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- PDB-7zlm: Crystal structure of SOCS2:ElonginB:ElonginC in complex with comp... -

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基本情報

登録情報

データベース: PDB / ID: 7zlm

タイトル

Crystal structure of SOCS2:ElonginB:ElonginC in complex with compound MN551

要素

Elongin-B
Elongin-C
Suppressor of cytokine signaling 2

キーワード

LIGASE / E3 ligase / suppressor of cytokine signaling

機能・相同性

機能・相同性情報

JAK pathway signal transduction adaptor activity / negative regulation of receptor signaling pathway via JAK-STAT / 1-phosphatidylinositol-3-kinase regulator activity / target-directed miRNA degradation / elongin complex / VCB complex / phosphatidylinositol 3-kinase complex / growth hormone receptor binding / Cul5-RING ubiquitin ligase complex / growth hormone receptor signaling pathway ...JAK pathway signal transduction adaptor activity / negative regulation of receptor signaling pathway via JAK-STAT / 1-phosphatidylinositol-3-kinase regulator activity / target-directed miRNA degradation / elongin complex / VCB complex / phosphatidylinositol 3-kinase complex / growth hormone receptor binding / Cul5-RING ubiquitin ligase complex / growth hormone receptor signaling pathway / Cul2-RING ubiquitin ligase complex / negative regulation of multicellular organism growth / cell surface receptor signaling pathway via JAK-STAT / Pausing and recovery of Tat-mediated HIV elongation / Tat-mediated HIV elongation arrest and recovery / phosphatidylinositol phosphate biosynthetic process / HIV elongation arrest and recovery / Pausing and recovery of HIV elongation / regulation of signal transduction / Tat-mediated elongation of the HIV-1 transcript / mammary gland alveolus development / Formation of HIV-1 elongation complex containing HIV-1 Tat / Formation of HIV elongation complex in the absence of HIV Tat / RNA Polymerase II Transcription Elongation / Formation of RNA Pol II elongation complex / Growth hormone receptor signaling / cellular response to hormone stimulus / RNA Polymerase II Pre-transcription Events / Negative regulation of FLT3 / lactation / positive regulation of neuron differentiation / Interleukin-7 signaling / transcription corepressor binding / transcription elongation by RNA polymerase II / regulation of cell growth / TP53 Regulates Transcription of DNA Repair Genes / transcription initiation at RNA polymerase II promoter / Vif-mediated degradation of APOBEC3G / insulin-like growth factor receptor binding / Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha / Inactivation of CSF3 (G-CSF) signaling / Evasion by RSV of host interferon responses / Regulation of expression of SLITs and ROBOs / Antigen processing: Ubiquitination & Proteasome degradation / positive regulation of proteasomal ubiquitin-dependent protein catabolic process / response to estradiol / protein-macromolecule adaptor activity / Neddylation / ubiquitin-dependent protein catabolic process / protein-containing complex assembly / protein ubiquitination / intracellular signal transduction / ubiquitin protein ligase binding / regulation of transcription by RNA polymerase II / negative regulation of apoptotic process / nucleoplasm / cytoplasm / cytosol
類似検索 - 分子機能

生物種

Homo sapiens (ヒト)

手法

X線回折 /

シンクロトロン /

分子置換 / 解像度: 1.79 Å

データ登録者

Ramachandran, S. / Ciulli, A. / Makukhin, N.

資金援助

European Union,

スイス, 2件

引用

ジャーナル: Nat Commun / 年: 2023
タイトル: Structure-based design of a phosphotyrosine-masked covalent ligand targeting the E3 ligase SOCS2.
著者: Ramachandran, S. / Makukhin, N. / Haubrich, K. / Nagala, M. / Forrester, B. / Lynch, D.M. / Casement, R. / Testa, A. / Bruno, E. / Gitto, R. / Ciulli, A.

履歴

登録	2022年4月15日	登録サイト: PDBE / 処理サイト: PDBE
改定 1.0	2023年4月26日	Provider: repository / タイプ: Initial release
改定 1.1	2023年10月11日	Group: Data collection / Database references / カテゴリ: chem_comp_atom / chem_comp_bond / citation / Item: _citation.pdbx_database_id_DOI / _citation.year
改定 1.2	2023年10月25日	Group: Database references / カテゴリ: citation / citation_author Item: _citation.country / _citation.journal_abbrev ..._citation.country / _citation.journal_abbrev / _citation.journal_id_CSD / _citation.journal_id_ISSN / _citation.journal_volume / _citation.page_first / _citation.page_last / _citation.pdbx_database_id_PubMed / _citation.title
改定 1.3	2024年5月1日	Group: Refinement description / カテゴリ: pdbx_initial_refinement_model

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構造の表示

構造ビューア	分子: MolmilJmol/JSmol

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ダウンロードとリンク

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ダウンロード

PDBx/mmCIF形式	7zlm.cif.gz	702.9 KB	表示	PDBx/mmCIF形式
PDB形式	pdb7zlm.ent.gz	479.7 KB	表示	PDB形式
PDBx/mmJSON形式	7zlm.json.gz		ツリー表示	PDBx/mmJSON形式
その他	その他のダウンロード

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検証レポート

文書・要旨	7zlm_validation.pdf.gz	1.5 MB	表示	wwPDB検証レポート
文書・詳細版	7zlm_full_validation.pdf.gz	1.5 MB	表示
XML形式データ	7zlm_validation.xml.gz	58.2 KB	表示
CIF形式データ	7zlm_validation.cif.gz	84.5 KB	表示
アーカイブディレクトリ	https://data.pdbj.org/pub/pdb/validation_reports/zl/7zlm ftp://data.pdbj.org/pub/pdb/validation_reports/zl/7zlm	HTTPS FTP

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関連構造データ

関連構造データ	7zlnC 7zloC 7zlpC 7zlrC 7zlsC C: 同じ文献を引用 (文献)
類似構造データ	類似検索 - 機能・相同性F&H 検索類似検索 - 機能F&H 検索類似検索 - 相同性F&H 検索

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リンク

PDBのページ	PDBj / wwPDB / NCBI
「今月の分子」の関連する項目	#240 - 2019年12月低酸素誘導因子 (Hypoxia-Inducible Factors) 類似性 (20) #60 - 2004年12月ユビキチン (Ubiquitin) 類似性 (6) #110 - 2009年2月オーキシンとTIR1ユビキチンリガーゼ (Auxin and TIR1 Ubiquitin Ligase) 類似性 (5) #218 - 2018年2月 EPSP合成酵素と除草剤 (EPSP Synthase and Weedkillers) 類似性 (5) #52 - 2004年4月成長ホルモン (Growth Hormone) 類似性 (1) #67 - 2005年7月 TATA結合タンパク質 (TATA-Binding Protein) 類似性 (1) #122 - 2010年2月エンハンセオソーム (Enhanceosome) 類似性 (2) #31 - 2002年7月 p53腫瘍抑制因子 (p53 Tumor Suppressor) 類似性 (1) #234 - 2019年6月 MDM2とがん (MDM2 and Cancer) 類似性 (2) #213 - 2017年9月サーチュイン (Sirtuins) 類似性 (1) #126 - 2010年6月上皮成長因子 (Epidermal Growth Factor) 類似性 (1) #221 - 2018年5月ヒトパピローマウイルスとワクチン (Human Papillomavirus and Vaccines) 類似性 (1)

