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Yorodumi- PDB-8glc: A1 AncAla: Adenylation domain 1 core construct from ancestral rec... -
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Open data
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Basic information
| Entry | Database: PDB / ID: 8glc | |||||||||
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| Title | A1 AncAla: Adenylation domain 1 core construct from ancestral reconstruction of glycopeptide antibiotic biosynthesis, alanine selection pocket | |||||||||
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Keywords | LIGASE / AMP-binding enzyme / NRPS / Adenylation domain | |||||||||
| Function / homology | MbtH-like protein / MbtH-like domain / MbtH-like domain superfamily / MbtH-like protein / MbtH-like protein / siderophore biosynthetic process / cytosol / MbtH-like short polypeptide Function and homology information | |||||||||
| Biological species | Actinoplanes (bacteria) Actinoplanes teichomyceticus (bacteria) | |||||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.12 Å | |||||||||
Authors | Hansen, M.H. / Cryle, M.J. | |||||||||
| Funding support | Australia, 2items
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Citation | Journal: Nat Commun / Year: 2023Title: Resurrecting ancestral antibiotics: unveiling the origins of modern lipid II targeting glycopeptides. Authors: Hansen, M.H. / Adamek, M. / Iftime, D. / Petras, D. / Schuseil, F. / Grond, S. / Stegmann, E. / Cryle, M.J. / Ziemert, N. | |||||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 8glc.cif.gz | 582 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb8glc.ent.gz | 406.5 KB | Display | PDB format |
| PDBx/mmJSON format | 8glc.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 8glc_validation.pdf.gz | 443.5 KB | Display | wwPDB validaton report |
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| Full document | 8glc_full_validation.pdf.gz | 452.1 KB | Display | |
| Data in XML | 8glc_validation.xml.gz | 29.8 KB | Display | |
| Data in CIF | 8glc_validation.cif.gz | 40.3 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/gl/8glc ftp://data.pdbj.org/pub/pdb/validation_reports/gl/8glc | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 8gicSC ![]() 8gj4C ![]() 8gjpC ![]() 8gkmC S: Starting model for refinement C: citing same article ( |
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| Similar structure data | Similarity search - Function & homology F&H Search |
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Assembly
| Deposited unit | ![]()
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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Components
About Yorodumi



Actinoplanes (bacteria)
X-RAY DIFFRACTION
Australia, 2items
Citation



PDBj

