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- PDB-8bqs: Cryo-EM structure of the I-II-III2-IV2 respiratory supercomplex f... -

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Basic information

Entry
Database: PDB / ID: 8bqs
TitleCryo-EM structure of the I-II-III2-IV2 respiratory supercomplex from Tetrahymena thermophila
Components
  • (Acyl carrier ...) x 2
  • (Cytochrome c oxidase subunit ...) x 3
  • (Gamma-carbonic ...) x 2
  • (NADH dehydrogenase [ubiquinone] ...) x 8
  • (NADH dehydrogenase subunit ...) x 6
  • (NADH-ubiquinone oxidoreductase ...) x 7
  • (SURF1-like protein) x 2
  • (Transmembrane ...) x 34
  • (Transposase) x 2
  • (Zf-Tim10_DDP domain-containing ...) x 2
  • 2 iron, 2 sulfur cluster-binding protein
  • 2-oxoglutarate/malate carrier protein
  • 37S ribosomal protein S25, mitochondrial
  • 39S ribosomal protein L9, mitochondrial
  • ABC transporter
  • ATP synthase subunit e, mitochondrial
  • Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
  • Annexin
  • Apocytochrome b
  • CHCH domain-containing protein
  • COX assembly mitochondrial protein
  • COXTT10
  • COXTT12,Transmembrane protein,Transmembrane protein,Transmembrane protein
  • COXTT22
  • COXTT27
  • COXTT28
  • COXTT9
  • CTF/NF-I domain-containing protein
  • CX9C domain-containing protein
  • Carrier protein
  • Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,chain 150
  • Complex I-MNLL
  • Complex III subunit VII
  • Cullin domain-containing protein
  • Cytochrome protein c1
  • DUF4885 domain-containing protein
  • Decapping nuclease
  • Diphthamide synthesis protein
  • DnaJ domain protein
  • ETC complex I subunit motif protein
  • GRAM domain protein
  • Iron-binding zinc finger CDGSH type protein
  • Lipid-A-disaccharide synthase
  • Lysozyme
  • M16 family peptidase, putative
  • Mobilization protein
  • NAD-dependent epimerase/dehydratase family protein
  • NADH dehydrogenase, putative
  • ND5a
  • NDUA13
  • NDUB10
  • NDUB4
  • NDUB6
  • NDUB8
  • NDUPH2
  • NDUTT10
  • NDUTT11
  • NDUTT12
  • NmrA domain-containing protein
  • Oxoglutarate/malate translocator protein, putative
  • PH domain-containing protein
  • Peptidase M16 inactive domain protein
  • Phage protein
  • Protein phosphatase 2C, putative
  • RNase III domain-containing protein
  • Ribosomal protein L51/S25/CI-B8 domain protein
  • Rieske iron-sulfur protein, ubiquinol-cytochrome C reductase iron-sulfur subunit
  • SDHTT11
  • Structural protein
  • Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
  • Thioredoxin
  • Tim10/DDP family zinc finger protein
  • TraB family protein
  • Transcription factor apfi protein, putative
  • UQCRTT1
  • UQCRTT2
  • UQCRTT3
  • Ubiquinol-cytochrome C reductase hinge protein
  • YflT domain-containing protein
  • Ymf57
  • Ymf58
  • Ymf62
  • Ymf65
  • Ymf67
  • Ymf68
  • Ymf70
  • Ymf75
  • Zinc-finger protein
  • chain 77
  • succinate dehydrogenase
  • succinate dehydrogenase complex iron-sulfur subunit D
KeywordsELECTRON TRANSPORT / Ciliate / Mitochondrial / Supercomplex
Function / homology
Function and homology information