PDBのページ

PDBj /

wwPDB /

NCBI

「今月の分子」の関連する項目

#240 - 2019年12月
低酸素誘導因子 (Hypoxia-Inducible Factors)
類似性 (20)
#60 - 2004年12月
ユビキチン (Ubiquitin)
類似性 (6)
#110 - 2009年2月
オーキシンとTIR1ユビキチンリガーゼ (Auxin and TIR1 Ubiquitin Ligase)
類似性 (5)
#218 - 2018年2月
EPSP合成酵素と除草剤 (EPSP Synthase and Weedkillers)
類似性 (5)
#52 - 2004年4月
成長ホルモン (Growth Hormone)
類似性 (1)
#67 - 2005年7月
TATA結合タンパク質 (TATA-Binding Protein)
類似性 (1)
#122 - 2010年2月
エンハンセオソーム (Enhanceosome)
類似性 (2)
#31 - 2002年7月
p53腫瘍抑制因子 (p53 Tumor Suppressor)
類似性 (1)
#234 - 2019年6月
MDM2とがん (MDM2 and Cancer)
類似性 (2)
#213 - 2017年9月
サーチュイン (Sirtuins)
類似性 (1)
#126 - 2010年6月
上皮成長因子 (Epidermal Growth Factor)
類似性 (1)
#221 - 2018年5月
ヒトパピローマウイルスとワクチン (Human Papillomavirus and Vaccines)
類似性 (1)

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集合体

登録構造単位

A: Suppressor of cytokine signaling 2

B: Elongin-B

C: Elongin-C

D: Suppressor of cytokine signaling 2

E: Elongin-B

F: Elongin-C

G: Suppressor of cytokine signaling 2

H: Elongin-B

I: Elongin-C

J: Suppressor of cytokine signaling 2

K: Elongin-B

L: Elongin-C

ヘテロ分子

176 kDa, 12 ポリマー
Omokage検索でこの集合体の類似形状データを探す (詳細)

A: Suppressor of cytokine signaling 2

B: Elongin-B

C: Elongin-C

ヘテロ分子

登録者・ソフトウェアが定義した集合体
根拠: gel filtration
44 kDa, 3 ポリマー
Omokage検索でこの集合体の類似形状データを探す (詳細)

D: Suppressor of cytokine signaling 2

E: Elongin-B

F: Elongin-C

ヘテロ分子

登録者・ソフトウェアが定義した集合体
44 kDa, 3 ポリマー
Omokage検索でこの集合体の類似形状データを探す (詳細)

G: Suppressor of cytokine signaling 2

H: Elongin-B

I: Elongin-C

ヘテロ分子

登録者・ソフトウェアが定義した集合体
44 kDa, 3 ポリマー
Omokage検索でこの集合体の類似形状データを探す (詳細)

J: Suppressor of cytokine signaling 2

K: Elongin-B

L: Elongin-C

ヘテロ分子

登録者・ソフトウェアが定義した集合体
44 kDa, 3 ポリマー
Omokage検索でこの集合体の類似形状データを探す (詳細)

単位格子

Length a, b, c (Å)	59.785, 172.879, 185.809
Angle α, β, γ (deg.)	90.000, 90.000, 90.000
Int Tables number	19
Space group name H-M	P2₁2₁2₁
Space group name Hall	P2ac2ab
Symmetry operation	#1: x,y,z #2: x+1/2,-y+1/2,-z #3: -x,y+1/2,-z+1/2 #4: -x+1/2,-y,z+1/2

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要素

#1: タンパク質	Suppressor of cytokine signaling 2 / SOCS-2 / Cytokine-inducible SH2 protein 2 / CIS-2 / STAT-induced STAT inhibitor 2 / SSI-2 分子量: 19273.268 Da / 分子数: 4 / 由来タイプ: 組換発現 / 由来: (組換発現) Homo sapiens (ヒト) / 遺伝子: SOCS2, CIS2, SSI2, STATI2 / 発現宿主: Escherichia coli BL21(DE3) (大腸菌) / 参照: UniProt: O14508
#2: タンパク質	Elongin-B / EloB / Elongin 18 kDa subunit / RNA polymerase II transcription factor SIII subunit B / SIII p18 / ...EloB / Elongin 18 kDa subunit / RNA polymerase II transcription factor SIII subunit B / SIII p18 / Transcription elongation factor B polypeptide 2 分子量: 13147.781 Da / 分子数: 4 / 由来タイプ: 組換発現 / 由来: (組換発現) Homo sapiens (ヒト) / 遺伝子: ELOB, TCEB2 / 発現宿主: Escherichia coli BL21(DE3) (大腸菌) / 参照: UniProt: Q15370
#3: タンパク質	Elongin-C / EloC / Elongin 15 kDa subunit / RNA polymerase II transcription factor SIII subunit C / SIII p15 / ...EloC / Elongin 15 kDa subunit / RNA polymerase II transcription factor SIII subunit C / SIII p15 / Transcription elongation factor B polypeptide 1 分子量: 10974.616 Da / 分子数: 4 / 由来タイプ: 組換発現 / 由来: (組換発現) Homo sapiens (ヒト) / 遺伝子: ELOC, TCEB1 / 発現宿主: Escherichia coli BL21(DE3) (大腸菌) / 参照: UniProt: Q15369
#4: 化合物	ChemComp-JIH / [4-[(2~{S})-3-[[3-(2-chloranylethanoylamino)phenyl]methylamino]-2-[2-(4-fluorophenyl)ethanoylamino]-3-oxidanylidene-propyl]phenyl] dihydrogen phosphate 分子量: 577.926 Da / 分子数: 4 / 由来タイプ: 合成 / 式: C₂₆H₂₆ClFN₃O₇P / タイプ: SUBJECT OF INVESTIGATION
#5: 水	ChemComp-HOH / water 分子量: 18.015 Da / 分子数: 919 / 由来タイプ: 天然 / 式: H₂O
研究の焦点であるリガンドがあるか	Y

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実験情報

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実験

実験	手法: X線回折 / 使用した結晶の数: 1

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試料調製

結晶	マシュー密度: 2.77 Å³/Da / 溶媒含有率: 55.53 %
結晶化	温度: 277 K / 手法: 蒸気拡散法, シッティングドロップ法詳細: 0.2 M Potassium sodium tartrate tetrahydrate, 0.1 M Bis-Tris propane 6.5, 20 % w/v PEG 3350 with seeding

