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Yorodumi- PDB-8dx4: Clostridioides difficile R20291 minor pilin - PilW fused with Mal... -
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Open data
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Basic information
| Entry | Database: PDB / ID: 8dx4 | |||||||||
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| Title | Clostridioides difficile R20291 minor pilin - PilW fused with Maltose Binding Protein | |||||||||
Components | Maltodextrin-binding protein,Putative pilin protein | |||||||||
Keywords | DNA BINDING PROTEIN / Membrane Bound Protein / Pilin | |||||||||
| Function / homology | Function and homology informationprotein secretion by the type II secretion system / type II protein secretion system complex / cell envelope / carbohydrate transmembrane transporter activity / maltose binding / maltose transport / maltodextrin transmembrane transport / ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing / periplasmic space / metal ion binding / plasma membrane Similarity search - Function | |||||||||
| Biological species | ![]() Clostridioides difficile R20291 (bacteria) | |||||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.487 Å | |||||||||
Authors | Ronish, L.A. / Piepenbrink, K. | |||||||||
| Funding support | United States, 2items
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Citation | Journal: J.Biol.Chem. / Year: 2022Title: Recognition of extracellular DNA by type IV pili promotes biofilm formation by Clostridioides difficile. Authors: Ronish, L.A. / Sidner, B. / Yu, Y. / Piepenbrink, K.H. | |||||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 8dx4.cif.gz | 786.9 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb8dx4.ent.gz | 657.2 KB | Display | PDB format |
| PDBx/mmJSON format | 8dx4.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 8dx4_validation.pdf.gz | 509.7 KB | Display | wwPDB validaton report |
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| Full document | 8dx4_full_validation.pdf.gz | 529.4 KB | Display | |
| Data in XML | 8dx4_validation.xml.gz | 73.9 KB | Display | |
| Data in CIF | 8dx4_validation.cif.gz | 103.6 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/dx/8dx4 ftp://data.pdbj.org/pub/pdb/validation_reports/dx/8dx4 | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 7t31C ![]() 4tsmS C: citing same article ( S: Starting model for refinement |
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| Similar structure data | Similarity search - Function & homology F&H Search |
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Assembly
| Deposited unit | ![]()
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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About Yorodumi




X-RAY DIFFRACTION
United States, 2items
Citation

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