lipid-A-disaccharide synthase / lipid-A-disaccharide synthase activity / NADH:ubiquinone reductase (H+-translocating) / : / quinol-cytochrome-c reductase / : / mitochondrial electron transport, succinate to ubiquinone / P450-containing electron transport chain / succinate dehydrogenase (quinone) activity / succinate dehydrogenase ...lipid-A-disaccharide synthase / lipid-A-disaccharide synthase activity / NADH:ubiquinone reductase (H+-translocating) / : / quinol-cytochrome-c reductase / : / mitochondrial electron transport, succinate to ubiquinone / P450-containing electron transport chain / succinate dehydrogenase (quinone) activity / succinate dehydrogenase / NADH dehydrogenase complex / respiratory chain complex IV / mitochondrial envelope / cytochrome-c oxidase / oxidoreductase activity, acting on NAD(P)H / mitochondrial electron transport, cytochrome c to oxygen / 3 iron, 4 sulfur cluster binding / cytochrome-c oxidase activity / mitochondrial electron transport, ubiquinol to cytochrome c / lipid A biosynthetic process / ligase activity / acyl binding / acyl carrier activity / electron transport coupled proton transport / NADH:ubiquinone reductase (H+-translocating) / mitochondrial respiratory chain complex I assembly / mitochondrial electron transport, NADH to ubiquinone / NADH dehydrogenase activity / respiratory chain complex I / NADH dehydrogenase (ubiquinone) activity / quinone binding / ATP synthesis coupled electron transport / : / tricarboxylic acid cycle / protein folding chaperone / aerobic respiration / respiratory electron transport chain / electron transport chain / mitochondrial membrane / phospholipid binding / 2 iron, 2 sulfur cluster binding / NAD binding / metallopeptidase activity / unfolded protein binding / protein transport / FMN binding / flavin adenine dinucleotide binding / protein-folding chaperone binding / 4 iron, 4 sulfur cluster binding / response to oxidative stress / electron transfer activity / mitochondrial inner membrane / oxidoreductase activity / ribosome / copper ion binding / DNA-binding transcription factor activity / heme binding / protein-containing complex binding / mitochondrion / zinc ion binding / metal ion binding / nucleus / membrane / plasma membrane / cytoplasm
Similarity search - Function
Surfeit locus 1/Shy1 / Surfeit locus 1/4 / TraB/PryY-like / SURF1 family / SURF1 family profile. / CTF transcription factor/nuclear factor 1, DNA-binding domain / CTF/NF-I DNA-binding domain profile. / Glycosyl transferase, family 19 / Lipid-A-disaccharide synthetase / : ...Surfeit locus 1/Shy1 / Surfeit locus 1/4 / TraB/PryY-like / SURF1 family / SURF1 family profile. / CTF transcription factor/nuclear factor 1, DNA-binding domain / CTF/NF-I DNA-binding domain profile. / Glycosyl transferase, family 19 / Lipid-A-disaccharide synthetase / : / : / Tim10-like / Tim10-like domain superfamily / Tim10/DDP family zinc finger / : / : / Mitochondrial substrate/solute carrier / Iron-binding zinc finger, CDGSH type / Mitochondrial carrier domain superfamily / MitoNEET, CDGSH iron-sulfur domain / Mitochondrial carrier protein / Solute carrier (Solcar) repeat profile. / CDGSH-type zinc finger. Function unknown. / : / Dynactin subunit 5 / : / : / Succinate dehydrogenase, flavoprotein subunit / NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminal / NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit / Regulator of chromosome condensation (RCC1) repeat / Regulator of chromosome condensation, RCC1 / Regulator of chromosome condensation (RCC1) repeat profile. / : / Adrenodoxin / Succinate dehydrogenase/fumarate reductase, flavoprotein subunit / : / Fumarate reductase/succinate dehydrogenase, FAD-binding site / Fumarate reductase / succinate dehydrogenase FAD-binding site. / FAD-dependent oxidoreductase SdhA/FrdA/AprA / 4Fe-4S dicluster domain / Succinate dehydrogenase/fumarate reductase iron-sulphur protein / Succinate dehydogenase/fumarate reductase N-terminal / 2Fe-2S iron-sulfur cluster binding domain / Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II / Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal / Fumarate reductase flavoprotein C-term / Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily / Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily / FAD-dependent oxidoreductase 2, FAD binding domain / Cytochrome c oxidase subunit Vb, zinc binding region signature. / FAD binding domain / Alpha-helical ferredoxin / Cytochrome c oxidase, subunit Vb / Cytochrome c oxidase subunit Vb / Cytochrome c oxidase subunit Vb, zinc binding domain profile. / Cytochrome c oxidase, subunit Vb superfamily / DnaJ domain / Ubiquinol-cytochrome C reductase hinge domain / Ubiquinol-cytochrome C reductase hinge domain superfamily / Cytochrome c/quinol oxidase subunit II / Ubiquinol-cytochrome C reductase hinge protein / : / 2Fe-2S ferredoxin, iron-sulphur binding site / 2Fe-2S ferredoxin-type iron-sulfur binding region signature. / DnaJ molecular chaperone homology domain / Hexapeptide repeat / dnaJ domain profile. / Cytochrome c1 / Cytochrome C1 family / Cytochrome c oxidase, subunit I, copper-binding site / Heme-copper oxidase catalytic subunit, copper B binding region signature. / Cytochrome c oxidase-like, subunit I domain / Chaperone J-domain superfamily / Cytochrome oxidase subunit I profile. / DnaJ domain / Cytochrome C oxidase subunit II, periplasmic domain / Cytochrome c oxidase subunit I / Cytochrome c oxidase-like, subunit I superfamily / Cytochrome C and Quinol oxidase polypeptide I / Cytochrome b/b6, C-terminal domain superfamily / Cytochrome b/b6/petB / Cytochrome c oxidase subunit II-like C-terminal / Cytochrome oxidase subunit II copper A binding domain profile. / 2Fe-2S iron-sulfur cluster binding domain / Rieske iron-sulphur protein, C-terminal / Bacterial transferase hexapeptide (six repeats) / Cytochrome b/b6, N-terminal / Cytochrome b/b6-like domain superfamily / Cytochrome b/b6 N-terminal region profile. / Di-haem cytochrome, transmembrane / Rieske iron-sulphur protein / : / NADH-ubiquinone oxidoreductase NDSU1/NuoG-like, 4Fe-4S domain / Zinc finger, CHCC-type / Zinc-finger domain / Peptidase M16, C-terminal / Peptidase M16 inactive domain / Peptidase M16, N-terminal / Insulinase (Peptidase family M16)
Similarity search - Domain/homology