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データ収集

回折	平均測定温度: 100 K / Serial crystal experiment: N
放射光源	由来: シンクロトロン / サイト: ESRF / ビームライン: MASSIF-1 / 波長: 0.966 Å
検出器	タイプ: DECTRIS PILATUS3 2M / 検出器: PIXEL / 日付: 2020年11月26日
放射	プロトコル: SINGLE WAVELENGTH / 単色(M)・ラウエ(L): M / 散乱光タイプ: x-ray
放射波長	波長: 0.966 Å / 相対比: 1
反射	解像度: 1.79→78.37 Å / Num. obs: 181660 / % possible obs: 99.3 % / 冗長度: 4.5 % / B_iso Wilson estimate: 29.52 Å² / CC_1/2: 0.991 / Net I/σ(I): 7
反射シェル	解像度: 1.79→1.82 Å / R_merge(I) obs: 1.605 / Num. unique obs: 8234 / CC_1/2: 0.351

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解析

ソフトウェア

名称	バージョン	分類
Coot		モデル構築
PHENIX	1.19.2_4158	精密化
xia2		データ削減
xia2		データスケーリング
PHASER		位相決定

精密化

構造決定の手法:

分子置換
開始モデル: SBC

解像度: 1.79→78.37 Å / SU ML: 0.2662 / 交差検証法: FREE R-VALUE / σ(F): 1.33 / 位相誤差: 21.4531
立体化学のターゲット値: GeoStd + Monomer Library + CDL v1.2

	R_factor	反射数	%反射
R_free	0.217	8980	4.95 %
R_work	0.1893	172451	-
obs	0.1907	181431	99.21 %

溶媒の処理

減衰半径: 0.9 Å / VDWプローブ半径: 1.11 Å / 溶媒モデル: FLAT BULK SOLVENT MODEL

原子変位パラメータ

B_iso mean: 37.61 Å²

精密化ステップ

サイクル: LAST / 解像度: 1.79→78.37 Å

	タンパク質	核酸	リガンド	溶媒	全体
原子数	10738	0	152	919	11809

拘束条件

Refine-ID	タイプ	Dev ideal	数
X-RAY DIFFRACTION	f_bond_d	0.0076	11175
X-RAY DIFFRACTION	f_angle_d	0.9366	15155
X-RAY DIFFRACTION	f_chiral_restr	0.059	1729
X-RAY DIFFRACTION	f_plane_restr	0.0071	1911
X-RAY DIFFRACTION	f_dihedral_angle_d	9.6184	1610

LS精密化シェル

解像度 (Å)	R_factor R_free	Num. reflection R_free	R_factor R_work	Num. reflection R_work	Refine-ID	% reflection obs (%)
1.79-1.81	0.4518	245	0.4375	4976	X-RAY DIFFRACTION	86.18
1.81-1.83	0.4717	295	0.4081	5670	X-RAY DIFFRACTION	99.43
1.83-1.85	0.3825	314	0.3624	5651	X-RAY DIFFRACTION	99.67
1.85-1.87	0.3446	306	0.3153	5767	X-RAY DIFFRACTION	99.75
1.87-1.9	0.305	279	0.2808	5690	X-RAY DIFFRACTION	99.62
1.9-1.92	0.297	295	0.2576	5742	X-RAY DIFFRACTION	99.52
1.92-1.95	0.248	293	0.2392	5724	X-RAY DIFFRACTION	99.59
1.95-1.98	0.2735	302	0.2224	5703	X-RAY DIFFRACTION	99.6
1.98-2.01	0.2352	311	0.2183	5687	X-RAY DIFFRACTION	99.5
2.01-2.05	0.2521	294	0.2069	5727	X-RAY DIFFRACTION	99.69
2.05-2.08	0.2543	296	0.2071	5754	X-RAY DIFFRACTION	99.74
2.08-2.12	0.2249	291	0.2106	5729	X-RAY DIFFRACTION	99.73
2.12-2.16	0.2605	277	0.2097	5749	X-RAY DIFFRACTION	99.65
2.16-2.2	0.2334	312	0.2128	5743	X-RAY DIFFRACTION	99.65
2.2-2.25	0.2337	309	0.2159	5712	X-RAY DIFFRACTION	99.73
2.25-2.3	0.2454	338	0.2011	5742	X-RAY DIFFRACTION	99.66
2.3-2.36	0.2369	316	0.1876	5699	X-RAY DIFFRACTION	99.8
2.36-2.42	0.2106	321	0.1912	5729	X-RAY DIFFRACTION	99.74
2.42-2.5	0.2304	293	0.1874	5825	X-RAY DIFFRACTION	99.8
2.5-2.58	0.2277	285	0.1887	5754	X-RAY DIFFRACTION	99.72
2.58-2.67	0.2096	298	0.1853	5745	X-RAY DIFFRACTION	99.46
2.67-2.78	0.2148	308	0.1869	5782	X-RAY DIFFRACTION	99.74
2.78-2.9	0.2265	258	0.1966	5855	X-RAY DIFFRACTION	99.77
2.9-3.05	0.2203	295	0.1943	5795	X-RAY DIFFRACTION	99.89
3.05-3.25	0.2263	297	0.1808	5829	X-RAY DIFFRACTION	99.84
3.25-3.5	0.1932	290	0.1738	5867	X-RAY DIFFRACTION	99.84
3.5-3.85	0.1997	287	0.1612	5860	X-RAY DIFFRACTION	99.64
3.85-4.41	0.1518	323	0.1417	5835	X-RAY DIFFRACTION	99.26
4.41-5.55	0.1876	340	0.1608	5917	X-RAY DIFFRACTION	99.41
5.55-78.37	0.2103	312	0.1877	6193	X-RAY DIFFRACTION	99.57

