登録情報 データベース : PDB / ID : 8ka1 構造の表示 ダウンロードとリンクタイトル Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-free calmodulin 要素Calmodulin-2 RDTND-RID CBD 詳細キーワード TOXIN / MARTX toxin / RDTND-RID / NADase / CaM機能・相同性 機能・相同性情報分子機能 ドメイン・相同性 構成要素
合成酵素; C-N結合を形成; 酸-D-アミノ酸リガーゼ(ペプチド合成) / negative regulation of calcium ion transmembrane transporter activity / host cell cytosol / positive regulation of cyclic-nucleotide phosphodiesterase activity / negative regulation of calcium ion export across plasma membrane / acyltransferase activity / positive regulation of ryanodine-sensitive calcium-release channel activity / regulation of cell communication by electrical coupling involved in cardiac conduction / negative regulation of peptidyl-threonine phosphorylation / ligase activity ... 合成酵素; C-N結合を形成; 酸-D-アミノ酸リガーゼ(ペプチド合成) / negative regulation of calcium ion transmembrane transporter activity / host cell cytosol / positive regulation of cyclic-nucleotide phosphodiesterase activity / negative regulation of calcium ion export across plasma membrane / acyltransferase activity / positive regulation of ryanodine-sensitive calcium-release channel activity / regulation of cell communication by electrical coupling involved in cardiac conduction / negative regulation of peptidyl-threonine phosphorylation / ligase activity / protein phosphatase activator activity / positive regulation of phosphoprotein phosphatase activity / adenylate cyclase binding / catalytic complex / detection of calcium ion / regulation of cardiac muscle contraction / negative regulation of ryanodine-sensitive calcium-release channel activity / calcium channel inhibitor activity / regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion / regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum / cysteine-type peptidase activity / positive regulation of protein dephosphorylation / regulation of calcium-mediated signaling / titin binding / positive regulation of protein autophosphorylation / voltage-gated potassium channel complex / sperm midpiece / 転移酵素; アシル基を移すもの; アミノアシル基以外のアシル基を移すもの / calcium channel complex / substantia nigra development / adenylate cyclase activator activity / regulation of heart rate / sarcomere / protein serine/threonine kinase activator activity / regulation of cytokinesis / positive regulation of peptidyl-threonine phosphorylation / spindle microtubule / positive regulation of protein serine/threonine kinase activity / spindle pole / response to calcium ion / calcium-dependent protein binding / G2/M transition of mitotic cell cycle / myelin sheath / toxin activity / vesicle / transmembrane transporter binding / 加水分解酵素; プロテアーゼ; ペプチド結合加水分解酵素; システインプロテアーゼ / G protein-coupled receptor signaling pathway / centrosome / lipid binding / calcium ion binding / protein kinase binding / host cell plasma membrane / protein-containing complex / proteolysis / extracellular region / membrane / nucleus / metal ion binding / plasma membrane / cytoplasm 類似検索 - 分子機能 : / : / Pasteurella multocida toxin, C2 domain / C-terminal repeat from RTX toxins / : / RtxA toxin / RtxA repeat / Dermonecrotic/RTX toxin, membrane localization domain / Membrane Localization Domain / CGT/MARTX, cysteine protease (CPD) domain ... : / : / Pasteurella multocida toxin, C2 domain / C-terminal repeat from RTX toxins / : / RtxA toxin / RtxA repeat / Dermonecrotic/RTX toxin, membrane localization domain / Membrane Localization Domain / CGT/MARTX, cysteine protease (CPD) domain / CGT/MARTX, cysteine protease (CPD) domain superfamily / Peptidase C80 family / CGT/MARTX cysteine protease (CPD) domain profile. / Serralysin-like metalloprotease, C-terminal / alpha/beta hydrolase fold / Alpha/beta hydrolase fold-1 / EF-hand domain pair / EF-hand, calcium binding motif / EF-Hand 1, calcium-binding site / EF-hand calcium-binding domain. / EF-hand calcium-binding domain profile. / EF-hand domain / EF-hand domain pair / Alpha/Beta hydrolase fold 類似検索 - ドメイン・相同性 Multifunctional-autoprocessing repeats-in-toxin / Calmodulin-2 類似検索 - 構成要素生物種 Vibrio vulnificus (バクテリア)Homo sapiens (ヒト)手法 X線回折 / シンクロトロン / 分子置換 / 解像度 : 2.82 Å 詳細データ登録者 Lee, Y. / Choi, S. / Hwang, J. / Kim, M.H. 資金援助 韓国, 2件 詳細 詳細を隠す組織 認可番号 国 Other government the Korea Research Institute of Bioscience and Biotechnology (KRIBB) Research Initiative Program (KGM1382312) 韓国 Other government the Korea Research Institute of Bioscience and Biotechnology (KRIBB) Research Initiative Program (KGM2112335) 韓国
引用ジャーナル : To Be Published タイトル : Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-free calmodulin著者 : Lee, Y. / Choi, S. / Hwang, J. / Kim, M.H. 履歴 登録 2023年8月2日 登録サイト : PDBJ / 処理サイト : PDBJ改定 1.0 2024年7月10日 Provider : repository / タイプ : Initial release