1,2-Distearoyl-sn-glycerophosphoethanolamine / Chem-8Q1 / ADENOSINE-5'-DIPHOSPHATE / ADENOSINE-5'-TRIPHOSPHATE / CARDIOLIPIN / COPPER (II) ION / DINUCLEAR COPPER ION / FE3-S4 CLUSTER / FLAVIN-ADENINE DINUCLEOTIDE / FE2/S2 (INORGANIC) CLUSTER ...1,2-Distearoyl-sn-glycerophosphoethanolamine / Chem-8Q1 / ADENOSINE-5'-DIPHOSPHATE / ADENOSINE-5'-TRIPHOSPHATE / CARDIOLIPIN / COPPER (II) ION / DINUCLEAR COPPER ION / FE3-S4 CLUSTER / FLAVIN-ADENINE DINUCLEOTIDE / FE2/S2 (INORGANIC) CLUSTER / FLAVIN MONONUCLEOTIDE / HEME-A / HEME C / PROTOPORPHYRIN IX CONTAINING FE / : / Chem-LPP / Chem-NDP / 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE / IRON/SULFUR CLUSTER / URIDINE-5'-DIPHOSPHATE / Ubiquinone-8 / Transmembrane protein, putative / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 / Oxoglutarate/malate translocator protein, putative / NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit / Transmembrane protein, putative / Transmembrane protein / SURF1-like protein / Uncharacterized protein / Uncharacterized protein / Diphthamide synthesis protein / Transmembrane protein / Transmembrane protein, putative / Uncharacterized protein / SURF1-like protein / Transmembrane protein / NADH dehydrogenase, putative / Transmembrane protein / succinate dehydrogenase / Transmembrane protein, putative / Gamma-carbonic anhydrase / Transmembrane protein / Iron-binding zinc finger CDGSH type protein / Transcription factor apfi protein, putative / Uncharacterized protein / Transmembrane protein, putative / Uncharacterized protein / Ribosomal protein L51/S25/CI-B8 domain protein / Transmembrane protein / Acyl carrier protein / Transmembrane protein / NADH-ubiquinone oxidoreductase 1, chain, putative / NADH-ubiquinone oxidoreductase 24 kDa subunit / Uncharacterized protein / Transmembrane protein, putative / Transmembrane protein / Transmembrane protein / Transmembrane protein, putative / Peptidase M16 inactive domain protein / Transmembrane protein, putative / Rieske iron-sulfur protein, ubiquinol-cytochrome C reductase iron-sulfur subunit / Transmembrane protein / Uncharacterized protein / Transmembrane protein, putative / Uncharacterized protein / M16 family peptidase, putative / Zinc-finger protein / NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial / Transmembrane protein / NAD-dependent epimerase/dehydratase family protein / Transmembrane protein, putative / Transmembrane protein / NADH dehydrogenase subunit 1 / Uncharacterized protein / Thioredoxin / CTF/NF-I domain-containing protein / Transmembrane protein, putative / Transmembrane protein, putative / DnaJ domain protein / lipid-A-disaccharide synthase / Transmembrane protein / Protein phosphatase 2C, putative / Transmembrane protein, putative / Transmembrane protein, putative / Uncharacterized protein / Transmembrane protein, putative / Chromosome condensation regulator RCC1 repeat protein / Transmembrane protein / Transmembrane protein, putative / 2 iron, 2 sulfur cluster-binding protein / Transmembrane protein, putative / Transmembrane protein / Acyl carrier protein / Gamma-carbonic anhydrase / Uncharacterized protein / Transmembrane protein, putative / Carrier protein / Uncharacterized protein / Tim10/DDP family zinc finger protein / Transmembrane protein
Similarity search - Component
Biological speciesTetrahymena thermophila SB210 (eukaryote)
MethodELECTRON MICROSCOPY / single particle reconstruction / cryo EM / Resolution: 2.9 Å
AuthorsMuhleip, A. / Kock Flygaard, R. / Baradaran, R. / Amunts, A.
Funding support Sweden, European Union, 4items
OrganizationGrant numberCountry
The Swedish Foundation for Strategic ResearchFFL15:0325 Sweden
Cancerfonden2017/1041 Sweden
European Research Council (ERC)ERC-2018-StG-805230European Union
Knut and Alice Wallenberg Foundation2018.0080 Sweden
CitationJournal: Nature / Year: 2023
Title: Structural basis of mitochondrial membrane bending by the I-II-III-IV supercomplex.
Authors: Alexander Mühleip / Rasmus Kock Flygaard / Rozbeh Baradaran / Outi Haapanen / Thomas Gruhl / Victor Tobiasson / Amandine Maréchal / Vivek Sharma / Alexey Amunts /
Abstract: Mitochondrial energy conversion requires an intricate architecture of the inner mitochondrial membrane. Here we show that a supercomplex containing all four respiratory chain components contributes ...Mitochondrial energy conversion requires an intricate architecture of the inner mitochondrial membrane. Here we show that a supercomplex containing all four respiratory chain components contributes to membrane curvature induction in ciliates. We report cryo-electron microscopy and cryo-tomography structures of the supercomplex that comprises 150 different proteins and 311 bound lipids, forming a stable 5.8-MDa assembly. Owing to subunit acquisition and extension, complex I associates with a complex IV dimer, generating a wedge-shaped gap that serves as a binding site for complex II. Together with a tilted complex III dimer association, it results in a curved membrane region. Using molecular dynamics simulations, we demonstrate that the divergent supercomplex actively contributes to the membrane curvature induction and tubulation of cristae. Our findings highlight how the evolution of protein subunits of respiratory complexes has led to the I-II-III-IV supercomplex that contributes to the shaping of the bioenergetic membrane, thereby enabling its functional specialization.
History
DepositionNov 21, 2022Deposition site: PDBE / Processing site: PDBE
Revision 1.0Aug 23, 2023Provider: repository / Type: Initial release
Revision 2.0Feb 19, 2025Group: Advisory / Atomic model ...Advisory / Atomic model / Data collection / Database references / Derived calculations / Non-polymer description / Polymer sequence / Source and taxonomy / Structure summary
Category: atom_site / chem_comp ...atom_site / chem_comp / chem_comp_atom / chem_comp_bond / citation / citation_author / em_admin / entity / entity_poly / entity_poly_seq / entity_src_nat / pdbx_entry_details / pdbx_modification_feature / pdbx_poly_seq_scheme / pdbx_struct_conn_angle / pdbx_struct_mod_residue / pdbx_struct_sheet_hbond / pdbx_unobs_or_zero_occ_residues / pdbx_validate_chiral / pdbx_validate_close_contact / pdbx_validate_torsion / struct_conf / struct_conn / struct_ref / struct_ref_seq / struct_ref_seq_dif / struct_sheet_range
Item: _atom_site.B_iso_or_equiv / _atom_site.Cartn_x ..._atom_site.B_iso_or_equiv / _atom_site.Cartn_x / _atom_site.Cartn_y / _atom_site.Cartn_z / _atom_site.auth_atom_id / _atom_site.auth_comp_id / _atom_site.auth_seq_id / _atom_site.group_PDB / _atom_site.label_atom_id / _atom_site.label_comp_id / _atom_site.label_seq_id / _atom_site.type_symbol / _chem_comp.formula / _chem_comp.formula_weight / _chem_comp.id / _chem_comp.mon_nstd_flag / _chem_comp.name / _chem_comp.pdbx_synonyms / _chem_comp.type / _citation.country / _citation.journal_abbrev / _citation.journal_id_ASTM / _citation.journal_id_CSD / _citation.journal_id_ISSN / _citation.journal_volume / _citation.page_first / _citation.page_last / _citation.pdbx_database_id_DOI / _citation.pdbx_database_id_PubMed / _citation.title / _citation.year / _citation_author.identifier_ORCID / _citation_author.name / _em_admin.last_update / _entity.formula_weight / _entity.pdbx_description / _entity_poly.pdbx_seq_one_letter_code / _entity_poly.pdbx_seq_one_letter_code_can / _entity_src_nat.pdbx_end_seq_num / _pdbx_entry_details.has_protein_modification / _pdbx_struct_sheet_hbond.range_1_label_seq_id / _pdbx_struct_sheet_hbond.range_2_label_seq_id / _pdbx_unobs_or_zero_occ_residues.label_seq_id / _struct_ref.db_code / _struct_ref.db_name / _struct_ref.pdbx_db_accession / _struct_ref.pdbx_seq_one_letter_code / _struct_ref_seq.pdbx_db_accession / _struct_ref_seq.seq_align_beg / _struct_ref_seq.seq_align_end / _struct_sheet_range.beg_label_seq_id / _struct_sheet_range.end_label_seq_id