精密化 TLS

手法: refined / Refine-ID: X-RAY DIFFRACTION

ID	L11 (°²)	L12 (°²)	L13 (°²)	L22 (°²)	L23 (°²)	L33 (°²)	S11 (Å °)	S12 (Å °)	S13 (Å °)	S21 (Å °)	S22 (Å °)	S23 (Å °)	S31 (Å °)	S32 (Å °)	S33 (Å °)	T11 (Å²)	T12 (Å²)	T13 (Å²)	T22 (Å²)	T23 (Å²)	T33 (Å²)	Origin x (Å)	Origin y (Å)	Origin z (Å)
1	5.33721730158	4.89102789002	-5.56231555434	4.45920873452	-5.34712912243	6.77481507014	0.0661300325305	0.0589109057127	0.146327227747	0.039872455319	-0.0592145914142	0.433335602126	-0.0280255282854	-0.376604846169	0.0255729013894	0.2590941029	-0.0198883499438	-0.00785383872659	0.29514534046	-0.0361814932902	0.253815552721	-19.4833587541	-38.0098152081	-15.770183665
2	3.02018441187	-0.95875152217	0.345285678672	3.85342708034	-0.117522359926	4.52528761766	0.153511496467	-0.204944978282	-0.010606559603	0.20542362139	-0.024279811051	-0.369534277732	0.0559367930474	0.19194238211	-0.102386223947	0.144705955453	-0.0164205557991	-0.0307914506555	0.15320766062	-0.00628563120685	0.126152676004	-2.31072468458	-30.1445765071	-11.5363928691
3	3.27407297851	1.28746934954	3.8880078091	3.84219337484	2.86447792655	5.16573348908	0.169700497531	-0.93811706463	-0.296133647372	0.416860025131	-0.191039987485	0.032940637993	0.0292380757906	-0.33162476885	-0.0343629083804	0.232599616523	-0.00233888862695	-0.0244627420351	0.21931915112	0.0312962596048	0.164439133927	-9.60128932317	-30.9297342158	-5.4043408999
4	3.1088297633	-3.98636972166	1.67436886561	5.6651319146	-0.697562471023	4.82635385822	-0.0796773052869	-1.24595269711	0.138449183477	0.67291859204	-0.25045391276	0.120119713741	-0.00885679367429	-0.784851332975	0.316190854118	0.257208955415	-0.0186817071637	0.0422737457253	0.419181510125	-0.0166824748325	0.201618577104	-16.7365257704	-29.9737166959	-2.2647016716
5	6.48884579671	0.966986354027	-0.659104438745	6.79269135638	0.194400838219	4.87525653163	0.0171335419976	-0.324543504573	0.509979255522	0.385485695478	-0.0701080347383	0.460182660764	-0.338725582639	-0.294193068028	0.03658537482	0.23353131188	0.0698581518864	-0.00575779399363	0.282909569633	-0.0374660120612	0.216973622889	-17.8492739301	-23.5281281902	-10.7578317198
6	4.10154521726	0.0126527212963	0.575216034386	7.41299543305	4.75864758906	3.24072472524	0.0263855298788	-0.125544198649	0.115604361086	0.476331411893	0.0759119323563	0.00205154426532	0.180178990658	0.167065459737	-0.12458917467	0.270447380024	-0.00339302340302	0.0295851358466	0.184202643277	0.0624923743095	0.201014743071	-6.22469233564	-23.9622867842	-18.9391402021
7	6.23295317799	-2.4049930667	-1.29091961773	3.80873067471	-0.133611641642	2.89645527503	-0.0833128286725	0.335035966823	-0.269508911341	0.030455873878	-0.0293466534964	0.278771530379	0.0887241123205	-0.467641546289	0.116442918285	0.183400916811	-0.0146497942887	0.00725584136655	0.288927353158	0.00173455435395	0.150694478796	-20.9126916585	-25.4634405553	-30.1830524467
8	3.99042947112	-0.188499479734	-0.366590009382	3.71471529171	-0.638670266664	4.31025259971	-0.0429808432226	-0.205118339972	0.0107403673652	0.133045841845	0.0752814599671	-0.218945155481	0.0765641497158	0.0927239084622	-0.0295788981212	0.153486487876	0.0192017573624	-0.000658306095031	0.186955690949	-0.0367835285202	0.156400826255	6.04891810606	-19.7549927621	-46.7284247755
9	7.46229159468	1.57841885262	0.81076960189	7.27673582052	3.43772679302	7.28963602966	-0.334942603609	0.17027921971	-0.593889526909	0.198073110417	0.199444344814	-0.658727989914	0.98152189469	0.989199467892	0.102340353365	0.260881023745	0.0927735426124	0.115131563857	0.278349893953	0.0563459350145	0.324919724394	12.5739945202	-22.1795827665	-54.319180713
10	4.20081699917	-0.445709600288	-0.67977742893	5.47073054229	1.37217450019	7.15162421141	-0.164020549474	0.260044672493	0.0773374882199	-0.387927313796	0.0182535686377	-0.444077698877	0.0947563810605	0.616116183991	0.120021472532	0.212788946492	0.00961295592083	0.0413263280197	0.284152780948	0.0304661103316	0.305351486303	10.9504027334	-16.5140002551	-59.3730945322
11	2.46855883171	-2.83916829358	-0.511503567048	6.0586110473	-1.84095250114	2.36350948979	-0.133902963952	-0.472846518458	1.15100228008	0.0796400333574	-0.0589438485977	-0.672349923431	-1.11178952678	0.518416137346	0.281866092561	0.41348612101	-0.0556161206067	-0.0540303873672	0.431928140389	-0.00528594900126	0.476856116412	12.6280074099	-8.75191408863	-49.8467094085
12	4.71866860623	1.29168698612	-1.0793580822	3.69117688556	-2.13413336881	8.5562652492	0.0234242489048	-0.3858192726	0.295785809198	0.55750220847	-0.387861746527	-0.0712791361231	-1.23486379629	0.416745283109	0.247307404246	0.340409653495	0.0102021244461	-0.0966712219361	0.28549193451	-0.0687027665969	0.293867278045	11.2573032851	-14.5316418405	-39.1929468435
13	2.70358000433	0.537231035679	-0.859826532394	2.89452585374	-3.34629052094	6.83845903423	0.00555415969405	-0.0588476651488	0.168262127762	0.184508700878	0.0599837005659	-0.0846547260034	-0.339022634533	-0.305415648771	-0.142983446221	0.162102191927	0.00577374720652	-0.00689978916943	0.187552247801	-0.0183668171198	0.208825382436	3.65421169727	-16.5835280624	-47.1591304262
14	5.01203533591	-3.71900140774	-4.55224060201	3.71014516321	1.88245763017	6.55070932942	0.313487039823	2.08533672971	0.811533768292	-1.37558525528	0.0616253992541	0.152912880404	-1.06026007545	-1.63097373137	-0.325506304973	0.428493462568	0.0292784226121	0.0503924885411	0.541425277715	0.082318654761	0.345312501319	9.39469515761	-11.0663434943	-68.7244566739
15	9.54063695477	3.1772086715	-7.6815254511	2.1984684072	-2.81493669145	6.17964832755	-0.0417502697461	1.31024063358	0.253079093395	-0.106552932911	0.195334442016	0.178972501048	-0.0209761040362	-0.866419105027	-0.318407134365	0.221246774062	0.0510879767061	-0.00412618939042	0.326236552316	0.0574724628962	0.275513253675	-1.49272911106	-11.1695821382	-55.6892135839
16	3.04528464522	-5.18712909926	-4.07419066108	8.85985795322	6.97451029981	5.49591187908	0.906053413304	0.338638344497	1.44410261436	0.206679132826	0.202453483643	0.943174606161	-1.45141601506	-1.85055307035	-0.880034084539	0.342655624077	0.14571784674	0.130205710816	0.501083395419	0.0795797563757	0.415359991415	-19.8979610198	-12.127229809	-42.0053606375
