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Yorodumi- PDB-8ayr: Sialidases and Fucosidases of Akkermansia muciniphila are key for... -
+Open data
-Basic information
Entry | Database: PDB / ID: 8ayr | |||||||||
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Title | Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota | |||||||||
Components | Coagulation factor 5/8 type domain protein | |||||||||
Keywords | HYDROLASE / Sialidase / Neuraminidase | |||||||||
Function / homology | Function and homology information | |||||||||
Biological species | Akkermansia muciniphila (bacteria) | |||||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.7 Å | |||||||||
Authors | Sakanaka, H. / Nielsen, T.S. / Pichler, M.J. / Nordberg Karlsson, E. / Abou Hachem, M. / Morth, J.P. | |||||||||
Funding support | Denmark, Iraq, 2items
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Citation | Journal: Nat Commun / Year: 2023 Title: Sialidases and fucosidases of Akkermansia muciniphila are crucial for growth on mucin and nutrient sharing with mucus-associated gut bacteria. Authors: Shuoker, B. / Pichler, M.J. / Jin, C. / Sakanaka, H. / Wu, H. / Gascuena, A.M. / Liu, J. / Nielsen, T.S. / Holgersson, J. / Nordberg Karlsson, E. / Juge, N. / Meier, S. / Morth, J.P. / ...Authors: Shuoker, B. / Pichler, M.J. / Jin, C. / Sakanaka, H. / Wu, H. / Gascuena, A.M. / Liu, J. / Nielsen, T.S. / Holgersson, J. / Nordberg Karlsson, E. / Juge, N. / Meier, S. / Morth, J.P. / Karlsson, N.G. / Abou Hachem, M. | |||||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 8ayr.cif.gz | 646 KB | Display | PDBx/mmCIF format |
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PDB format | pdb8ayr.ent.gz | 448.7 KB | Display | PDB format |
PDBx/mmJSON format | 8ayr.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 8ayr_validation.pdf.gz | 1.5 MB | Display | wwPDB validaton report |
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Full document | 8ayr_full_validation.pdf.gz | 1.5 MB | Display | |
Data in XML | 8ayr_validation.xml.gz | 48.5 KB | Display | |
Data in CIF | 8ayr_validation.cif.gz | 65.3 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ay/8ayr ftp://data.pdbj.org/pub/pdb/validation_reports/ay/8ayr | HTTPS FTP |
-Related structure data
Related structure data | 8axiC 8axsC 8axtC C: citing same article (ref.) |
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Similar structure data | Similarity search - Function & homologyF&H Search |
-Links
-Assembly
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Noncrystallographic symmetry (NCS) | NCS domain:
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