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A0: Lipid-A-disaccharide synthase
A1: NAD-dependent epimerase/dehydratase family protein
A2: DnaJ domain protein
A3: Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
A4: RNase III domain-containing protein
A5: 37S ribosomal protein S25, mitochondrial
A6: Transmembrane protein, putative
A7: CX9C domain-containing protein
A8: ND5a
A9: Transmembrane protein, putative
AA: NADH dehydrogenase subunit 5
AB: NADH-ubiquinone oxidoreductase 75 kDa subunit
AC: NADH-ubiquinone oxidoreductase chain 4
AD: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
AE: NADH dehydrogenase subunit 7
AF: Ymf65
AG: Transcription factor apfi protein, putative
AH: NADH-ubiquinone oxidoreductase chain 1
AI: NADH-ubiquinone oxidoreductase 24 kDa subunit
AJ: Ymf62
AK: Gamma-carbonic anhydrase
AL: NADH-ubiquinone oxidoreductase 1, chain, putative
AM: Gamma-carbonic anhydrase
AN: ETC complex I subunit motif protein
AO: NADH dehydrogenase subunit 9
AP: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
AQ: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial
AR: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
AS: NADH dehydrogenase, putative
AT: NADH dehydrogenase subunit 10
AU: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit
AV: Acyl carrier protein
AW: Acyl carrier protein
AX: NADH-ubiquinone oxidoreductase chain 3
AY: Ymf58
AZ: Ribosomal protein L51/S25/CI-B8 domain protein
B0: Transmembrane protein, putative
B1: ATP synthase subunit e, mitochondrial
B2: GRAM domain protein
B3: Transmembrane protein, putative
B4: Transmembrane protein, putative
B5: Transmembrane protein, putative
B6: NADH dehydrogenase subunit 1
BA: Transmembrane protein
BB: Transmembrane protein, putative
BC: NDUB8
BD: Transmembrane protein, putative
BE: NDUPH2
BF: NDUB10
BG: NDUA13
BH: NADH dehydrogenase subunit 2
BI: 2 iron, 2 sulfur cluster-binding protein
BJ: Thioredoxin
BK: COX assembly mitochondrial protein
BL: Transmembrane protein, putative
BM: Transmembrane protein, putative
BN: PH domain-containing protein
BO: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
BP: NDUB6
BQ: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4
BR: Zinc-finger protein
BS: NDUB4
BT: NDUTT10
BU: NDUTT11
BV: NDUTT12
BW: CHCH domain-containing protein
BX: Transmembrane protein, putative
BY: Ymf57
BZ: Complex I-MNLL
CH: Diphthamide synthesis protein
CM: Transmembrane protein, putative
CL: Transposase
CA: Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
CI: DUF4885 domain-containing protein
CB: succinate dehydrogenase
CF: Transmembrane protein, putative
CG: chain 77
CK: Transmembrane protein, putative
CE: NmrA domain-containing protein
CJ: Transmembrane protein, putative
CN: Transmembrane protein, putative
CC: Transmembrane protein
CO: SDHTT11
CD: succinate dehydrogenase complex iron-sulfur subunit D
A: Peptidase M16 inactive domain protein
B: M16 family peptidase, putative
C: Apocytochrome b
D: Cytochrome protein c1
E: Rieske iron-sulfur protein, ubiquinol-cytochrome C reductase iron-sulfur subunit
F: Ubiquinol-cytochrome C reductase hinge protein
G: UQCRTT1
H: Transmembrane protein, putative
I: Transmembrane protein, putative
J: UQCRTT3
K: Transmembrane protein, putative
L: UQCRTT2
a: Peptidase M16 inactive domain protein
b: M16 family peptidase, putative
c: Apocytochrome b
d: Cytochrome protein c1
e: Rieske iron-sulfur protein, ubiquinol-cytochrome C reductase iron-sulfur subunit
f: Ubiquinol-cytochrome C reductase hinge protein
g: UQCRTT1
h: Transmembrane protein, putative
i: Transmembrane protein, putative
k: Transmembrane protein, putative
l: UQCRTT2
j: UQCRTT3
DA: Cytochrome c oxidase subunit 1
DB: Cytochrome c oxidase subunit 2
DC: Ymf68
DD: Cytochrome C oxidase subunit Vb protein
DE: Transmembrane protein, putative
DF: Structural protein
DG: Transmembrane protein, putative
DH: Transmembrane protein, putative
DI: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
DJ: Transmembrane protein, putative
DK: CTF/NF-I domain-containing protein
DM: Transmembrane protein, putative
DN: Ymf67
DO: Protein phosphatase 2C, putative
DP: SURF1-like protein
DQ: TraB family protein
DR: Transmembrane protein, putative
DS: Oxoglutarate/malate translocator protein, putative
DT: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8, mitochondrial
DU: Carrier protein
DV: 2-oxoglutarate/malate carrier protein
DW: SURF1-like protein
DX: COXTT9
DY: COXTT10
DZ: 39S ribosomal protein L9, mitochondrial
EA: COXTT12,Transmembrane protein,Transmembrane protein,Transmembrane protein
EB: Transmembrane protein, putative
EC: COXTT27
ED: Ymf75
EE: Mobilization protein
EF: Iron-binding zinc finger CDGSH type protein
EG: COXTT28
EH: Transmembrane protein, putative
EI: Transmembrane protein
EV: Decapping nuclease
EK: Complex III subunit VII
EL: Transmembrane protein, putative
EM: Transmembrane protein, putative
EN: COXTT22
EO: Transmembrane protein, putative
EP: Phage protein
EQ: Transmembrane protein, putative
ER: Lysozyme
ES: Ymf70
ET: Zf-Tim10_DDP domain-containing protein
EU: ABC transporter
EJ: YflT domain-containing protein
EW: Cullin domain-containing protein
EX: Zf-Tim10_DDP domain-containing protein
EY: Annexin
EZ: Transposase
FA: Tim10/DDP family zinc finger protein
Da: Cytochrome c oxidase subunit 1
Db: Cytochrome c oxidase subunit 2
Dc: Ymf68
Dd: Cytochrome C oxidase subunit Vb protein
De: Transmembrane protein, putative
Df: Structural protein
Dg: Transmembrane protein, putative
Dh: Transmembrane protein, putative
Di: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
Dj: Transmembrane protein, putative
Dk: CTF/NF-I domain-containing protein
Dm: Transmembrane protein, putative
Dn: Ymf67
Do: Protein phosphatase 2C, putative
Dp: SURF1-like protein
Dq: TraB family protein
Dr: Transmembrane protein, putative
Ds: Oxoglutarate/malate translocator protein, putative
Dt: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8, mitochondrial
Du: Carrier protein
Dv: 2-oxoglutarate/malate carrier protein
Dw: SURF1-like protein
Dx: COXTT9
Dy: COXTT10
Dz: 39S ribosomal protein L9, mitochondrial
Ea: COXTT12,Transmembrane protein,Transmembrane protein,Transmembrane protein
Eb: Transmembrane protein, putative
Ec: COXTT27
Ed: Ymf75
Ee: Mobilization protein
Ef: Iron-binding zinc finger CDGSH type protein
Eg: COXTT28
Eh: Transmembrane protein, putative
Ei: Transmembrane protein
Ev: Decapping nuclease
Ek: Complex III subunit VII
El: Transmembrane protein, putative
Em: Transmembrane protein, putative
En: COXTT22
Eo: Transmembrane protein, putative
Ep: Phage protein
Eq: Transmembrane protein, putative
Er: Lysozyme
Es: Ymf70
Et: Zf-Tim10_DDP domain-containing protein
Eu: ABC transporter
Ej: YflT domain-containing protein
Ew: Cullin domain-containing protein
Ex: Zf-Tim10_DDP domain-containing protein
Ey: Annexin
Ez: Transposase
Fa: Tim10/DDP family zinc finger protein
Dl: Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,chain 150
DL: Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,chain 150
hetero molecules