17	2.25352132358	-3.41100549398	-3.4803840768	7.69890429924	6.90384152618	6.42987139765	0.182712333463	0.160816513334	0.713589468276	-0.286391284677	0.341368477855	1.43003256478	-1.26740421665	-1.87407711805	-0.200351545196	0.385023061544	0.290601879176	0.168067507082	0.778964528227	0.194796826488	0.777745532429	-24.6358844605	-12.831218616	-33.0471109944
18	2.73933833497	-1.6273204678	4.40246557548	8.77502778951	-1.77579962512	7.25767861739	-0.0932439766375	0.864175617458	-0.341019725392	-0.151932389982	-0.0870651629526	-0.453524237523	0.616126112308	0.234790768267	0.127629699429	0.290117820686	0.00112429571908	0.0262438619824	0.288012232994	0.00411833581522	0.181301193848	-0.710927718137	-30.234690797	-52.4640623009
19	5.84938822329	-0.600056795532	0.0900854013948	4.01646476868	-1.62468098618	4.74695333653	-0.126345975186	0.432954311193	-0.479866698823	-0.195325503187	0.00450303957893	0.00660791631922	0.334713061582	-0.117438988115	0.0956187739375	0.202798487293	-0.0409919256298	0.0230344421481	0.224557060088	-0.0829692094874	0.162351958122	-5.14075081696	-29.7670069632	-48.5070775004
20	5.6551745642	3.04851576609	-0.300068404088	5.90228095612	3.42313996422	5.36028602378	-0.0500244037302	0.729689074522	0.180937336316	-0.434446527463	-0.00336752463043	0.190583247826	0.496061252005	-1.00322591681	0.0433785826878	0.281884078704	-0.112167497582	-0.040957634806	0.393405411987	0.00297804011751	0.171746819412	-12.6416617923	-29.2226936817	-52.8658742071
21	5.73034861487	-3.02678033182	1.28737324465	6.10776627834	-1.77478640477	3.81174010763	-0.15247177969	-0.0965940777264	-0.0126357352343	0.137353176225	0.131378618026	-0.176094899618	0.0756100386486	-0.0737311463499	0.052369844789	0.186715981032	0.00329301517192	0.0094827210812	0.231528943381	-0.0163887679649	0.134277661117	-4.31450409715	-25.2868165242	-39.7018389088
22	4.69751354633	0.931241354151	2.88209187977	4.42276708629	-1.02966360262	8.02000993875	0.356418353179	-0.658451580459	-0.263080576214	0.337642661191	-0.200406129788	-0.458432226706	0.646781374109	0.300292870169	-0.047704857008	0.284951571949	0.000498018330006	-0.0203103380973	0.296744478495	0.0532303900279	0.24359119456	-1.07508097509	-25.4205687145	-29.769057239
23	3.99114401742	-0.647334093745	-0.709880194616	8.18004383286	2.74645772709	5.17612787249	0.107999703394	0.444107939555	0.04293067275	0.116295924379	-0.173451137246	0.175341469207	0.1572959248	-0.637924626536	0.0894638642651	0.169289832489	-0.0242726456751	0.00928748605201	0.371324785515	0.0152227210274	0.133602104487	-15.892745242	-25.6007263835	-39.8490711367
24	9.16909356409	-3.91074648001	-5.60834030354	3.9785168164	3.78672107023	4.52855816058	0.142124164426	0.223125928898	-0.298290920983	-0.206504658084	-0.152024470867	0.189469745631	-0.232928839029	-0.519438369126	-0.0756723603949	0.380480483899	-0.0101610472736	0.0212704391486	0.263134921102	0.0601788923806	0.275284593576	-5.48653140036	28.4876363519	0.296772164766
25	4.39394528472	2.18711651764	0.126259907629	6.34139313665	-0.773578749922	2.95562237951	0.253268383155	-0.221389954229	0.00865411082798	0.138341396721	-0.253540110992	-0.392829608133	-0.222834884406	0.254301526427	-0.0159662107436	0.278517012805	-0.0351223613919	0.0428511559049	0.139427687456	-0.011246065282	0.248632086764	10.705843729	33.2838607193	-8.51410680097
26	6.49121317882	0.100259908924	-0.74585893786	2.74096588931	0.496994771677	3.11268639315	0.131438138904	0.201869469039	0.363269131637	-0.256241812279	0.0268307741873	0.333140847609	-0.374050842488	-0.252785611426	-0.138439977003	0.321866454041	0.00885680008539	0.0216229094762	0.15875456079	0.0379154996732	0.268084880393	-2.45669114534	37.4183676784	-10.8875628264
27	4.20288150112	0.130950066912	0.680445790965	5.54834338711	0.609588837686	1.93295183716	-0.0544155860976	-0.0242054911018	-0.36327036077	0.301001170877	-0.048197954523	0.785419990217	-0.151166913481	-0.331350469564	0.0427603877148	0.298793058558	0.0110070688713	0.0792830884564	0.228850002157	-0.0915749459708	0.340441466761	-4.52221686016	18.1827087095	-13.6247706648
28	4.53477639402	5.85044480318	1.58629305217	7.75722915157	2.3398987921	7.56407695545	0.12371828965	-0.00784371589537	0.757407697625	0.315828832073	-0.0146379482753	-0.796010000534	-0.399086425615	0.341832032216	-0.113144260769	0.170398798111	0.00288544784188	-0.0356444331034	0.216511747676	-0.0785976090753	0.465946513328	17.9270435652	0.407595778431	-21.7025192921
29	3.93448210245	-0.971422726691	-1.1108684089	0.463611384633	-0.428243780713	3.22494758587	0.110018323025	0.0231996490406	0.366121147819	0.206002415113	0.180450846446	-0.850117022082	-0.138566930111	0.593365864184	-0.118798698036	0.211791451315	-0.0153942429285	-0.0181544971739	0.26942153269	-0.0884851281653	0.551740571858	19.6940715126	-1.47726930332	-20.5742140381
30	6.75434906286	0.923326606621	-0.846890866325	6.52058863485	-1.38049534038	8.63270218106	-0.344840046506	-0.8008852661	0.425510573304	0.924136997268	0.396932652963	-1.16341823422	0.0157391769163	1.02935689252	0.00747458758425	0.255834597316	0.0907759718348	-0.0792770414844	0.387394382446	-0.120227894062	0.399812436425	25.9085716379	-7.9473843408	-19.6249706579
31	5.03848864899	-1.6422586211	1.35726082198	8.49189470771	-0.669810223241	4.11034499879	-0.0450789810365	0.00649049146906	0.166347004162	0.348997289546	0.0794147014068	-0.702962867442	0.173617493034	0.470561080392	-0.0368081858947	0.191596308268	0.0378873237711	-0.0242375728451	0.335558068892	-0.0394848887038	0.287690438033	24.1583326383	-12.6194385779	-25.5500364415
32	5.70435033804	1.77986841175	3.38861662663	7.27020246959	0.681813497815	5.48756994334	0.21165158633	0.993940933299	1.28866410495	-1.02085757874	-0.266914722929	-1.1398843695	-0.366206115798	0.701294355081	0.0758240387095	0.35608573237	0.0327761268096	0.147361266909	0.49796320357	0.125460567848	0.646460677954	25.7085651778	-2.15231818246	-32.3661858443
33	4.48771159428	-5.14833728065	-0.576536136671	6.0155352749	0.0649692024084	3.15849589836	0.807255380976	0.0780930193369	1.34234537534	-0.267934561018	-0.319331361754	-1.13006937524	-0.606868848744	0.214018408877	-0.452405190666	0.40214191118	-0.153980309591	0.0513334795954	0.441769716546	0.0172831715899	0.961936111824	25.7829332566	6.39143822205	-26.8866620707
