 - 72
18	18	chain 'B' and (resid 101 through 152 )	B	D	101 - 152	73 - 124
19	19	chain 'B' and (resid 153 through 230 )	B	D	153 - 230	125 - 202
20	20	chain 'D' and (resid 1 through 18 )	D	E	1 - 18	1 - 17
21	21	chain 'D' and (resid 19 through 45 )	D	E	19 - 45	18 - 40
22	22	chain 'D' and (resid 46 through 67 )	D	E	46 - 67	41 - 60
23	23	chain 'D' and (resid 68 through 106 )	D	E	68 - 106	61 - 98
24	24	chain 'D' and (resid 107 through 130 )	D	E	107 - 130	99 - 122
25	25	chain 'D' and (resid 131 through 181 )	D	E	131 - 181	123 - 168
26	26	chain 'D' and (resid 182 through 191 )	D	E	182 - 191	169 - 178
27	27	chain 'D' and (resid 192 through 237 )	D	E	192 - 237	179 - 224
28	28	chain 'E' and (resid 2 through 100 )	E	F	2 - 100	1 - 80
29	29	chain 'E' and (resid 101 through 229 )	E	F	101 - 229	81 - 209
30	30	chain 'F' and (resid 1 through 45 )	F	G	1 - 45	1 - 40
31	31	chain 'F' and (resid 46 through 99 )	F	G	46 - 99	41 - 91
32	32	chain 'F' and (resid 100 through 143 )	F	G	100 - 143	92 - 135
33	33	chain 'F' and (resid 144 through 239 )	F	G	144 - 239	136 - 225
34	34	chain 'H' and (resid 2 through 44 )	H	H	2 - 44	1 - 37
35	35	chain 'H' and (resid 45 through 120 )	H	H	45 - 120	38 - 98
36	36	chain 'H' and (resid 121 through 168 )	H	H	121 - 168	99 - 146
37	37	chain 'H' and (resid 169 through 204 )	H	H	169 - 204	147 - 182
38	38	chain 'H' and (resid 205 through 229 )	H	H	205 - 229	183 - 207
39	39	chain 'I' and (resid 1 through 107 )	I	I	1 - 107	1 - 99
40	40	chain 'I' and (resid 108 through 143 )	I	I	108 - 143	100 - 135
41	41	chain 'I' and (resid 144 through 239 )	I	I	144 - 239	136 - 224
42	42	chain 'J' and (resid 3 through 44 )	J	J	3 - 44	1 - 36
43	43	chain 'J' and (resid 45 through 75 )	J	J	45 - 75	37 - 57
44	44	chain 'J' and (resid 76 through 100 )	J	J	76 - 100	58 - 80
45	45	chain 'J' and (resid 101 through 116 )	J	J	101 - 116	81 - 96
46	46	chain 'J' and (resid 117 through 139 )	J	J	117 - 139	97 - 119
47	47	chain 'J' and (resid 140 through 165 )	J	J	140 - 165	120 - 145
48	48	chain 'J' and (resid 166 through 183 )	J	J	166 - 183	146 - 163
49	49	chain 'J' and (resid 184 through 197 )	J	J	184 - 197	164 - 177
50	50	chain 'J' and (resid 198 through 229 )	J	J	198 - 229	178 - 209
51	51	chain 'K' and (resid 1 through 107 )	K	K	1 - 107	1 - 99
52	52	chain 'K' and (resid 108 through 143 )	K	K	108 - 143	100 - 135
53	53	chain 'K' and (resid 144 through 239 )	K	K	144 - 239	136 - 224
54	54	chain 'L' and (resid 3 through 100 )	L	L	3 - 100	1 - 71
55	55	chain 'L' and (resid 101 through 139 )	L	L	101 - 139	72 - 110
56	56	chain 'L' and (resid 140 through 229 )	L	L	140 - 229	111 - 200

+
万見について

-
お知らせ

-
2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

EMDBのヘッダファイルのバージョン3が、公式のフォーマットとなりました。
これまでは公式だったバージョン1.9は、アーカイブから削除されます。

関連情報:EMDBヘッダ

外部リンク:wwPDBはEMDBデータモデルのバージョン3へ移行します

-
2020年8月12日: 新型コロナ情報

新型コロナ情報

URL: https://pdbj.org/emnavi/covid19.php

新ページ: EM Navigatorに新型コロナウイルスの特設ページを開設しました。

関連情報:Covid-19情報 / 2020年3月5日: 新型コロナウイルスの構造データ

+
2020年3月5日: 新型コロナウイルスの構造データ

+
2019年1月31日: EMDBのIDの桁数の変更

+
2017年7月12日: PDB大規模アップデート

すべてのお知らせ

-
万見 (Yorodumi)

幾万の構造データを、幾万の視点から

万見(Yorodumi)は、EMDB/PDB/SASBDBなどの構造データを閲覧するためのページです。
EM Navigatorの詳細ページの後継、Omokage検索のフロントエンドも兼ねています。

関連情報:EMDB / PDB / SASBDB / 3つのデータバンクの比較 / 万見検索 / 2016年8月31日: 新しいEM Navigatorと万見 / 万見文献 / Jmol/JSmol / 機能・相同性情報 / 新しいEM Navigatorと万見の変更点

他の情報も見る

-
ムービー

-
構造ビューア

+
ビューアのログ

-
このページ

-
このウェブサイト

-
オプション

+
データを開く

-
基本情報

-
構造の表示

-
ダウンロードとリンク

-
ダウンロード

-
検証レポート

-
関連構造データ

-
リンク

-
集合体

-
要素

-
実験情報

-
実験

-
試料調製

-
データ収集

-
解析

+
万見について

-
お知らせ

-
2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

-
2020年8月12日: 新型コロナ情報

+
2020年3月5日: 新型コロナウイルスの構造データ

+
2019年1月31日: EMDBのIDの桁数の変更

+
2017年7月12日: PDB大規模アップデート

-
万見 (Yorodumi)

-ムービー

-構造ビューア

+ビューアのログ

-このページ

-このウェブサイト

-オプション

+データを開く

-基本情報

-構造の表示

-ダウンロードとリンク

-ダウンロード

-検証レポート

-関連構造データ

-リンク

-集合体

-要素

-実験情報

-実験

-試料調製

-データ収集

-解析

+万見について

-お知らせ

-2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

-2020年8月12日: 新型コロナ情報

+2020年3月5日: 新型コロナウイルスの構造データ

+2019年1月31日: EMDBのIDの桁数の変更

+2017年7月12日: PDB大規模アップデート

-万見 (Yorodumi)

-
ムービー

-
構造ビューア

+
ビューアのログ

-
このページ

-
このウェブサイト

-
オプション

+
データを開く

-
基本情報

-
構造の表示

-
ダウンロードとリンク

-
ダウンロード

-
検証レポート

-
関連構造データ

-
リンク

-
集合体

-
要素

-
実験情報

-
実験

-
試料調製

-
データ収集

-
解析

+
万見について

-
お知らせ

-
2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

-
2020年8月12日: 新型コロナ情報

+
2020年3月5日: 新型コロナウイルスの構造データ

+
2019年1月31日: EMDBのIDの桁数の変更

+
2017年7月12日: PDB大規模アップデート

-
万見 (Yorodumi)