Theoretical massNumber of molelcules
Total (without water)6,250,466598
Polymers5,867,316214
Non-polymers383,150384
Water00
1


  • Idetical with deposited unit
  • defined by author&software
TypeNameSymmetry operationNumber
identity operation1_5551

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Components

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Protein , 82 types, 123 molecules A0A1A2A3A4A5A7A8AFAGAJANASAYAZB1B2BCBEBFBGBIBJBKBNBPBRBSBTBU...

#1: Protein Lipid-A-disaccharide synthase


Mass: 59307.289 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22E24, lipid-A-disaccharide synthase
#2: Protein NAD-dependent epimerase/dehydratase family protein


Mass: 41375.090 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MLH2
#3: Protein DnaJ domain protein


Mass: 36878.367 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22DR7
#4: Protein Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II


Mass: 36709.441 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24HK5
#5: Protein RNase III domain-containing protein


Mass: 35409.246 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LUQ4
#6: Protein 37S ribosomal protein S25, mitochondrial


Mass: 33201.797 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MIJ7
#8: Protein CX9C domain-containing protein


Mass: 28412.805 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MMF4
#9: Protein ND5a


Mass: 25493.336 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#16: Protein Ymf65


Mass: 43146.160 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q951A3
#17: Protein Transcription factor apfi protein, putative


Mass: 39793.414 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M8Q7
#20: Protein Ymf62


Mass: 30448.471 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Y2
#24: Protein ETC complex I subunit motif protein


Mass: 24277.859 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23ND5
#29: Protein NADH dehydrogenase, putative


Mass: 20167.854 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M2Y3
#35: Protein Ymf58


Mass: 13509.949 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Z5
#36: Protein Ribosomal protein L51/S25/CI-B8 domain protein


Mass: 12157.782 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MA77
#38: Protein ATP synthase subunit e, mitochondrial


Mass: 11283.534 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22E95
#39: Protein GRAM domain protein


Mass: 10920.431 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7X4R4
#46: Protein NDUB8


Mass: 24150.469 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M855
#48: Protein NDUPH2


Mass: 22446.637 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23KE0
#49: Protein NDUB10


Mass: 22167.137 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23KG0
#50: Protein NDUA13


Mass: 21045.617 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M2U4
#52: Protein 2 iron, 2 sulfur cluster-binding protein


Mass: 19564.221 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22W11
#53: Protein Thioredoxin


Mass: 19540.191 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22AI5
#54: Protein COX assembly mitochondrial protein


Mass: 17078.342 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M1N8
#57: Protein PH domain-containing protein


Mass: 15785.234 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22SC4
#59: Protein NDUB6


Mass: 15444.344 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q231G0
#61: Protein Zinc-finger protein


Mass: 15141.296 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MK02
#62: Protein NDUB4


Mass: 14410.395 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MG29
#63: Protein NDUTT10


Mass: 14963.529 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#64: Protein NDUTT11


Mass: 15334.371 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#65: Protein NDUTT12


Mass: 13983.049 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#66: Protein CHCH domain-containing protein


Mass: 13747.362 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MIM0
#68: Protein Ymf57


Mass: 12473.938 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q951C2
#69: Protein Complex I-MNLL


Mass: 12103.036 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22W63
#70: Protein Diphthamide synthesis protein


Mass: 22894.336 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LX66
#72: Protein Transposase


Mass: 11027.419 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7XBF5
#73: Protein Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial


Mass: 70082.758 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23DI3, succinate dehydrogenase
#74: Protein DUF4885 domain-containing protein


Mass: 12979.428 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22YL0
#75: Protein succinate dehydrogenase


Mass: 36002.402 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M403
#77: Protein chain 77


Mass: 23627.730 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MEX7
#79: Protein NmrA domain-containing protein


Mass: 36376.008 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24I09
#85: Protein Peptidase M16 inactive domain protein


Mass: 58023.914 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MGU2
#86: Protein M16 family peptidase, putative