34	8.64929944088	-4.00102356751	-6.22779659215	5.16654750985	6.78086595335	9.22912021861	0.892664629668	-0.077685560975	0.893125110328	-0.143347987827	-0.0269993077214	-1.51770328858	-1.36359629957	0.121001698811	-0.898326872101	0.345998731269	-0.0473128812959	0.049227294604	0.232671229099	-0.025997188253	0.508666146739	15.2304184881	9.23610008461	-21.7212399476
35	4.26465799757	-3.77887790022	-0.326983176999	5.50203044963	-1.038550001	0.830676573208	0.228996990047	0.515784225161	-0.268869621333	-0.0649616038984	-0.539946925212	0.409382788157	-0.0244632483685	0.0823735877474	0.320874707832	0.179899769699	0.0171995004016	-0.0180395684783	0.322357800222	-0.0469169382404	0.299501670619	20.1106167799	-12.5102872045	-28.647803924
36	3.17361240939	-0.800719133933	-4.37122241567	4.35585679688	3.66172078854	7.51258325403	0.0857084580955	0.61214555276	-0.854173853374	-0.0124392991848	-0.500972785949	0.736413766749	-0.0446418043998	-0.296684609916	0.463744919015	0.20508638742	-0.0210811171858	-0.0308268354395	0.29700713132	-0.0682435944342	0.287337649232	11.3184158927	-9.19289901677	-30.063233061
37	6.63520937021	-4.26042216046	3.46795382961	2.75953467577	-2.24291057921	1.82530404107	0.363895674956	1.19259411423	0.0610423125416	-1.47193085875	-0.672994320852	1.94642878293	-0.175075544279	-0.461867720287	0.0697324032132	0.363316477456	0.0972477438474	-0.190754587854	0.531551787209	-0.173714904079	0.830788267971	-7.57372855976	3.82909825363	-27.0610835058
38	4.48481688206	-1.06790335282	6.49341668606	4.72946538985	-1.21845491278	9.41760335772	-0.137707425199	0.0686551822409	-0.0226981310543	-0.522948510345	-0.748027573005	0.537288409511	-0.438379479129	-0.17240443865	0.818213022106	0.497697114557	0.162590673028	-0.220149413678	0.549015168793	-0.185857562423	0.737697808298	-12.5319654971	12.2638249715	-24.9201259881
39	5.11653337005	-1.27551803501	-1.34244845489	5.81138866602	1.98605941486	6.80136384979	-0.356763913974	-0.360028614776	-0.237651774217	1.1032275152	0.389590022514	0.0104313928497	0.583189124559	0.612511901953	-0.0366679765875	0.446158704034	0.0432596535249	0.00260901407855	0.17787694444	-0.00334313089493	0.264771751104	9.42977655645	-4.26254956362	-10.9337379846
40	8.60335329665	0.509138786553	4.47131136069	3.96782705895	-4.65062678338	8.46335435552	-0.15436154127	0.547382322715	-0.088997750182	0.684505044447	-0.419684747606	0.0531890240888	0.985147740096	0.30608402833	0.497318352614	0.609519419581	-0.0270299821846	0.186866387646	0.223933410748	-0.0700782156584	0.421328155436	1.42881284077	-7.95840768802	-11.1526569724
41	7.0547201907	1.06618619092	3.08462604828	6.15996260245	2.30886749079	7.18850054053	-0.313435774373	0.111449063332	0.494729688238	0.3121519422	0.135262847103	0.0570212896392	-0.122582849622	0.180462958992	0.204663288034	0.264598363802	-0.00318796181758	0.00794172751807	0.154668785755	-0.0258245917122	0.335304915358	8.17204784767	4.97901382351	-14.9391608337
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72	6.0471601717	-0.457806003522	1.52751488813	2.52069093027	-0.231228283877	2.74442692155	-0.0434227402019	0.237943677032	0.464197132744	-0.0151506887799	-0.0427736331033	-0.210049627329	0.0729077937314	0.18818511386	0.0460362256547	0.216960199175	-0.00182024432046	0.0312038404736	0.161658171408	0.0276635352572	0.270570680792	-6.61228740369	5.31645061935	-67.6544689393
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78	8.28245202404	4.57183484381	-0.812304273821	4.33213192248	1.77480374714	3.05731095246	0.423826907808	-0.806128461083	2.50099495819	0.973534789658	-0.566968140128	1.73045833716	-1.43216385537	-0.0635902016855	-0.000462458311275	0.499556552954	-0.00885828233127	0.00336565478978	0.486799231243	-0.107648263951	0.922743073608	-4.01008474277	26.6298432142	-58.6640458118
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81	6.67605155721	-0.539129439093	3.04575271404	6.32452585421	-0.37876013865	1.58633408451	-0.269663580468	0.437707574084	1.15282077342	-0.368106387378	0.14746967149	0.326763118588	-0.345720117323	-0.0731402487391	0.0474639104535	0.280129198989	-0.00610158166468	-0.0842190097355	0.176315928785	0.0418552157757	0.316457332013	-18.0232872611	10.2143060251	-74.027440926
82	3.9399959371	2.33209574105	2.50740343565	5.94630054236	1.70819041939	6.81169059739	-0.443083984867	0.676944948484	0.394115755118	-0.949157950052	0.150753964892	0.323562914181	-0.628483213223	0.456627551718	0.25016970874	0.34234315768	-0.00641419458868	-0.0447935972973	0.286025212131	0.0851829263315	0.260161141383	-16.8699190209	4.258433334	-80.1246260854
83	7.68642602404	1.14879392092	-1.99915974711	6.8533887088	-3.67448886858	2.37879378561	-0.335250878461	-0.379009191254	0.803408792537	-0.184946970074	-0.323147190948	-0.198263403813	-0.768026971128	0.529775495591	0.639366093576	0.346578054434	-0.00675471213749	-0.110102872437	0.287171794968	0.0382284114829	0.455930066656	-25.1634670474	9.98303982105	-76.7928745674
84	7.0915314115	-0.886184245673	-2.26440266232	6.07255425494	1.3102214779	7.07030141005	-0.201941515449	0.0214898351182	-0.055376020159	-0.0504396674156	0.00741894537896	-0.0144740274138	0.130165881157	0.175811400279	0.178575597859	0.163575505135	0.00168222221596	0.00145111907206	0.149554118656	0.0165907243862	0.18321310098	-17.3450581991	-3.00814124057	-72.3559438774
85	1.53920829531	-2.43742706189	0.355114848979	7.58466304151	0.929044555191	7.5609679958	0.627853086646	0.485199467862	-0.0936178164568	-0.515594187937	-0.255651163422	-0.837983863813	0.226680566996	0.128869835388	-0.293680393212	0.24305559949	0.00373785341797	0.0205154473267	0.256938250796	-0.0669965722278	0.325743066536	-14.2560139229	-12.8018701921	-71.4145424113
86	6.75435213755	1.24073957926	-0.988866001297	8.61503114365	-3.79214408907	8.35924815319	0.10185517136	-0.0778009100363	0.753137387268	-0.192398860451	0.0108533090639	0.86423438471	-0.0303380653136	-0.0577348771333	-0.0875288841692	0.150669411138	0.0203039415755	-0.0367412698816	0.188697231314	-0.0325639349432	0.354285984145	-28.9345631653	-3.04078368005	-72.7876881927