Mass: 53030.543 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MJ25
#87: Protein Apocytochrome b


Mass: 50635.547 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Z1
#88: Protein Cytochrome protein c1


Mass: 37616.629 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24IM5
#89: Protein Rieske iron-sulfur protein, ubiquinol-cytochrome C reductase iron-sulfur subunit


Mass: 30696.961 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MIC7
#90: Protein Ubiquinol-cytochrome C reductase hinge protein


Mass: 9885.511 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23K66
#91: Protein UQCRTT1


Mass: 39193.523 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23F81
#94: Protein UQCRTT3


Mass: 5634.938 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#99: Protein Ymf68


Mass: 72782.539 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Y6
#102: Protein Structural protein


Mass: 27946.445 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24I72
#107: Protein CTF/NF-I domain-containing protein


Mass: 116812.750 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22CI1
#109: Protein Ymf67


Mass: 54538.531 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Y7
#110: Protein Protein phosphatase 2C, putative


Mass: 53011.297 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22FX8
#111: Protein SURF1-like protein


Mass: 47087.973 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M1Q4
#112: Protein TraB family protein


Mass: 45048.949 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23DP7
#114: Protein Oxoglutarate/malate translocator protein, putative


Mass: 40418.273 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: A4VDV3
#116: Protein Carrier protein


Mass: 37095.141 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22ZA6
#117: Protein 2-oxoglutarate/malate carrier protein


Mass: 36116.316 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23M99
#118: Protein SURF1-like protein


Mass: 35794.367 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LTZ4
#119: Protein COXTT9


Mass: 29865.686 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LY65
#120: Protein COXTT10


Mass: 28101.486 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MD70
#121: Protein 39S ribosomal protein L9, mitochondrial


Mass: 27034.711 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7X4J9
#122: Protein COXTT12,Transmembrane protein,Transmembrane protein,Transmembrane protein


Mass: 25953.754 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M3P9
#124: Protein COXTT27


Mass: 23368.416 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#125: Protein Ymf75


Mass: 23325.801 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q951A7
#126: Protein Mobilization protein


Mass: 23257.660 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23F08
#127: Protein Iron-binding zinc finger CDGSH type protein


Mass: 21476.887 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M8P0
#128: Protein COXTT28


Mass: 11121.555 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#131: Protein Decapping nuclease


Mass: 10226.719 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LVX0
#132: Protein Complex III subunit VII


Mass: 19882.758 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q230X6
#135: Protein COXTT22


Mass: 17701.115 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MFV5
#137: Protein Phage protein


Mass: 14740.897 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24C97
#139: Protein Lysozyme


Mass: 12273.913 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M9E7
#140: Protein Ymf70


Mass: 10891.920 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Y0
#142: Protein ABC transporter


Mass: 10418.697 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LTF1
#143: Protein YflT domain-containing protein


Mass: 19979.320 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M8Y9
#144: Protein Cullin domain-containing protein


Mass: 8965.917 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22N23
#146: Protein Annexin


Mass: 8155.360 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q233U0
#147: Protein Transposase


Mass: 8081.111 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22A35
#148: Protein Tim10/DDP family zinc finger protein


Mass: 8008.990 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7X3D6
#149: Protein Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,chain 150


Mass: 50912.336 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22RF2

+
Transmembrane ... , 34 types, 50 molecules A6A9B0B3B4B5BABBBDBLBMBXCMCFCKCJCNCCHhIiKkDEDeDGDgDHDh...

#7: Protein Transmembrane protein, putative


Mass: 29389.660 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24C39
#10: Protein Transmembrane protein, putative


Mass: 26545.146 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24F24
#37: Protein Transmembrane protein, putative


Mass: 11451.183 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MI60
#40: Protein Transmembrane protein, putative


Mass: 9942.366 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: A4VD20
#41: Protein Transmembrane protein, putative


Mass: 8787.116 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22DC2
#42: Protein Transmembrane protein, putative


Mass: 8445.937 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MIK1
#44: Protein Transmembrane protein


Mass: 24823.297 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MIE0
#45: Protein Transmembrane protein, putative


Mass: 24419.150 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22Z32
#47: Protein Transmembrane protein, putative


Mass: 23971.033 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LT77
#55: Protein Transmembrane protein, putative


Mass: 16909.242 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22HE4
#56: Protein Transmembrane protein, putative


Mass: 15831.701 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M9B3
#67: Protein Transmembrane protein, putative


Mass: 13340.979 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22T55
#71: Protein Transmembrane protein, putative


Mass: 9168.366 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22HD6
#76: Protein Transmembrane protein, putative


Mass: 35124.293 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q248F8
#78: Protein Transmembrane protein, putative


Mass: 11188.824 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24CW6
#80: Protein Transmembrane protein, putative


Mass: 11957.518 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23S01
#81: Protein Transmembrane protein, putative


Mass: 7244.434 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7XF00
#82: Protein Transmembrane protein


Mass: 7036.020 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23RH8
#92: Protein Transmembrane protein, putative


Mass: 15677.771 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M484
#93: Protein Transmembrane protein, putative


Mass: 14262.554 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MM45
#95: Protein Transmembrane protein, putative


Mass: 7455.741 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MFL6
#101: Protein Transmembrane protein, putative


Mass: 15618.258 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7XCY5
#103: Protein Transmembrane protein, putative


Mass: 12786.321 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23DS4
#104: Protein Transmembrane protein, putative


Mass: 16411.672 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MGF9
#106: Protein Transmembrane protein, putative


Mass: 26601.174 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7WZP1
#108: Protein Transmembrane protein, putative


Mass: 57814.465 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22PJ5
#113: Protein Transmembrane protein, putative


Mass: 41307.387 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23DG8
#123: Protein Transmembrane protein, putative


Mass: 24701.131 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LZX8
#129: Protein Transmembrane protein, putative


Mass: 20372.266 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23D87
#130: Protein Transmembrane protein


Mass: 20025.109 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MKT6
#133: Protein Transmembrane protein, putative


Mass: 18801.604 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23VY4
#134: Protein Transmembrane protein, putative


Mass: 18600.445 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22DP8
#136: Protein Transmembrane protein, putative