精密化 TLSグループ

Refine-ID: X-RAY DIFFRACTION

ID	Refine TLS-ID	Selection details	Auth asym-ID	Label asym-ID	Auth seq-ID	Label seq-ID
1	1	chain 'A' and (resid 30 through 46 )	A	A	30 - 46	1 - 17
2	2	chain 'A' and (resid 47 through 90 )	A	A	47 - 90	18 - 61
3	3	chain 'A' and (resid 91 through 100 )	A	A	91 - 100	62 - 71
4	4	chain 'A' and (resid 101 through 112 )	A	A	101 - 112	72 - 83
5	5	chain 'A' and (resid 113 through 134 )	A	A	113 - 134	84 - 105
6	6	chain 'A' and (resid 135 through 162 )	A	A	135 - 162	106 - 120
7	7	chain 'A' and (resid 163 through 198 )	A	A	163 - 198	121 - 156
8	8	chain 'B' and (resid 1 through 23 )	B	B	1 - 23	1 - 23
9	9	chain 'B' and (resid 24 through 35 )	B	B	24 - 35	24 - 35
10	10	chain 'B' and (resid 36 through 45 )	B	B	36 - 45	36 - 45
11	11	chain 'B' and (resid 46 through 55 )	B	B	46 - 55	46 - 55
12	12	chain 'B' and (resid 56 through 68 )	B	B	56 - 68	56 - 68
13	13	chain 'B' and (resid 69 through 79 )	B	B	69 - 79	69 - 79
14	14	chain 'B' and (resid 80 through 84 )	B	B	80 - 84	80 - 84
15	15	chain 'B' and (resid 85 through 94 )	B	B	85 - 94	85 - 94
16	16	chain 'B' and (resid 95 through 99 )	B	B	95 - 99	95 - 99
17	17	chain 'B' and (resid 100 through 104 )	B	B	100 - 104	100 - 104
18	18	chain 'C' and (resid 16 through 22 )	C	C	16 - 22	1 - 7
19	19	chain 'C' and (resid 23 through 44 )	C	C	23 - 44	8 - 29
20	20	chain 'C' and (resid 45 through 66 )	C	C	45 - 66	30 - 39
21	21	chain 'C' and (resid 67 through 83 )	C	C	67 - 83	40 - 56
22	22	chain 'C' and (resid 84 through 96 )	C	C	84 - 96	57 - 69
23	23	chain 'C' and (resid 97 through 112 )	C	C	97 - 112	70 - 85
24	24	chain 'D' and (resid 30 through 46 )	D	D	30 - 46	1 - 17
25	25	chain 'D' and (resid 47 through 90 )	D	D	47 - 90	18 - 61
26	26	chain 'D' and (resid 91 through 134 )	D	D	91 - 134	62 - 104
27	27	chain 'D' and (resid 135 through 198 )	D	D	135 - 198	105 - 156
28	28	chain 'E' and (resid 1 through 9 )	E	E	1 - 9	1 - 9
29	29	chain 'E' and (resid 10 through 23 )	E	E	10 - 23	10 - 23
30	30	chain 'E' and (resid 24 through 35 )	E	E	24 - 35	24 - 35
31	31	chain 'E' and (resid 36 through 45 )	E	E	36 - 45	36 - 45
32	32	chain 'E' and (resid 46 through 55 )	E	E	46 - 55	46 - 55
33	33	chain 'E' and (resid 56 through 65 )	E	E	56 - 65	56 - 65
34	34	chain 'E' and (resid 66 through 72 )	E	E	66 - 72	66 - 72
35	35	chain 'E' and (resid 73 through 84 )	E	E	73 - 84	73 - 84
36	36	chain 'E' and (resid 85 through 94 )	E	E	85 - 94	85 - 94
37	37	chain 'E' and (resid 95 through 99 )	E	E	95 - 99	95 - 99
38	38	chain 'E' and (resid 100 through 104 )	E	E	100 - 104	100 - 104
39	39	chain 'F' and (resid 17 through 44 )	F	F	17 - 44	1 - 28
40	40	chain 'F' and (resid 45 through 66 )	F	F	45 - 66	29 - 38
41	41	chain 'F' and (resid 67 through 82 )	F	F	67 - 82	39 - 54
42	42	chain 'F' and (resid 83 through 96 )	F	F	83 - 96	55 - 68
43	43	chain 'F' and (resid 97 through 112 )	F	F	97 - 112	69 - 84
44	44	chain 'G' and (resid 30 through 45 )	G	G	30 - 45	1 - 16
45	45	chain 'G' and (resid 46 through 100 )	G	G	46 - 100	17 - 71
46	46	chain 'G' and (resid 101 through 112 )	G	G	101 - 112	72 - 83
47	47	chain 'G' and (resid 113 through 134 )	G	G	113 - 134	84 - 105
48	48	chain 'G' and (resid 135 through 174 )	G	G	135 - 174	106 - 131
49	49	chain 'G' and (resid 175 through 198 )	G	G	175 - 198	132 - 155
50	50	chain 'H' and (resid 1 through 23 )	H	H	1 - 23	1 - 23
51	51	chain 'H' and (resid 24 through 35 )	H	H	24 - 35	24 - 35
52	52	chain 'H' and (resid 36 through 41 )	H	H	36 - 41	36 - 41
53	53	chain 'H' and (resid 42 through 50 )	H	H	42 - 50	42 - 50
54	54	chain 'H' and (resid 51 through 60 )	H	H	51 - 60	51 - 60
55	55	chain 'H' and (resid 61 through 68 )	H	H	61 - 68	61 - 68
56	56	chain 'H' and (resid 69 through 78 )	H	H	69 - 78	69 - 78
57	57	chain 'H' and (resid 79 through 86 )	H	H	79 - 86	79 - 83
58	58	chain 'H' and (resid 87 through 96 )	H	H	87 - 96	84 - 93
59	59	chain 'H' and (resid 97 through 104 )	H	H	97 - 104	94 - 101
60	60	chain 'I' and (resid 17 through 38 )	I	I	17 - 38	1 - 22
61	61	chain 'I' and (resid 39 through 66 )	I	I	39 - 66	23 - 39
62	62	chain 'I' and (resid 67 through 82 )	I	I	67 - 82	40 - 55
63	63	chain 'I' and (resid 83 through 96 )	I	I	83 - 96	56 - 69
64	64	chain 'I' and (resid 97 through 112 )	I	I	97 - 112	70 - 85
65	65	chain 'J' and (resid 30 through 46 )	J	J	30 - 46	1 - 17
66	66	chain 'J' and (resid 47 through 90 )	J	J	47 - 90	18 - 61
67	67	chain 'J' and (resid 91 through 133 )	J	J	91 - 133	62 - 104
68	68	chain 'J' and (resid 134 through 162 )	J	J	134 - 162	105 - 119
69	69	chain 'J' and (resid 163 through 184 )	J	J	163 - 184	120 - 141
70	70	chain 'J' and (resid 185 through 198 )	J	J	185 - 198	142 - 155
71	71	chain 'K' and (resid 1 through 9 )	K	K	1 - 9	1 - 9
72	72	chain 'K' and (resid 10 through 23 )	K	K	10 - 23	10 - 23
73	73	chain 'K' and (resid 24 through 35 )	K	K	24 - 35	24 - 35
74	74	chain 'K' and (resid 36 through 45 )	K	K	36 - 45	36 - 45
75	75	chain 'K' and (resid 46 through 55 )	K	K	46 - 55	46 - 55
76	76	chain 'K' and (resid 56 through 65 )	K	K	56 - 65	56 - 65
77	77	chain 'K' and (resid 66 through 79 )	K	K	66 - 79	66 - 79
78	78	chain 'K' and (resid 80 through 84 )	K	K	80 - 84	80 - 84
79	79	chain 'K' and (resid 85 through 94 )	K	K	85 - 94	85 - 94
80	80	chain 'K' and (resid 95 through 104 )	K	K	95 - 104	95 - 104
81	81	chain 'L' and (resid 16 through 27 )	L	L	16 - 27	1 - 12
82	82	chain 'L' and (resid 28 through 45 )	L	L	28 - 45	13 - 30
83	83	chain 'L' and (resid 46 through 66 )	L	L	46 - 66	31 - 40
84	84	chain 'L' and (resid 67 through 83 )	L	L	67 - 83	41 - 57
85	85	chain 'L' and (resid 84 through 96 )	L	L	84 - 96	58 - 70
86	86	chain 'L' and (resid 97 through 112 )	L	L	97 - 112	71 - 86

+
万見について

-
お知らせ

-
2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

EMDBのヘッダファイルのバージョン3が、公式のフォーマットとなりました。
これまでは公式だったバージョン1.9は、アーカイブから削除されます。

関連情報:EMDBヘッダ

外部リンク:wwPDBはEMDBデータモデルのバージョン3へ移行します

-
2020年8月12日: 新型コロナ情報

新型コロナ情報

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

新ページ: EM Navigatorに新型コロナウイルスの特設ページを開設しました。

関連情報:Covid-19情報 / 2020年3月5日: 新型コロナウイルスの構造データ

+
2020年3月5日: 新型コロナウイルスの構造データ

+
2019年1月31日: EMDBのIDの桁数の変更

+
2017年7月12日: PDB大規模アップデート

すべてのお知らせ

-
万見 (Yorodumi)

幾万の構造データを、幾万の視点から

万見(Yorodumi)は、EMDB/PDB/SASBDBなどの構造データを閲覧するためのページです。
EM Navigatorの詳細ページの後継、Omokage検索のフロントエンドも兼ねています。

関連情報:EMDB / PDB / SASBDB / 3つのデータバンクの比較 / 万見検索 / 2016年8月31日: 新しいEM Navigatorと万見 / 万見文献 / Jmol/JSmol / 機能・相同性情報 / 新しいEM Navigatorと万見の変更点

他の情報も見る

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ムービー

-
構造ビューア

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ビューアのログ

-
このページ

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このウェブサイト

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オプション

+
データを開く

-
基本情報

-
構造の表示

-
ダウンロードとリンク

-
ダウンロード

-
検証レポート

-
関連構造データ

-
リンク

-
集合体

-
要素

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実験情報

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実験

-
試料調製

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データ収集

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解析

+
万見について

-
お知らせ

-
2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

-
2020年8月12日: 新型コロナ情報

+
2020年3月5日: 新型コロナウイルスの構造データ

+
2019年1月31日: EMDBのIDの桁数の変更

+
2017年7月12日: PDB大規模アップデート

-
万見 (Yorodumi)

-ムービー

-構造ビューア

+ビューアのログ

-このページ

-このウェブサイト

-オプション

+データを開く

-基本情報

-構造の表示

-ダウンロードとリンク

-ダウンロード

-検証レポート

-関連構造データ

-リンク

-集合体

-要素

-実験情報

-実験

-試料調製

-データ収集

-解析

+万見について

-お知らせ

-2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

-2020年8月12日: 新型コロナ情報

+2020年3月5日: 新型コロナウイルスの構造データ

+2019年1月31日: EMDBのIDの桁数の変更

+2017年7月12日: PDB大規模アップデート

-万見 (Yorodumi)

-
ムービー

-
構造ビューア

+
ビューアのログ

-
このページ

-
このウェブサイト

-
オプション

+
データを開く

-
基本情報

-
構造の表示

-
ダウンロードとリンク

-
ダウンロード

-
検証レポート

-
関連構造データ

-
リンク

-
集合体

-
要素

-
実験情報

-
実験

-
試料調製

-
データ収集

-
解析

+
万見について

-
お知らせ

-
2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

-
2020年8月12日: 新型コロナ情報

+
2020年3月5日: 新型コロナウイルスの構造データ

+
2019年1月31日: EMDBのIDの桁数の変更

+
2017年7月12日: PDB大規模アップデート

-
万見 (Yorodumi)