Mass: 15588.598 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23TE5
#138: Protein Transmembrane protein, putative


Mass: 14328.524 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22W32

+
NADH dehydrogenase subunit ... , 6 types, 6 molecules AAAEAOATB6BH

#11: Protein NADH dehydrogenase subunit 5


Mass: 88179.844 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q950Z0, NADH:ubiquinone reductase (H+-translocating)
#15: Protein NADH dehydrogenase subunit 7


Mass: 51227.477 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q951B1, NADH:ubiquinone reductase (H+-translocating)
#25: Protein NADH dehydrogenase subunit 9


Mass: 23830.291 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q950Z3, NADH:ubiquinone reductase (H+-translocating)
#30: Protein NADH dehydrogenase subunit 10


Mass: 18324.260 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q951B4, NADH:ubiquinone reductase (H+-translocating)
#43: Protein NADH dehydrogenase subunit 1


Mass: 7238.754 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q09FB0
#51: Protein NADH dehydrogenase subunit 2


Mass: 20899.889 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q951B2, NADH:ubiquinone reductase (H+-translocating)

+
NADH-ubiquinone oxidoreductase ... , 7 types, 7 molecules ABACAHAIALAUAX

#12: Protein NADH-ubiquinone oxidoreductase 75 kDa subunit


Mass: 80580.789 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23KA9
#13: Protein NADH-ubiquinone oxidoreductase chain 4


Mass: 58690.043 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q950X9, NADH:ubiquinone reductase (H+-translocating)
#18: Protein NADH-ubiquinone oxidoreductase chain 1


Mass: 32636.770 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q950Y3, NADH:ubiquinone reductase (H+-translocating)
#19: Protein NADH-ubiquinone oxidoreductase 24 kDa subunit


Mass: 31216.697 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MEP0
#22: Protein NADH-ubiquinone oxidoreductase 1, chain, putative


Mass: 28053.535 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MDW5
#31: Protein NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit


Mass: 17381.809 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LT42
#34: Protein NADH-ubiquinone oxidoreductase chain 3


Mass: 14416.898 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q950Z7, NADH:ubiquinone reductase (H+-translocating)

+
NADH dehydrogenase [ubiquinone] ... , 8 types, 10 molecules ADAPAQARBOBQDIDiDTDt

#14: Protein NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial


Mass: 52313.699 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q23KE4, NADH:ubiquinone reductase (H+-translocating)
#26: Protein NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12


Mass: 22890.570 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: A4VDQ6
#27: Protein NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial


Mass: 22698.301 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q233X7
#28: Protein NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial


Mass: 21642.377 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MK61
#58: Protein NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8


Mass: 15689.792 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23B10
#60: Protein NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4


Mass: 15193.583 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MAF0
#105: Protein NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial


Mass: 28666.662 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7X287
#115: Protein NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8, mitochondrial


Mass: 37552.980 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23DZ5

+
Gamma-carbonic ... , 2 types, 2 molecules AKAM

#21: Protein Gamma-carbonic anhydrase


Mass: 28216.734 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22XU5
#23: Protein Gamma-carbonic anhydrase


Mass: 25395.969 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M6S0

+
Acyl carrier ... , 2 types, 2 molecules AVAW

#32: Protein Acyl carrier protein


Mass: 16249.438 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22XT6
#33: Protein Acyl carrier protein


Mass: 15428.433 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MD12

+
Protein/peptide , 3 types, 4 molecules COCDLl

#83: Protein/peptide SDHTT11


Mass: 5459.540 Da / Num. of mol.: 1 / Source method: isolated from a natural source
Details: succinate dehydrogenase Tetrahymena thermophila subunit 11 GenBank: DY684362.1
Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#84: Protein/peptide succinate dehydrogenase complex iron-sulfur subunit D


Mass: 5566.625 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#96: Protein/peptide UQCRTT2


Mass: 4850.612 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210

+
Cytochrome c oxidase subunit ... , 3 types, 6 molecules DADaDBDbDDDd

#97: Protein Cytochrome c oxidase subunit 1


Mass: 80578.977 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Y4
#98: Protein Cytochrome c oxidase subunit 2


Mass: 72388.883 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Y9
#100: Protein Cytochrome C oxidase subunit Vb protein


Mass: 75431.312 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23FF5

+
Zf-Tim10 DDP domain-containing ... , 2 types, 4 molecules ETEtEXEx

#141: Protein Zf-Tim10_DDP domain-containing protein


Mass: 10435.701 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q231A8
#145: Protein Zf-Tim10_DDP domain-containing protein


Mass: 8354.574 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7XDM6

+
Non-polymers , 24 types, 384 molecules

#150: Chemical...
ChemComp-CDL / CARDIOLIPIN / DIPHOSPHATIDYL GLYCEROL / BIS-(1,2-DIACYL-SN-GLYCERO-3-PHOSPHO)-1',3'-SN-GLYCEROL


Mass: 1464.043 Da / Num. of mol.: 162 / Source method: obtained synthetically / Formula: C81H156O17P2 / Feature type: SUBJECT OF INVESTIGATION / Comment: phospholipid*YM
#151: Chemical ChemComp-UDP / URIDINE-5'-DIPHOSPHATE


Type: RNA linking / Mass: 404.161 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C9H14N2O12P2 / Comment: UDP*YM
#152: Chemical
ChemComp-MG / MAGNESIUM ION


Mass: 24.305 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: Mg
#153: Chemical...
ChemComp-PC1 / 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE / 3-SN-PHOSPHATIDYLCHOLINE


Mass: 790.145 Da / Num. of mol.: 97 / Source method: obtained synthetically / Formula: C44H88NO8P / Feature type: SUBJECT OF INVESTIGATION / Comment: phospholipid*YM
#154: Chemical ChemComp-NDP / NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE


Mass: 745.421 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C21H30N7O17P3
#155: Chemical...
ChemComp-3PE / 1,2-Distearoyl-sn-glycerophosphoethanolamine / 3-SN-PHOSPHATIDYLETHANOLAMINE / 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE


Mass: 748.065 Da / Num. of mol.: 45 / Source method: obtained synthetically / Formula: C41H82NO8P / Feature type: SUBJECT OF INVESTIGATION / Comment: phospholipid*YM
#156: Chemical
ChemComp-LPP / 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE / 1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATE / L-B,G-DIPALMITOYL-A-PHOSPHATIDIC ACID DISODIUM SALT / 3-SN-PHOSPHATIDIC ACID / 1,2-DIPALMITOYLDISODIUM SALT


Mass: 648.891 Da / Num. of mol.: 12 / Source method: obtained synthetically / Formula: C35H69O8P / Feature type: SUBJECT OF INVESTIGATION / Comment: phospholipid*YM
#157: Chemical ChemComp-ADP / ADENOSINE-5'-DIPHOSPHATE


Mass: 427.201 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: C10H15N5O10P2 / Comment: ADP, energy-carrying molecule*YM
#158: Chemical
ChemComp-FES / FE2/S2 (INORGANIC) CLUSTER


Mass: 175.820 Da / Num. of mol.: 10 / Source method: obtained synthetically / Formula: Fe2S2 / Feature type: SUBJECT OF INVESTIGATION
#159: Chemical
ChemComp-SF4 / IRON/SULFUR CLUSTER


Mass: 351.640 Da / Num. of mol.: 7 / Source method: obtained synthetically / Formula: Fe4S4 / Feature type: SUBJECT OF INVESTIGATION
#160: Chemical ChemComp-FMN / FLAVIN MONONUCLEOTIDE / RIBOFLAVIN MONOPHOSPHATE


Mass: 456.344 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C17H21N4O9P / Feature type: SUBJECT OF INVESTIGATION
#161: Chemical ChemComp-8Q1 / S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate / S-dodecanoyl-4'-phosphopantetheine


Mass: 540.651 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C23H45N2O8PS
#162: Chemical ChemComp-ZN / ZINC ION


Mass: 65.409 Da / Num. of mol.: 3 / Source method: obtained synthetically / Formula: Zn
#163: Chemical
ChemComp-CA / CALCIUM ION


Mass: 40.078 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: Ca
#164: Chemical ChemComp-FAD / FLAVIN-ADENINE DINUCLEOTIDE


Mass: 785.550 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C27H33N9O15P2 / Feature type: SUBJECT OF INVESTIGATION / Comment: FAD*YM
#165: Chemical ChemComp-F3S / FE3-S4 CLUSTER


Mass: 295.795 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: Fe3S4 / Feature type: SUBJECT OF INVESTIGATION
#166: Chemical ChemComp-HEC / HEME C


Mass: 618.503 Da / Num. of mol.: 3 / Source method: obtained synthetically / Formula: C34H34FeN4O4 / Feature type: SUBJECT OF INVESTIGATION
#167: Chemical
ChemComp-UQ8 / Ubiquinone-8 / 2,3-dimethoxy-5-methyl-6-[(6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-oc taen-1-yl]cyclohexa-2,5-diene-1,4-dione


Mass: 727.109 Da / Num. of mol.: 12 / Source method: obtained synthetically / Formula: C49H74O4 / Feature type: SUBJECT OF INVESTIGATION
#168: Chemical
ChemComp-HEM / PROTOPORPHYRIN IX CONTAINING FE / HEME


Mass: 616.487 Da / Num. of mol.: 6 / Source method: obtained synthetically / Formula: C34H32FeN4O4 / Feature type: SUBJECT OF INVESTIGATION
#169: Chemical
ChemComp-HEA / HEME-A


Mass: 852.837 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: C49H56FeN4O6 / Feature type: SUBJECT OF INVESTIGATION
#170: Chemical ChemComp-CU / COPPER (II) ION


Mass: 63.546 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: Cu / Feature type: SUBJECT OF INVESTIGATION
#171: Chemical ChemComp-CUA / DINUCLEAR COPPER ION


Mass: 127.092 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: Cu2 / Feature type: SUBJECT OF INVESTIGATION
#172: Chemical ChemComp-K / POTASSIUM ION


Mass: 39.098 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: K
#173: Chemical ChemComp-ATP / ADENOSINE-5'-TRIPHOSPHATE


Mass: 507.181 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: C10H16N5O13P3 / Comment: ATP, energy-carrying molecule*YM

+
Details

Has ligand of interestY
Has protein modificationY

-
Experimental details

-
Experiment

ExperimentMethod: ELECTRON MICROSCOPY
EM experimentAggregation state: PARTICLE / 3D reconstruction method: single particle reconstruction

-
Sample preparation

ComponentName: respiratory chain supercomplex from the ciliate Tetrahymena thermophila
Type: COMPLEX / Entity ID: #1-#149 / Source: NATURAL
Molecular weightExperimental value: NO
Source (natural)Organism: Tetrahymena thermophila SB210 (eukaryote)
Buffer solutionpH: 7.4
SpecimenEmbedding applied: NO / Shadowing applied: NO / Staining applied: NO / Vitrification applied: YES
VitrificationCryogen name: ETHANE

-
Electron microscopy imaging

Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company
MicroscopyModel: FEI TITAN KRIOS
Electron gunElectron source: FIELD EMISSION GUN / Accelerating voltage: 300 kV / Illumination mode: FLOOD BEAM
Electron lensMode: BRIGHT FIELD / Nominal defocus max: 2200 nm / Nominal defocus min: 600 nm
Image recordingElectron dose: 31 e/Å2 / Detector mode: COUNTING / Film or detector model: GATAN K2 QUANTUM (4k x 4k)

-
Processing

EM softwareName: PHENIX / Version: 1.20.1_4487 / Category: model refinement
CTF correctionType: PHASE FLIPPING AND AMPLITUDE CORRECTION
3D reconstructionResolution: 2.9 Å / Resolution method: FSC 0.143 CUT-OFF / Num. of particles: 138746 / Symmetry type: POINT
RefinementCross valid method: NONE
Refine LS restraints
Refine-IDTypeDev idealNumber
ELECTRON MICROSCOPYf_bond_d0.002409457
ELECTRON MICROSCOPYf_angle_d0.535549429
ELECTRON MICROSCOPYf_dihedral_angle_d12.965158588
ELECTRON MICROSCOPYf_chiral_restr0.05555792
ELECTRON MICROSCOPYf_plane_restr0.00367826

+
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